FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1163, 580 aa
  1>>>pF1KE1163 580 - 580 aa - 580 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2099+/-0.000902; mu= 10.2905+/- 0.055
 mean_var=108.0080+/-21.399, 0's: 0 Z-trim(109.2): 12  B-trim: 11 in 1/51
 Lambda= 0.123409
 statistics sampled from 10725 (10731) to 10725 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.33), width:  16
 Scan time:  3.130

The best scores are:                                      opt bits E(32554)
CCDS32044.1 METTL3 gene_id:56339|Hs108|chr14       ( 580) 3903 705.7  4e-203


>>CCDS32044.1 METTL3 gene_id:56339|Hs108|chr14            (580 aa)
 initn: 3903 init1: 3903 opt: 3903  Z-score: 3760.1  bits: 705.7 E(32554): 4e-203
Smith-Waterman score: 3903; 99.8% identity (100.0% similar) in 580 aa overlap (1-580:1-580)

               10        20        30        40        50        60
pF1KE1 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE1 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV
              490       500       510       520       530       540

              550       560       570       580
pF1KE1 QPNWITLGNQLDGIHLLDPDVVARFKQKYPDGIISKPKNL
       :::::::::::::::::::::::::::.::::::::::::
CCDS32 QPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL
              550       560       570       580




580 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 16:44:57 2016 done: Mon Nov  7 16:44:58 2016
 Total Scan time:  3.130 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]