FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1650, 164 aa
  1>>>pF1KE1650 164 - 164 aa - 164 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6796+/-0.000273; mu= 10.6173+/- 0.017
 mean_var=68.8021+/-13.811, 0's: 0 Z-trim(118.9): 20  B-trim: 1387 in 1/53
 Lambda= 0.154623
 statistics sampled from 32334 (32354) to 32334 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.379), width:  16
 Scan time:  5.850

The best scores are:                                      opt bits E(85289)
NP_001014358 (OMIM: 609509) interleukin-31 precurs ( 164) 1076 248.1 4.6e-66


>>NP_001014358 (OMIM: 609509) interleukin-31 precursor [  (164 aa)
 initn: 1076 init1: 1076 opt: 1076  Z-score: 1307.1  bits: 248.1 E(85289): 4.6e-66
Smith-Waterman score: 1076; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KE1 MASHSGPSTSVLFLFCCLGGWLASHTLPVRLLRPSDDVQKIVEELQSLSKMLLKDVEEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASHSGPSTSVLFLFCCLGGWLASHTLPVRLLRPSDDVQKIVEELQSLSKMLLKDVEEEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 GVLVSQNYTLPCLSPDAQPPNNIHSPAIRAYLKTIRQLDNKSVIDEIIEHLDKLIFQDAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVLVSQNYTLPCLSPDAQPPNNIHSPAIRAYLKTIRQLDNKSVIDEIIEHLDKLIFQDAP
               70        80        90       100       110       120

              130       140       150       160    
pF1KE1 ETNISVPTDTHECKRFILTISQQFSECMDLALKSLTSGAQQATT
       ::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETNISVPTDTHECKRFILTISQQFSECMDLALKSLTSGAQQATT
              130       140       150       160    




164 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  9 12:21:46 2016 done: Wed Nov  9 12:21:47 2016
 Total Scan time:  5.850 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]