FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1810, 327 aa 1>>>pF1KE1810 327 - 327 aa - 327 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2415+/-0.000371; mu= 16.4902+/- 0.023 mean_var=68.4172+/-13.814, 0's: 0 Z-trim(114.1): 10 B-trim: 1042 in 1/50 Lambda= 0.155057 statistics sampled from 23786 (23796) to 23786 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.279), width: 16 Scan time: 7.250 The best scores are: opt bits E(85289) NP_115690 (OMIM: 616359) 2-methoxy-6-polyprenyl-1, ( 327) 2212 503.7 2.1e-142 XP_006719702 (OMIM: 616359) PREDICTED: 2-methoxy-6 ( 246) 1653 378.6 7.3e-105 >>NP_115690 (OMIM: 616359) 2-methoxy-6-polyprenyl-1,4-be (327 aa) initn: 2212 init1: 2212 opt: 2212 Z-score: 2677.6 bits: 503.7 E(85289): 2.1e-142 Smith-Waterman score: 2212; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327) 10 20 30 40 50 60 pF1KE1 MAAPGSCALWSYCGRGWSRAMRGCQLLGLRSSWPGDLLSARLLSQEKRAAETHFGFETVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MAAPGSCALWSYCGRGWSRAMRGCQLLGLRSSWPGDLLSARLLSQEKRAAETHFGFETVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 EEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 AFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 AFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 KQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 RFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDM 250 260 270 280 290 300 310 320 pF1KE1 IEDAGFHKVTYESLTSGIVAIHSGFKL ::::::::::::::::::::::::::: NP_115 IEDAGFHKVTYESLTSGIVAIHSGFKL 310 320 >>XP_006719702 (OMIM: 616359) PREDICTED: 2-methoxy-6-pol (246 aa) initn: 1653 init1: 1653 opt: 1653 Z-score: 2003.6 bits: 378.6 E(85289): 7.3e-105 Smith-Waterman score: 1653; 100.0% identity (100.0% similar) in 246 aa overlap (82-327:1-246) 60 70 80 90 100 110 pF1KE1 THFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLL :::::::::::::::::::::::::::::: XP_006 MNDMMSLGIHRVWKDLLLWKMHPLPGTQLL 10 20 30 120 130 140 150 160 170 pF1KE1 DVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCD 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE1 INKEMLKVGKQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 INKEMLKVGKQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQE 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE1 AHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRF 160 170 180 190 200 210 300 310 320 pF1KE1 PSQEEFKDMIEDAGFHKVTYESLTSGIVAIHSGFKL :::::::::::::::::::::::::::::::::::: XP_006 PSQEEFKDMIEDAGFHKVTYESLTSGIVAIHSGFKL 220 230 240 327 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:25:17 2016 done: Sun Nov 6 12:25:18 2016 Total Scan time: 7.250 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]