FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1810, 327 aa 1>>>pF1KE1810 327 - 327 aa - 327 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4678+/-0.000815; mu= 15.0356+/- 0.049 mean_var=65.7294+/-13.374, 0's: 0 Z-trim(107.3): 16 B-trim: 494 in 1/50 Lambda= 0.158196 statistics sampled from 9475 (9480) to 9475 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.291), width: 16 Scan time: 2.510 The best scores are: opt bits E(32554) CCDS31912.1 COQ5 gene_id:84274|Hs108|chr12 ( 327) 2212 513.5 9.2e-146 >>CCDS31912.1 COQ5 gene_id:84274|Hs108|chr12 (327 aa) initn: 2212 init1: 2212 opt: 2212 Z-score: 2730.4 bits: 513.5 E(32554): 9.2e-146 Smith-Waterman score: 2212; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327) 10 20 30 40 50 60 pF1KE1 MAAPGSCALWSYCGRGWSRAMRGCQLLGLRSSWPGDLLSARLLSQEKRAAETHFGFETVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MAAPGSCALWSYCGRGWSRAMRGCQLLGLRSSWPGDLLSARLLSQEKRAAETHFGFETVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 AFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDM 250 260 270 280 290 300 310 320 pF1KE1 IEDAGFHKVTYESLTSGIVAIHSGFKL ::::::::::::::::::::::::::: CCDS31 IEDAGFHKVTYESLTSGIVAIHSGFKL 310 320 327 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:25:16 2016 done: Sun Nov 6 12:25:17 2016 Total Scan time: 2.510 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]