FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1755, 261 aa 1>>>pF1KE1755 261 - 261 aa - 261 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0807+/-0.000303; mu= 16.5959+/- 0.019 mean_var=68.3565+/-13.427, 0's: 0 Z-trim(117.9): 23 B-trim: 0 in 0/55 Lambda= 0.155126 statistics sampled from 30395 (30418) to 30395 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.357), width: 16 Scan time: 7.400 The best scores are: opt bits E(85289) NP_001138847 (OMIM: 610602) DNA oxidative demethyl ( 261) 1784 407.6 1.2e-113 NP_001138846 (OMIM: 610602) DNA oxidative demethyl ( 261) 1784 407.6 1.2e-113 XP_005253892 (OMIM: 610602) PREDICTED: DNA oxidati ( 261) 1784 407.6 1.2e-113 NP_001001655 (OMIM: 610602) DNA oxidative demethyl ( 261) 1784 407.6 1.2e-113 NP_001192108 (OMIM: 610602) DNA oxidative demethyl ( 157) 653 154.3 1.2e-37 NP_001192109 (OMIM: 610602) DNA oxidative demethyl ( 157) 653 154.3 1.2e-37 XP_005253893 (OMIM: 610602) PREDICTED: DNA oxidati ( 157) 653 154.3 1.2e-37 NP_631917 (OMIM: 610603) alpha-ketoglutarate-depen ( 286) 377 92.7 7.7e-19 >>NP_001138847 (OMIM: 610602) DNA oxidative demethylase (261 aa) initn: 1784 init1: 1784 opt: 1784 Z-score: 2161.5 bits: 407.6 E(85289): 1.2e-113 Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV 190 200 210 220 230 240 250 260 pF1KE1 RKKVLAPRVNLTFRKILLTKK ::::::::::::::::::::: NP_001 RKKVLAPRVNLTFRKILLTKK 250 260 >>NP_001138846 (OMIM: 610602) DNA oxidative demethylase (261 aa) initn: 1784 init1: 1784 opt: 1784 Z-score: 2161.5 bits: 407.6 E(85289): 1.2e-113 Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV 190 200 210 220 230 240 250 260 pF1KE1 RKKVLAPRVNLTFRKILLTKK ::::::::::::::::::::: NP_001 RKKVLAPRVNLTFRKILLTKK 250 260 >>XP_005253892 (OMIM: 610602) PREDICTED: DNA oxidative d (261 aa) initn: 1784 init1: 1784 opt: 1784 Z-score: 2161.5 bits: 407.6 E(85289): 1.2e-113 Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV 190 200 210 220 230 240 250 260 pF1KE1 RKKVLAPRVNLTFRKILLTKK ::::::::::::::::::::: XP_005 RKKVLAPRVNLTFRKILLTKK 250 260 >>NP_001001655 (OMIM: 610602) DNA oxidative demethylase (261 aa) initn: 1784 init1: 1784 opt: 1784 Z-score: 2161.5 bits: 407.6 E(85289): 1.2e-113 Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV 190 200 210 220 230 240 250 260 pF1KE1 RKKVLAPRVNLTFRKILLTKK ::::::::::::::::::::: NP_001 RKKVLAPRVNLTFRKILLTKK 250 260 >>NP_001192108 (OMIM: 610602) DNA oxidative demethylase (157 aa) initn: 653 init1: 653 opt: 653 Z-score: 796.7 bits: 154.3 E(85289): 1.2e-37 Smith-Waterman score: 653; 75.2% identity (82.5% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::: : . :. . . .. . : NP_001 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGIKMAVTTSGSTEMMKENWPLGAPLPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP . . . ::: ::: NP_001 SPSVPAETLSSGIRIPVGKAPPGGWRWSGCRWPTGAY 130 140 150 >>NP_001192109 (OMIM: 610602) DNA oxidative demethylase (157 aa) initn: 653 init1: 653 opt: 653 Z-score: 796.7 bits: 154.3 E(85289): 1.2e-37 Smith-Waterman score: 653; 75.2% identity (82.5% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::: : . :. . . .. . : NP_001 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGIKMAVTTSGSTEMMKENWPLGAPLPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP . . . ::: ::: NP_001 SPSVPAETLSSGIRIPVGKAPPGGWRWSGCRWPTGAY 130 140 150 >>XP_005253893 (OMIM: 610602) PREDICTED: DNA oxidative d (157 aa) initn: 653 init1: 653 opt: 653 Z-score: 796.7 bits: 154.3 E(85289): 1.2e-37 Smith-Waterman score: 653; 75.2% identity (82.5% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::: : . :. . . .. . : XP_005 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGIKMAVTTSGSTEMMKENWPLGAPLPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP . . . ::: ::: XP_005 SPSVPAETLSSGIRIPVGKAPPGGWRWSGCRWPTGAY 130 140 150 >>NP_631917 (OMIM: 610603) alpha-ketoglutarate-dependent (286 aa) initn: 339 init1: 163 opt: 377 Z-score: 459.2 bits: 92.7 E(85289): 7.7e-19 Smith-Waterman score: 377; 37.0% identity (60.9% similar) in 192 aa overlap (67-256:91-277) 40 50 60 70 80 90 pF1KE1 TRKRPRREAPGNGGHSAGPSWRHIRAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGAL : : . ::: :...: ..: . . NP_631 QVVRRAPEPRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTG 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKP-WIPVLERIRDHVSGVTGQTFNF : .. .. :: : ::. : ::.: .:. :.: : :::. ..... ::.::: NP_631 IREDIT---YQQPRLTAWYGE--LPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNS 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 VLINRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDSRGKSPSRR-VAVV .: : :.. : . : ::: :. :::.:::: : : .:.: .. . : : NP_631 LLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERV 180 190 200 210 220 230 220 230 240 250 260 pF1KE1 RLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILLTKK ..:: ::.::.:. :.. : : .: . . :::::::: . NP_631 KIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDPRGAPW 240 250 260 270 280 261 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:27:18 2016 done: Sun Nov 6 12:27:19 2016 Total Scan time: 7.400 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]