FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1755, 261 aa 1>>>pF1KE1755 261 - 261 aa - 261 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3724+/-0.00069; mu= 14.9093+/- 0.042 mean_var=70.3801+/-13.677, 0's: 0 Z-trim(110.8): 9 B-trim: 0 in 0/50 Lambda= 0.152880 statistics sampled from 11883 (11889) to 11883 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.365), width: 16 Scan time: 2.510 The best scores are: opt bits E(32554) CCDS31897.1 ALKBH2 gene_id:121642|Hs108|chr12 ( 261) 1784 401.9 2.2e-112 CCDS55883.1 ALKBH2 gene_id:121642|Hs108|chr12 ( 157) 653 152.4 1.8e-37 CCDS7906.1 ALKBH3 gene_id:221120|Hs108|chr11 ( 286) 377 91.6 6.3e-19 >>CCDS31897.1 ALKBH2 gene_id:121642|Hs108|chr12 (261 aa) initn: 1784 init1: 1784 opt: 1784 Z-score: 2131.0 bits: 401.9 E(32554): 2.2e-112 Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 GSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPV 190 200 210 220 230 240 250 260 pF1KE1 RKKVLAPRVNLTFRKILLTKK ::::::::::::::::::::: CCDS31 RKKVLAPRVNLTFRKILLTKK 250 260 >>CCDS55883.1 ALKBH2 gene_id:121642|Hs108|chr12 (157 aa) initn: 653 init1: 653 opt: 653 Z-score: 786.1 bits: 152.4 E(32554): 1.8e-37 Smith-Waterman score: 653; 75.2% identity (82.5% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE1 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRREAPGNGGHSAGPSWRHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL :::::::::::::::::::::::::::::::::: : . :. . . .. . : CCDS55 RAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGIKMAVTTSGSTEMMKENWPLGAPLPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAP . . . ::: ::: CCDS55 SPSVPAETLSSGIRIPVGKAPPGGWRWSGCRWPTGAY 130 140 150 >>CCDS7906.1 ALKBH3 gene_id:221120|Hs108|chr11 (286 aa) initn: 339 init1: 163 opt: 377 Z-score: 453.2 bits: 91.6 E(32554): 6.3e-19 Smith-Waterman score: 377; 37.0% identity (60.9% similar) in 192 aa overlap (67-256:91-277) 40 50 60 70 80 90 pF1KE1 TRKRPRREAPGNGGHSAGPSWRHIRAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGAL : : . ::: :...: ..: . . CCDS79 QVVRRAPEPRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTG 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKP-WIPVLERIRDHVSGVTGQTFNF : .. .. :: : ::. : ::.: .:. :.: : :::. ..... ::.::: CCDS79 IREDIT---YQQPRLTAWYGE--LPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNS 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 VLINRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDSRGKSPSRR-VAVV .: : :.. : . : ::: :. :::.:::: : : .:.: .. . : : CCDS79 LLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERV 180 190 200 210 220 230 220 230 240 250 260 pF1KE1 RLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILLTKK ..:: ::.::.:. :.. : : .: . . :::::::: . CCDS79 KIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDPRGAPW 240 250 260 270 280 261 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:27:17 2016 done: Sun Nov 6 12:27:17 2016 Total Scan time: 2.510 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]