FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7673, 340 aa 1>>>pF1KB7673 340 - 340 aa - 340 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.0455+/-0.000807; mu= 3.8772+/- 0.049 mean_var=283.8792+/-57.483, 0's: 0 Z-trim(117.7): 11 B-trim: 212 in 2/52 Lambda= 0.076122 statistics sampled from 18511 (18521) to 18511 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.829), E-opt: 0.2 (0.569), width: 16 Scan time: 2.740 The best scores are: opt bits E(32554) CCDS31863.1 PAWR gene_id:5074|Hs108|chr12 ( 340) 2212 255.2 5.8e-68 >>CCDS31863.1 PAWR gene_id:5074|Hs108|chr12 (340 aa) initn: 2212 init1: 2212 opt: 2212 Z-score: 1333.7 bits: 255.2 E(32554): 5.8e-68 Smith-Waterman score: 2212; 99.4% identity (99.7% similar) in 340 aa overlap (1-340:1-340) 10 20 30 40 50 60 pF1KB7 MATGGYRTSSGLGGSTTDFLEEWKAKREKMRAKQNPPGPAPPGGGSSDAAGKPPAGALGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MATGGYRTSSGLGGSTTDFLEEWKAKREKMRAKQNPPGPAPPGGGSSDAAGKPPAGALGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 PAAAAANELNNNLPGGARAAPAVPGPGGVNCAVGSAMLTRAAPGPRRSEDEPPAASASAA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: CCDS31 PAAAAANELNNNLPGGAPAAPAVPGPGGVNCAVGSAMLTRAAPGPRRSEDEPPAASASAA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 PPPQRDEEEPDGVPEKGKSSGPSARKGKGQIEKRKLREKRRSTGVVNIPAAECLDEYEDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 PPPQRDEEEPDGVPEKGKSSGPSARKGKGQIEKRKLREKRRSTGVVNIPAAECLDEYEDD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 EAGQKERKREDAITQQNTMQNEAVNLLDPGSSYLLQEPPRTVSGRYKSTTSVSEEDVSSR ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: CCDS31 EAGQKERKREDAITQQNTIQNEAVNLLDPGSSYLLQEPPRTVSGRYKSTTSVSEEDVSSR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 YSRTDRSGFPRYNRDANVSGTLVSSSTLEKKIEDLEKEVVRERQENLRLVRLMQDKEEMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 YSRTDRSGFPRYNRDANVSGTLVSSSTLEKKIEDLEKEVVRERQENLRLVRLMQDKEEMI 250 260 270 280 290 300 310 320 330 340 pF1KB7 GKLKEEIDLLNRDLDDIEDENEQLKQENKTLLKVVGQLTR :::::::::::::::::::::::::::::::::::::::: CCDS31 GKLKEEIDLLNRDLDDIEDENEQLKQENKTLLKVVGQLTR 310 320 330 340 340 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:28:25 2016 done: Sun Nov 6 12:28:25 2016 Total Scan time: 2.740 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]