FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4066, 346 aa 1>>>pF1KE4066 346 - 346 aa - 346 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.5393+/-0.000296; mu= 10.2236+/- 0.019 mean_var=199.8510+/-40.052, 0's: 0 Z-trim(124.3): 36 B-trim: 0 in 0/59 Lambda= 0.090724 statistics sampled from 45623 (45660) to 45623 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.535), width: 16 Scan time: 9.390 The best scores are: opt bits E(85289) NP_612405 (OMIM: 613336) E3 ubiquitin-protein liga ( 346) 2433 329.9 4.9e-90 NP_065865 (OMIM: 608208) E3 ubiquitin-protein liga ( 410) 1194 167.9 3.6e-41 NP_001096032 (OMIM: 613338) E3 ubiquitin-protein l ( 402) 1034 146.9 7.1e-35 NP_001002266 (OMIM: 613335) E3 ubiquitin-protein l ( 291) 264 46.0 0.00012 NP_659458 (OMIM: 613335) E3 ubiquitin-protein liga ( 291) 264 46.0 0.00012 XP_016871383 (OMIM: 613335) PREDICTED: E3 ubiquiti ( 291) 264 46.0 0.00012 XP_011537797 (OMIM: 613335) PREDICTED: E3 ubiquiti ( 291) 264 46.0 0.00012 XP_005271861 (OMIM: 613335) PREDICTED: E3 ubiquiti ( 573) 258 45.5 0.00034 XP_011537796 (OMIM: 613335) PREDICTED: E3 ubiquiti ( 573) 258 45.5 0.00034 XP_011537794 (OMIM: 613335) PREDICTED: E3 ubiquiti ( 573) 258 45.5 0.00034 NP_001269795 (OMIM: 613335) E3 ubiquitin-protein l ( 573) 258 45.5 0.00034 XP_006717767 (OMIM: 613335) PREDICTED: E3 ubiquiti ( 573) 258 45.5 0.00034 XP_011537795 (OMIM: 613335) PREDICTED: E3 ubiquiti ( 573) 258 45.5 0.00034 XP_011530357 (OMIM: 613331) PREDICTED: E3 ubiquiti ( 545) 256 45.2 0.0004 NP_060393 (OMIM: 613331) E3 ubiquitin-protein liga ( 272) 247 43.7 0.00056 XP_016863824 (OMIM: 613331) PREDICTED: E3 ubiquiti ( 285) 247 43.7 0.00057 XP_016863825 (OMIM: 613331) PREDICTED: E3 ubiquiti ( 285) 247 43.7 0.00057 XP_016863823 (OMIM: 613331) PREDICTED: E3 ubiquiti ( 289) 247 43.7 0.00058 NP_001159845 (OMIM: 613331) E3 ubiquitin-protein l ( 289) 247 43.7 0.00058 NP_848545 (OMIM: 613333) E3 ubiquitin-protein liga ( 253) 229 41.3 0.0027 XP_016864504 (OMIM: 613333) PREDICTED: E3 ubiquiti ( 154) 215 39.3 0.0069 >>NP_612405 (OMIM: 613336) E3 ubiquitin-protein ligase M (346 aa) initn: 2433 init1: 2433 opt: 2433 Z-score: 1737.5 bits: 329.9 E(85289): 4.9e-90 Smith-Waterman score: 2433; 100.0% identity (100.0% similar) in 346 aa overlap (1-346:1-346) 10 20 30 40 50 60 pF1KE4 MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 SEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 ELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 EKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQICYGMYGFMDVVCIGLIIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 EKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQICYGMYGFMDVVCIGLIIH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 EGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTGPTSGATSRPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 EGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTGPTSGATSRPP 250 260 270 280 290 300 310 320 330 340 pF1KE4 AAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV :::::::::::::::::::::::::::::::::::::::::::::: NP_612 AAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV 310 320 330 340 >>NP_065865 (OMIM: 608208) E3 ubiquitin-protein ligase M (410 aa) initn: 1447 init1: 1174 opt: 1194 Z-score: 860.2 bits: 167.9 E(85289): 3.6e-41 Smith-Waterman score: 1367; 58.3% identity (70.7% similar) in 386 aa overlap (1-346:37-410) 10 20 30 pF1KE4 MLKSRLRMFLNELKLLVLTGGGRPRAEPQP .:: : ::..:.::...: :: : : NP_065 GLLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFNDLKVFLLR---RPPQAPLP 10 20 30 40 50 60 40 50 60 70 80 pF1KE4 RGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPP----- : : : . : : . : :: ..: .:: : ::: :: NP_065 MHGDPQPPGLAA-NNTLPALGAGGWAGWRG--PRE--VVG-REPPPVPPPPPLPPSSVED 70 80 90 100 110 90 100 110 120 pF1KE4 ------LPPPGAL---------------DALSLSSSLDSGLRTPQCRICFQGPEQGELLS ::..: : ::.::::::.::: ::::::::::::::: NP_065 DWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLS 120 130 140 150 160 170 130 140 150 160 170 180 pF1KE4 PCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQ ::::::::.::::::::.:::::: :::::::.::.:.:::::::::::::::::::::: NP_065 PCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQ 180 190 200 210 220 230 190 200 210 220 230 240 pF1KE4 IAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSS .:: .::::::.:::::::::..::::.:::::::::::::::::::::::::::::: : NP_065 VAAAILGSLFLIASISWLIWSTFSPSARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPS 240 250 260 270 280 290 250 260 270 280 290 pF1KE4 VYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTG----PTS----GAT :::::::::::::::::::::::::. . .:: ...::.: . :.: ..: NP_065 VYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGG---RTNPRTSSSTQANIPSSEEETAGT 300 310 320 330 340 350 300 310 320 330 340 pF1KE4 SRP---PAAQRMRTLLP---QRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV : :: . : ..:.:::::.:..::: . :: :.::.::::::: NP_065 PAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQRSPPGSSRELVMRVTTV 360 370 380 390 400 410 >>NP_001096032 (OMIM: 613338) E3 ubiquitin-protein ligas (402 aa) initn: 1103 init1: 923 opt: 1034 Z-score: 747.1 bits: 146.9 E(85289): 7.1e-35 Smith-Waterman score: 1037; 48.0% identity (69.0% similar) in 329 aa overlap (19-346:102-402) 10 20 30 40 pF1KE4 MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGG-GCGWAPFAGCS .: : :: :. ...:: : . : .: NP_001 VAPRCRGADELPPPPLPLQPAGQEVAAAGDSGEG-PRRLPEAAAAKGGPGESEAGAGGER 80 90 100 110 120 130 50 60 70 80 90 100 pF1KE4 TRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRT : : ::. : . . .: . ::: :. NP_001 ERRGAGDQPETRSVCSSRSSSSGGGDQRAGHQHQHHQPI--------------------- 140 150 160 110 120 130 140 150 160 pF1KE4 PQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTK :.::::: ::::::.::::::::: ::: ::..::::::::.:::: ..:.:.::. : NP_001 --CKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVIAIKMK 170 180 190 200 210 220 170 180 190 200 210 220 pF1KE4 NPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQICYGMY .: :::.::.:..::::. :..::::::.::..::.::..:: : :::.:.::::::::: NP_001 QPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLLWSAFSPYAVWQRKDILFQICYGMY 230 240 250 260 270 280 230 240 250 260 270 280 pF1KE4 GFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNS ::::.::::::.:::..:::.::::.::: .: ::::::. :: .. :.:. . NP_001 GFMDLVCIGLIVHEGAAVYRVFKRWRAVNLHWDVLNYDKATDI----EESSRGESSTSRT 290 300 310 320 330 340 290 300 310 320 330 340 pF1KE4 RTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV : .. .: . . : .:::..:::....:: . : ..:. :::::::.: NP_001 LWLPLTALRNRNLVHPTQLTSPRFQCGYVLLHLFNRMRPHEDLSEDNSSGEVVMRVTSV 350 360 370 380 390 400 >>NP_001002266 (OMIM: 613335) E3 ubiquitin-protein ligas (291 aa) initn: 159 init1: 159 opt: 264 Z-score: 204.1 bits: 46.0 E(85289): 0.00012 Smith-Waterman score: 264; 28.2% identity (56.9% similar) in 202 aa overlap (75-267:51-244) 50 60 70 80 90 100 pF1KE4 GCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSG .:: ::. : : ....: .: :. NP_001 VYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGS--PPSASAPAP--VSSFSRTSITPSS 30 40 50 60 70 110 120 130 140 150 160 pF1KE4 LRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLA :::: .: ... :..::.: ::.. .:: :: .::. . :::: ::. . NP_001 QDI--CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC--KYEFIM 80 90 100 110 120 130 170 180 190 200 210 220 pF1KE4 ISTKNPL-QWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQI . .:: .:. ...: :. .: : .. .. . : .. .. .:. .: : NP_001 ETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGI 140 150 160 170 180 190 230 240 250 260 270 pF1KE4 C-YGMYGFMDVVCIG-----LIIHEGSSVY-RIFKRWQAVNQQWKVLNYDKTKDIGGDAG . .. . :: :: :... .:: ...:: .: :. : : .: NP_001 LEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEK 200 210 220 230 240 250 280 290 300 310 320 330 pF1KE4 GGTAGKSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHS NP_001 SPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 260 270 280 290 >>NP_659458 (OMIM: 613335) E3 ubiquitin-protein ligase M (291 aa) initn: 159 init1: 159 opt: 264 Z-score: 204.1 bits: 46.0 E(85289): 0.00012 Smith-Waterman score: 264; 28.2% identity (56.9% similar) in 202 aa overlap (75-267:51-244) 50 60 70 80 90 100 pF1KE4 GCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSG .:: ::. : : ....: .: :. NP_659 VYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGS--PPSASAPAP--VSSFSRTSITPSS 30 40 50 60 70 110 120 130 140 150 160 pF1KE4 LRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLA :::: .: ... :..::.: ::.. .:: :: .::. . :::: ::. . NP_659 QDI--CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC--KYEFIM 80 90 100 110 120 130 170 180 190 200 210 220 pF1KE4 ISTKNPL-QWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQI . .:: .:. ...: :. .: : .. .. . : .. .. .:. .: : NP_659 ETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGI 140 150 160 170 180 190 230 240 250 260 270 pF1KE4 C-YGMYGFMDVVCIG-----LIIHEGSSVY-RIFKRWQAVNQQWKVLNYDKTKDIGGDAG . .. . :: :: :... .:: ...:: .: :. : : .: NP_659 LEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEK 200 210 220 230 240 250 280 290 300 310 320 330 pF1KE4 GGTAGKSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHS NP_659 SPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 260 270 280 290 >>XP_016871383 (OMIM: 613335) PREDICTED: E3 ubiquitin-pr (291 aa) initn: 159 init1: 159 opt: 264 Z-score: 204.1 bits: 46.0 E(85289): 0.00012 Smith-Waterman score: 264; 28.2% identity (56.9% similar) in 202 aa overlap (75-267:51-244) 50 60 70 80 90 100 pF1KE4 GCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSG .:: ::. : : ....: .: :. XP_016 VYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGS--PPSASAPAP--VSSFSRTSITPSS 30 40 50 60 70 110 120 130 140 150 160 pF1KE4 LRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLA :::: .: ... :..::.: ::.. .:: :: .::. . :::: ::. . XP_016 QDI--CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC--KYEFIM 80 90 100 110 120 130 170 180 190 200 210 220 pF1KE4 ISTKNPL-QWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQI . .:: .:. ...: :. .: : .. .. . : .. .. .:. .: : XP_016 ETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGI 140 150 160 170 180 190 230 240 250 260 270 pF1KE4 C-YGMYGFMDVVCIG-----LIIHEGSSVY-RIFKRWQAVNQQWKVLNYDKTKDIGGDAG . .. . :: :: :... .:: ...:: .: :. : : .: XP_016 LEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEK 200 210 220 230 240 250 280 290 300 310 320 330 pF1KE4 GGTAGKSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHS XP_016 SPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 260 270 280 290 >>XP_011537797 (OMIM: 613335) PREDICTED: E3 ubiquitin-pr (291 aa) initn: 159 init1: 159 opt: 264 Z-score: 204.1 bits: 46.0 E(85289): 0.00012 Smith-Waterman score: 264; 28.2% identity (56.9% similar) in 202 aa overlap (75-267:51-244) 50 60 70 80 90 100 pF1KE4 GCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSG .:: ::. : : ....: .: :. XP_011 VYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGS--PPSASAPAP--VSSFSRTSITPSS 30 40 50 60 70 110 120 130 140 150 160 pF1KE4 LRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLA :::: .: ... :..::.: ::.. .:: :: .::. . :::: ::. . XP_011 QDI--CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC--KYEFIM 80 90 100 110 120 130 170 180 190 200 210 220 pF1KE4 ISTKNPL-QWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQI . .:: .:. ...: :. .: : .. .. . : .. .. .:. .: : XP_011 ETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGI 140 150 160 170 180 190 230 240 250 260 270 pF1KE4 C-YGMYGFMDVVCIG-----LIIHEGSSVY-RIFKRWQAVNQQWKVLNYDKTKDIGGDAG . .. . :: :: :... .:: ...:: .: :. : : .: XP_011 LEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEK 200 210 220 230 240 250 280 290 300 310 320 330 pF1KE4 GGTAGKSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHS XP_011 SPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 260 270 280 290 >>XP_005271861 (OMIM: 613335) PREDICTED: E3 ubiquitin-pr (573 aa) initn: 205 init1: 159 opt: 258 Z-score: 196.3 bits: 45.5 E(85289): 0.00034 Smith-Waterman score: 264; 27.3% identity (55.1% similar) in 245 aa overlap (39-267:295-526) 10 20 30 40 50 60 pF1KE4 FLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAG-CSTRDGDGDE-EEYYGSEPRAR : : : :: . :: : :. ... ..: XP_005 LSHGLSASSLHRFHELESCAARLHTAKSSSGLAGSMGFCSDEMGDDDVFEDSTSAKLKSR 270 280 290 300 310 320 70 80 90 100 110 120 pF1KE4 GLAGD--KEPRAGPLPPPAP---PLPPPGALDALSLSSSLDSGLRTPQCRICF-QGPEQG : . . . . : :.: ::: .. .: :... :::: .: ... XP_005 VLRAPLCSTEKDSDLDCPSPFSEKLPP---ISPVSTSGDV--------CRICHCEGDDES 330 340 350 360 370 130 140 150 160 170 pF1KE4 ELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPL-QWQAISLTV :..::.: ::.. .:: :: .::. . :::: ::. . . .:: .:. ...: XP_005 PLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC--KYEFIMETKLKPLRKWEKLQMTS 380 390 400 410 420 430 180 190 200 210 220 230 pF1KE4 IEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQIC-YGMYGFMDVVCIG-- :. .: : .. .. . : .. .. .:. .: : . .. . :: :: XP_005 SERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFT 440 450 460 470 480 490 240 250 260 270 280 290 pF1KE4 ---LIIHEGSSVY-RIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTGPT :... .:: ...:: .: :. : : .: XP_005 GGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEKSPLTEPNFENKHGYGIC 500 510 520 530 540 550 300 310 320 330 340 pF1KE4 SGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV XP_005 HSDTNSSCCTEPEDTGAEIIHV 560 570 >>XP_011537796 (OMIM: 613335) PREDICTED: E3 ubiquitin-pr (573 aa) initn: 205 init1: 159 opt: 258 Z-score: 196.3 bits: 45.5 E(85289): 0.00034 Smith-Waterman score: 264; 27.3% identity (55.1% similar) in 245 aa overlap (39-267:295-526) 10 20 30 40 50 60 pF1KE4 FLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAG-CSTRDGDGDE-EEYYGSEPRAR : : : :: . :: : :. ... ..: XP_011 LSHGLSASSLHRFHELESCAARLHTAKSSSGLAGSMGFCSDEMGDDDVFEDSTSAKLKSR 270 280 290 300 310 320 70 80 90 100 110 120 pF1KE4 GLAGD--KEPRAGPLPPPAP---PLPPPGALDALSLSSSLDSGLRTPQCRICF-QGPEQG : . . . . : :.: ::: .. .: :... :::: .: ... XP_011 VLRAPLCSTEKDSDLDCPSPFSEKLPP---ISPVSTSGDV--------CRICHCEGDDES 330 340 350 360 370 130 140 150 160 170 pF1KE4 ELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPL-QWQAISLTV :..::.: ::.. .:: :: .::. . :::: ::. . . .:: .:. ...: XP_011 PLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC--KYEFIMETKLKPLRKWEKLQMTS 380 390 400 410 420 430 180 190 200 210 220 230 pF1KE4 IEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQIC-YGMYGFMDVVCIG-- :. .: : .. .. . : .. .. .:. .: : . .. . :: :: XP_011 SERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFT 440 450 460 470 480 490 240 250 260 270 280 290 pF1KE4 ---LIIHEGSSVY-RIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTGPT :... .:: ...:: .: :. : : .: XP_011 GGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEKSPLTEPNFENKHGYGIC 500 510 520 530 540 550 300 310 320 330 340 pF1KE4 SGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV XP_011 HSDTNSSCCTEPEDTGAEIIHV 560 570 >>XP_011537794 (OMIM: 613335) PREDICTED: E3 ubiquitin-pr (573 aa) initn: 205 init1: 159 opt: 258 Z-score: 196.3 bits: 45.5 E(85289): 0.00034 Smith-Waterman score: 264; 27.3% identity (55.1% similar) in 245 aa overlap (39-267:295-526) 10 20 30 40 50 60 pF1KE4 FLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAG-CSTRDGDGDE-EEYYGSEPRAR : : : :: . :: : :. ... ..: XP_011 LSHGLSASSLHRFHELESCAARLHTAKSSSGLAGSMGFCSDEMGDDDVFEDSTSAKLKSR 270 280 290 300 310 320 70 80 90 100 110 120 pF1KE4 GLAGD--KEPRAGPLPPPAP---PLPPPGALDALSLSSSLDSGLRTPQCRICF-QGPEQG : . . . . : :.: ::: .. .: :... :::: .: ... XP_011 VLRAPLCSTEKDSDLDCPSPFSEKLPP---ISPVSTSGDV--------CRICHCEGDDES 330 340 350 360 370 130 140 150 160 170 pF1KE4 ELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPL-QWQAISLTV :..::.: ::.. .:: :: .::. . :::: ::. . . .:: .:. ...: XP_011 PLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELC--KYEFIMETKLKPLRKWEKLQMTS 380 390 400 410 420 430 180 190 200 210 220 230 pF1KE4 IEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQIC-YGMYGFMDVVCIG-- :. .: : .. .. . : .. .. .:. .: : . .. . :: :: XP_011 SERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFT 440 450 460 470 480 490 240 250 260 270 280 290 pF1KE4 ---LIIHEGSSVY-RIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTGPT :... .:: ...:: .: :. : : .: XP_011 GGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEKSPLTEPNFENKHGYGIC 500 510 520 530 540 550 300 310 320 330 340 pF1KE4 SGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV XP_011 HSDTNSSCCTEPEDTGAEIIHV 560 570 346 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:14:23 2016 done: Sun Nov 6 04:14:24 2016 Total Scan time: 9.390 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]