FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9895, 237 aa 1>>>pF1KB9895 237 - 237 aa - 237 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1825+/-0.00104; mu= 15.0504+/- 0.061 mean_var=66.9616+/-14.109, 0's: 0 Z-trim(103.7): 24 B-trim: 50 in 1/48 Lambda= 0.156733 statistics sampled from 7509 (7521) to 7509 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.592), E-opt: 0.2 (0.231), width: 16 Scan time: 2.180 The best scores are: opt bits E(32554) CCDS31797.1 TMBIM6 gene_id:7009|Hs108|chr12 ( 237) 1555 360.5 5.4e-100 CCDS44875.1 TMBIM6 gene_id:7009|Hs108|chr12 ( 295) 1555 360.6 6.5e-100 >>CCDS31797.1 TMBIM6 gene_id:7009|Hs108|chr12 (237 aa) initn: 1555 init1: 1555 opt: 1555 Z-score: 1908.7 bits: 360.5 E(32554): 5.4e-100 Smith-Waterman score: 1555; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237) 10 20 30 40 50 60 pF1KB9 MNIFDRKINFDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MNIFDRKINFDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 ALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 ALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 TAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQANLYVGLVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 TAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQANLYVGLVV 130 140 150 160 170 180 190 200 210 220 230 pF1KB9 MCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNEKDKKKEKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNEKDKKKEKK 190 200 210 220 230 >>CCDS44875.1 TMBIM6 gene_id:7009|Hs108|chr12 (295 aa) initn: 1555 init1: 1555 opt: 1555 Z-score: 1907.3 bits: 360.6 E(32554): 6.5e-100 Smith-Waterman score: 1555; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:59-295) 10 20 30 pF1KB9 MNIFDRKINFDALLKFSHITPSTQQHLKKV :::::::::::::::::::::::::::::: CCDS44 GCLPGPRGGPALFGLVTFGQSGDCCTDSGTMNIFDRKINFDALLKFSHITPSTQQHLKKV 30 40 50 60 70 80 40 50 60 70 80 90 pF1KB9 YASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 YASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAG 90 100 110 120 130 140 100 110 120 130 140 150 pF1KB9 FAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 FAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSA 150 160 170 180 190 200 160 170 180 190 200 210 pF1KB9 LSLLLLSSLGNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LSLLLLSSLGNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDL 210 220 230 240 250 260 220 230 pF1KB9 FLDFITVFRKLMMILAMNEKDKKKEKK ::::::::::::::::::::::::::: CCDS44 FLDFITVFRKLMMILAMNEKDKKKEKK 270 280 290 237 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:30:29 2016 done: Sun Nov 6 12:30:29 2016 Total Scan time: 2.180 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]