FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4115, 488 aa 1>>>pF1KE4115 488 - 488 aa - 488 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.6329+/-0.00119; mu= 3.3854+/- 0.071 mean_var=216.7670+/-45.300, 0's: 0 Z-trim(109.6): 132 B-trim: 545 in 2/51 Lambda= 0.087112 statistics sampled from 11021 (11157) to 11021 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.334), width: 16 Scan time: 1.530 The best scores are: opt bits E(33420) CCDS31390.1 TRIM6 gene_id:117854|Hs109|chr11 ( 488) 3352 434.4 1.4e-121 CCDS31389.1 TRIM6 gene_id:117854|Hs109|chr11 ( 516) 3352 434.4 1.4e-121 CCDS55738.1 TRIM6 gene_id:117854|Hs109|chr11 ( 313) 2140 281.9 6.9e-76 CCDS31388.1 TRIM34 gene_id:445372|Hs109|chr11 ( 842) 2034 269.0 1.5e-71 CCDS31391.1 TRIM34 gene_id:53840|Hs109|chr11 ( 488) 1869 248.0 1.7e-65 CCDS31393.1 TRIM5 gene_id:85363|Hs109|chr11 ( 493) 1810 240.6 3e-63 CCDS41612.1 TRIM22 gene_id:10346|Hs109|chr11 ( 498) 1583 212.1 1.2e-54 CCDS31392.1 TRIM5 gene_id:85363|Hs109|chr11 ( 326) 1280 173.9 2.5e-43 CCDS31394.1 TRIM5 gene_id:85363|Hs109|chr11 ( 347) 1280 173.9 2.6e-43 CCDS44525.1 TRIM21 gene_id:6737|Hs109|chr11 ( 475) 1048 144.8 1.9e-34 CCDS1636.1 TRIM58 gene_id:25893|Hs109|chr1 ( 486) 851 120.1 5.6e-27 CCDS4568.1 TRIM38 gene_id:10475|Hs109|chr6 ( 465) 846 119.4 8.4e-27 CCDS31356.1 TRIM68 gene_id:55128|Hs109|chr11 ( 485) 802 113.9 4e-25 CCDS34378.1 TRIM39 gene_id:56658|Hs109|chr6 ( 488) 760 108.6 1.6e-23 CCDS31048.1 TRIM11 gene_id:81559|Hs109|chr1 ( 468) 754 107.9 2.6e-23 CCDS78121.1 RPP21 gene_id:202658|Hs109|chr6 ( 503) 704 101.6 2.1e-21 CCDS34375.1 TRIM10 gene_id:10107|Hs109|chr6 ( 481) 692 100.1 5.8e-21 CCDS3808.1 TRIM60 gene_id:166655|Hs109|chr4 ( 471) 680 98.6 1.6e-20 CCDS4654.1 TRIM27 gene_id:5987|Hs109|chr6 ( 513) 680 98.6 1.7e-20 CCDS1571.1 TRIM17 gene_id:51127|Hs109|chr1 ( 477) 664 96.6 6.6e-20 CCDS4678.1 TRIM26 gene_id:7726|Hs109|chr6 ( 539) 637 93.2 7.6e-19 CCDS5678.1 TRIM4 gene_id:89122|Hs109|chr7 ( 474) 617 90.7 3.9e-18 CCDS4676.1 TRIM10 gene_id:10107|Hs109|chr6 ( 395) 588 87.0 4.3e-17 CCDS4466.1 TRIM41 gene_id:90933|Hs109|chr5 ( 630) 571 85.0 2.7e-16 CCDS44327.1 TRIM17 gene_id:51127|Hs109|chr1 ( 343) 560 83.4 4.4e-16 CCDS34374.1 TRIM31 gene_id:11074|Hs109|chr6 ( 425) 560 83.5 5.2e-16 CCDS4677.1 TRIM15 gene_id:89870|Hs109|chr6 ( 465) 547 81.9 1.7e-15 CCDS34377.1 TRIM39 gene_id:56658|Hs109|chr6 ( 518) 543 81.4 2.7e-15 CCDS4465.1 TRIM41 gene_id:90933|Hs109|chr5 ( 518) 540 81.0 3.4e-15 CCDS32220.1 TRIM69 gene_id:140691|Hs109|chr15 ( 500) 532 80.0 6.7e-15 CCDS376.1 TRIM62 gene_id:55223|Hs109|chr1 ( 475) 529 79.6 8.4e-15 CCDS2015.1 TRIM43 gene_id:129868|Hs109|chr2 ( 446) 480 73.4 5.7e-13 CCDS10498.1 MEFV gene_id:4210|Hs109|chr16 ( 781) 484 74.1 6.2e-13 CCDS55762.1 TRIM49B gene_id:283116|Hs109|chr11 ( 452) 478 73.2 6.9e-13 CCDS60930.1 TRIM49D1 gene_id:399939|Hs109|chr11 ( 452) 461 71.0 3e-12 CCDS8287.1 TRIM49 gene_id:57093|Hs109|chr11 ( 452) 460 70.9 3.3e-12 CCDS53694.1 TRIM49C gene_id:642612|Hs109|chr11 ( 452) 460 70.9 3.3e-12 CCDS3851.1 TRIML1 gene_id:339976|Hs109|chr4 ( 468) 451 69.8 7.4e-12 CCDS6056.2 TRIM35 gene_id:23087|Hs109|chr8 ( 493) 438 68.2 2.4e-11 CCDS4462.1 TRIM7 gene_id:81786|Hs109|chr5 ( 511) 430 67.2 4.9e-11 CCDS73363.1 TRIM64 gene_id:120146|Hs109|chr11 ( 449) 426 66.6 6.4e-11 >>CCDS31390.1 TRIM6 gene_id:117854|Hs109|chr11 (488 aa) initn: 3352 init1: 3352 opt: 3352 Z-score: 2296.7 bits: 434.4 E(33420): 1.4e-121 Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 488 aa overlap (1-488:1-488) 10 20 30 40 50 60 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 VAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 SLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIP 430 440 450 460 470 480 pF1KE4 MTLRRPSS :::::::: CCDS31 MTLRRPSS >>CCDS31389.1 TRIM6 gene_id:117854|Hs109|chr11 (516 aa) initn: 3352 init1: 3352 opt: 3352 Z-score: 2296.3 bits: 434.4 E(33420): 1.4e-121 Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 488 aa overlap (1-488:29-516) 10 20 30 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGH :::::::::::::::::::::::::::::::: CCDS31 MCGSERILQAGNILEIRVGQAGARRVATMTSPVLVDIREEVTCPICLELLTEPLSIDCGH 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE4 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE4 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE4 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE4 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSG 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE4 PSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 PSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAY 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE4 SRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNH 430 440 450 460 470 480 460 470 480 pF1KE4 GFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS :::::::::::::::::::::::::::::::::::: CCDS31 GFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS 490 500 510 >>CCDS55738.1 TRIM6 gene_id:117854|Hs109|chr11 (313 aa) initn: 2140 init1: 2140 opt: 2140 Z-score: 1476.1 bits: 281.9 E(33420): 6.9e-76 Smith-Waterman score: 2140; 100.0% identity (100.0% similar) in 313 aa overlap (176-488:1-313) 150 160 170 180 190 200 pF1KE4 ESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKL :::::::::::::::::::::::::::::: CCDS55 MEPERCRIQTEFNQLRNILDRVEQRELKKL 10 20 30 210 220 230 240 250 260 pF1KE4 EQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLR 40 50 60 70 80 90 270 280 290 300 310 320 pF1KE4 KPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRF 100 110 120 130 140 150 330 340 350 360 370 380 pF1KE4 VGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHF 160 170 180 190 200 210 390 400 410 420 430 440 pF1KE4 AQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 AQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVS 220 230 240 250 260 270 450 460 470 480 pF1KE4 FYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS ::::::::::::::::::::::::::::::::::::::::::: CCDS55 FYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS 280 290 300 310 >>CCDS31388.1 TRIM34 gene_id:445372|Hs109|chr11 (842 aa) initn: 2278 init1: 2034 opt: 2034 Z-score: 1398.3 bits: 269.0 E(33420): 1.5e-71 Smith-Waterman score: 2038; 79.9% identity (86.5% similar) in 399 aa overlap (1-389:29-426) 10 20 30 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGH :::::::::::::::::::::::::::::::: CCDS31 MCGSERILQAGNILEIRVGQAGARRVATMTSPVLVDIREEVTCPICLELLTEPLSIDCGH 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE4 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE4 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE4 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT 250 260 270 280 290 300 280 290 300 310 320 pF1KE4 KLRSMFRAPDLKRMLRVCRELTDVQSYW-VDVTLNPHTANLNLVLAKNRRQVRFVGAK-- :::::::::::::::::::::::::::: .. .:. . . : .. . ...: CCDS31 KLRSMFRAPDLKRMLRVCRELTDVQSYWAIQGSLTRRERRASGVRTRRSQGSSAMASKIL 310 320 330 340 350 360 330 340 350 360 370 380 pF1KE4 ------VSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSL-GPTFSF :. : ::: . : : : . :. . .. . : : . : ..:: CCDS31 LNVQEEVTCPICLELLTEPLSLDCGH-SLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 370 380 390 400 410 390 400 410 420 430 440 pF1KE4 NHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAG .:. :. CCDS31 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH 420 430 440 450 460 470 >-- initn: 1168 init1: 1168 opt: 1557 Z-score: 1074.3 bits: 209.0 E(33420): 1.7e-53 Smith-Waterman score: 1557; 60.0% identity (78.0% similar) in 422 aa overlap (73-488:427-842) 50 60 70 80 90 100 pF1KE4 GRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGE ::::::.::.:: :.: . : :: ::: CCDS31 NKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGE 400 410 420 430 440 450 110 120 130 140 150 160 pF1KE4 KLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLT :: :::.:: :::::::::::::::::: :.::: .: :::.: ::.::.::.::::: CCDS31 KLLLFCKEDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLE 460 470 480 490 500 510 170 180 190 200 210 220 pF1KE4 AFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAEND : :::.::::: :.. :: ::::::.:::.::. :::::..::.:::: : . :::.. CCDS31 ADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDE 520 530 540 550 560 570 230 240 250 260 270 280 pF1KE4 LVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPD ::.: : .::::::.: : : ::::::::.: . . ::.: :.::. . ::...:.::: CCDS31 LVQQKQLVRELISDVECRSQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAPD 580 590 600 610 620 630 290 300 310 320 330 340 pF1KE4 LKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDC :.:::.. :::: :. :::::::: . ::::::....::: ... . .: :. CCDS31 LSRMLQMFRELTAVRCYWVDVTLNSVNLNLNLVLSEDQRQV--ISVPIWPFQC----YNY 640 650 660 670 680 690 350 360 370 380 390 400 pF1KE4 SVLGSQHFSSGKHYWEVDVAKKTAWILGV-C-SNSLGPTFSFNHFAQNHSAYSRYQPQSG .:::::.::::::::::::.::::::::: : . : . . :. .. :..:.: : CCDS31 GVLGSQYFSSGKHYWEVDVSKKTAWILGVYCRTYSRHMKYVVRRCANRQNLYTKYRPLFG 700 710 720 730 740 750 410 420 430 440 450 pF1KE4 YWVIGLQHNHEYRAYEDS---SPSLL-LSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPI :::::::.. .: ..:.: .: .: :::.::: ::::::::::: :::.:::.:: : CCDS31 YWVIGLQNKCKYGVFEESLSSDPEVLTLSMAVPPCRVGVFLDYEAGIVSFFNVTSHGSLI 760 770 780 790 800 810 460 470 480 pF1KE4 YTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS : ::: : . ::::: :: :::: ::: CCDS31 YKFSKCCFSQPVYPYFNPWNCPAPMTLCPPSS 820 830 840 >>CCDS31391.1 TRIM34 gene_id:53840|Hs109|chr11 (488 aa) initn: 1480 init1: 1480 opt: 1869 Z-score: 1289.4 bits: 248.0 E(33420): 1.7e-65 Smith-Waterman score: 1869; 59.7% identity (78.7% similar) in 494 aa overlap (1-488:1-488) 10 20 30 40 50 60 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ :.: .:....:::::::::::::::::.:::::.:.:::: ...:.: .. :. ::::: CCDS31 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE ::. .:. :.::::::.::.:: :.: . : :: ::::: :::.:: :::::::: CCDS31 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER :::::::::: :.::: .: :::.: ::.::.::.::::: : :::.::::: :.. :: CCDS31 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR ::::::.:::.::. :::::..::.:::: : . :::..::.: : .::::::.: : CCDS31 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW : ::::::::.: . . ::.: :.::. . ::...:.::::.:::.. :::: :. :: CCDS31 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAPDLSRMLQMFRELTAVRCYW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD :::::: . ::::::....::: ... . .: :. .:::::.::::::::::: CCDS31 VDVTLNSVNLNLNLVLSEDQRQV--ISVPIWPFQC----YNYGVLGSQYFSSGKHYWEVD 310 320 330 340 350 370 380 390 400 410 pF1KE4 VAKKTAWILGV-C-SNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDS :.::::::::: : . : . . :. .. :..:.: ::::::::.. .: ..:.: CCDS31 VSKKTAWILGVYCRTYSRHMKYVVRRCANRQNLYTKYRPLFGYWVIGLQNKCKYGVFEES 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 SPS----LLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNP : : :::.::: ::::::::::: :::.:::.:: :: ::: : . ::::: CCDS31 LSSDPEVLTLSMAVPPCRVGVFLDYEAGIVSFFNVTSHGSLIYKFSKCCFSQPVYPYFNP 420 430 440 450 460 470 480 pF1KE4 CNCVIPMTLRRPSS :: :::: ::: CCDS31 WNCPAPMTLCPPSS 480 >>CCDS31393.1 TRIM5 gene_id:85363|Hs109|chr11 (493 aa) initn: 1715 init1: 885 opt: 1810 Z-score: 1249.3 bits: 240.6 E(33420): 3e-63 Smith-Waterman score: 1810; 56.4% identity (79.3% similar) in 502 aa overlap (1-488:1-493) 10 20 30 40 50 60 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ :.: .::...:::::::::::::.:::.::::::::::.: : ..:.. ..:: :::::. CCDS31 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML-DKGESSCPVCR 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE :::: :.:::::.::::..:::: :.: : :. :: ::::: ::::::::::::::: CCDS31 ISYQPENIRPNRHVANIVEKLREVKLSPEGQ-KVDHCARHGEKLLLFCQEDGKVICWLCE 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER ::::::::::::.::::.::: :.: .:. :....::::.: : :::.:.:::.:.. .. CCDS31 RSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR . ..:.:::.::: :. ::..::.::. :. . ..:...:.:::::::::::::.: CCDS31 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW :::.::::: :. : .:.: ::.:::..: . : .::::::: ::.: ::::::. :: CCDS31 LQGSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYW 240 250 260 270 280 290 310 320 330 340 350 pF1KE4 VDVTLNPHTANLNLVLAKNRRQVR------FVGAKVSGPSCLEKHYDCS-VLGSQHFSSG ::::. :.. . :.....::: . ::. . . . . :. .:::: ..:: CCDS31 VDVTVAPNNISCA-VISEDKRQVSSPKPQIIYGARGTRYQTFVNFNYCTGILGSQSITSG 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 KHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYR ::::::::.::::::::::.. . : .. .. .:.. :::. :::::::... . CCDS31 KHYWEVDVSKKTAWILGVCAG-FQPD-AMCNIEKNEN----YQPKYGYWVIGLEEGVKCS 360 370 380 390 400 410 420 430 440 450 460 pF1KE4 AYEDSS---PSLL----LSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPT :..::: ::. ::. . : :::::::::: ::::.:.::::: :: ::. : CCDS31 AFQDSSFHTPSVPFIVPLSVIICPDRVGVFLDYEACTVSFFNITNHGFLIYKFSHCSFSQ 420 430 440 450 460 470 470 480 pF1KE4 TLCPYFNPCNCVIPMTLRRPSS . ::.:: .: .:::: ::: CCDS31 PVFPYLNPRKCGVPMTLCSPSS 480 490 >>CCDS41612.1 TRIM22 gene_id:10346|Hs109|chr11 (498 aa) initn: 1837 init1: 1432 opt: 1583 Z-score: 1095.0 bits: 212.1 E(33420): 1.2e-54 Smith-Waterman score: 1845; 57.5% identity (77.4% similar) in 501 aa overlap (1-488:1-498) 10 20 30 40 50 60 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ : : :::..::::::::::::::::.:::::::::::: . .:::: ..:: :::::: CCDS41 MDFSVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE : .:::::::::::::::.:..:: ..: . : .: ::.:::.::.::::::::.:: CCDS41 TRFQPGNLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER ::::.::.:: ..::..: :::.: .:..: .:.:::::: ::...:.::: .. :: CCDS41 LSQEHQGHQTFRINEVVKECQEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNYIQIER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR .: ::..: ::: :::::.:::. : . : . : ..::.: :. :::::.:: CCDS41 QKILKGFNEMRVILDNEEQRELQKLEEGEVNVLDNLAAATDQLVQQRQDASTLISDLQRR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW .::..:.:::: :: .::: :::.::... ::.:.::.:::. ::.: .:::::: :: CCDS41 LRGSSVEMLQDVIDVMKRSESWTLKKPKSVSKKLKSVFRVPDLSGMLQVLKELTDVQYYW 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGA---KVSGPSCLEKHYDCSVLGSQHFSSGKHYW ::: ::: .:. :.... ..:::. : . : :.: : . . .:.: :.:::::.:: CCDS41 VDVMLNPGSATSNVAISVDQRQVKTVRTCTFKNSNP-CDFSAF--GVFGCQYFSSGKYYW 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 EVDVAKKTAWILGVCS--NSLGPT----FSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHE ::::. : :::::: : .::. :.:. .. ..::::.:: ::::::::.. : CCDS41 EVDVSGKIAWILGVHSKISSLNKRKSSGFAFDPSVNYSKVYSRYRPQYGYWVIGLQNTCE 360 370 380 390 400 410 420 430 440 450 460 pF1KE4 YRAYEDSSPS----LLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTT : :.:::: : : : :.::: :.::::::::: :::.:::::: :: :: : CCDS41 YNAFEDSSSSDPKVLTLFMAVPPCRIGVFLDYEAGIVSFFNVTNHGALIYKFSGCRFSRP 420 430 440 450 460 470 470 480 pF1KE4 LCPYFNPCNCVIPMTLRRPSS ::::: ::..:::. ::: CCDS41 AYPYFNPWNCLVPMTVCPPSS 480 490 >>CCDS31392.1 TRIM5 gene_id:85363|Hs109|chr11 (326 aa) initn: 1092 init1: 846 opt: 1280 Z-score: 891.7 bits: 173.9 E(33420): 2.5e-43 Smith-Waterman score: 1280; 63.0% identity (85.7% similar) in 300 aa overlap (1-300:1-298) 10 20 30 40 50 60 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ :.: .::...:::::::::::::.:::.::::::::::.: : ..:.. ..:: :::::. CCDS31 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML-DKGESSCPVCR 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE :::: :.:::::.::::..:::: :.: : :. :: ::::: ::::::::::::::: CCDS31 ISYQPENIRPNRHVANIVEKLREVKLSPEGQ-KVDHCARHGEKLLLFCQEDGKVICWLCE 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER ::::::::::::.::::.::: :.: .:. :....::::.: : :::.:.:::.:.. .. CCDS31 RSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR . ..:.:::.::: :. ::..::.::. :. . ..:...:.:::::::::::::.: CCDS31 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW :::.::::: :. : .:.: ::.:::..: . : .::::::: ::.: ::::::. :: CCDS31 LQGSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYW 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD CCDS31 GWSAMARSRFTATSTSQIQAILLPQPPK 300 310 320 >>CCDS31394.1 TRIM5 gene_id:85363|Hs109|chr11 (347 aa) initn: 1287 init1: 846 opt: 1280 Z-score: 891.3 bits: 173.9 E(33420): 2.6e-43 Smith-Waterman score: 1280; 63.0% identity (85.7% similar) in 300 aa overlap (1-300:1-298) 10 20 30 40 50 60 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ :.: .::...:::::::::::::.:::.::::::::::.: : ..:.. ..:: :::::. CCDS31 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML-DKGESSCPVCR 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE :::: :.:::::.::::..:::: :.: : :. :: ::::: ::::::::::::::: CCDS31 ISYQPENIRPNRHVANIVEKLREVKLSPEGQ-KVDHCARHGEKLLLFCQEDGKVICWLCE 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER ::::::::::::.::::.::: :.: .:. :....::::.: : :::.:.:::.:.. .. CCDS31 RSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR . ..:.:::.::: :. ::..::.::. :. . ..:...:.:::::::::::::.: CCDS31 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW :::.::::: :. : .:.: ::.:::..: . : .::::::: ::.: ::::::. :: CCDS31 LQGSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYW 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD CCDS31 GKEKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL 300 310 320 330 340 >>CCDS44525.1 TRIM21 gene_id:6737|Hs109|chr11 (475 aa) initn: 1371 init1: 749 opt: 1048 Z-score: 731.9 bits: 144.8 E(33420): 1.9e-34 Smith-Waterman score: 1368; 46.6% identity (71.2% similar) in 466 aa overlap (11-474:12-448) 10 20 30 40 50 pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVC :::::::::. ..::.::.::::::: :: : .:. : :::: CCDS44 MASAARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECI------SQVGKGGGSVCPVC 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 QTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLC . . ::::::.:::.: :.:. . .. :: :::.:.:::..:::..::.: CCDS44 RQRFLLKNLRPNRQLANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVC 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 ERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPE .:..:: : .::.:::::::.: .: .:. ... :::: . : :...::. .: . CCDS44 AQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQ 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 RCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLER . ::..:: : .:.: . :::.:..::..:.. :::. : : :..:.:.:.::::.:.: CCDS44 KSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELDR 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 RCQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSY ::..:..::::.: : :::: :.:. . .:::. ..: ::.:::.: CCDS44 RCHSSALELLQEVIIVLERSESWNLKDLDITSPELRSVCHVPGLKKMLRTCA-------- 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 WVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCS--VLGSQHFSSGKHYW : .::.: ::: :.:...:::::. .. : :. :...: :::.::: :::::: CCDS44 -VHITLDPDTANPWLILSEDRRQVRLGDTQQSIPGN-EERFDSYPMVLGAQHFHSGKHYW 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE4 EVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYED ::::. : :: :::: .:. .:: . .::.:.: : ....:.: CCDS44 EVDVTGKEAWDLGVCRDSVRRK---GHFLLSS--------KSGFWTIWLWNKQKYEA--G 350 360 370 380 390 420 430 440 450 460 470 pF1KE4 SSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNC . :. : . ::: .::.::::::: :::::.:.:: ::.::. : : :.:.: CCDS44 TYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLIYSFSECAFTGPLRPFFSPGFN 400 410 420 430 440 450 480 pF1KE4 VIPMTLRRPSS CCDS44 DGGKNTAPLTLCPLNIGSQGSTDY 460 470 488 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Jul 3 20:39:14 2020 done: Fri Jul 3 20:39:14 2020 Total Scan time: 1.530 Total Display time: 0.110 Function used was FASTA [36.3.4 Apr, 2011]