FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3263, 634 aa 1>>>pF1KE3263 634 - 634 aa - 634 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0580+/-0.00118; mu= 12.6307+/- 0.071 mean_var=151.8462+/-29.581, 0's: 0 Z-trim(106.9): 28 B-trim: 0 in 0/52 Lambda= 0.104081 statistics sampled from 9247 (9256) to 9247 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.284), width: 16 Scan time: 3.730 The best scores are: opt bits E(32554) CCDS31132.1 GTPBP4 gene_id:23560|Hs108|chr10 ( 634) 4166 638.1 1.1e-182 >>CCDS31132.1 GTPBP4 gene_id:23560|Hs108|chr10 (634 aa) initn: 4166 init1: 4166 opt: 4166 Z-score: 3393.4 bits: 638.1 E(32554): 1.1e-182 Smith-Waterman score: 4166; 100.0% identity (100.0% similar) in 634 aa overlap (1-634:1-634) 10 20 30 40 50 60 pF1KE3 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RLSQILTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RLSQILTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DSLYRCKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 DSLYRCKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ITALAHLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFINKPLIVVANKCDVKRIAELS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 ITALAHLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFINKPLIVVANKCDVKRIAELS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EDDQKIFTDLQSEGFPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EDDQKIFTDLQSEGFPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDLELEMGDDYILDLQKYWDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 HLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDLELEMGDDYILDLQKYWDLM 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 NLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 NLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 RQLAKQIREKKKLKILESKEKNTQGPRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RQLAKQIREKKKLKILESKEKNTQGPRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 VQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNAQKKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNAQKKM 550 560 570 580 590 600 610 620 630 pF1KE3 NRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR :::::::::::::::::::::::::::::::::: CCDS31 NRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 610 620 630 634 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:29:16 2016 done: Sat Nov 5 22:29:17 2016 Total Scan time: 3.730 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]