FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9617, 344 aa 1>>>pF1KE9617 344 - 344 aa - 344 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7291+/-0.000802; mu= 13.5412+/- 0.048 mean_var=63.4466+/-12.645, 0's: 0 Z-trim(106.6): 11 B-trim: 0 in 0/52 Lambda= 0.161016 statistics sampled from 9056 (9062) to 9056 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.667), E-opt: 0.2 (0.278), width: 16 Scan time: 2.490 The best scores are: opt bits E(32554) CCDS30938.1 CENPL gene_id:91687|Hs108|chr1 ( 344) 2315 546.4 1.3e-155 CCDS44277.1 CENPL gene_id:91687|Hs108|chr1 ( 390) 1404 334.8 7.3e-92 >>CCDS30938.1 CENPL gene_id:91687|Hs108|chr1 (344 aa) initn: 2315 init1: 2315 opt: 2315 Z-score: 2907.3 bits: 546.4 E(32554): 1.3e-155 Smith-Waterman score: 2315; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344) 10 20 30 40 50 60 pF1KE9 MDSYSAPESTPSASSRPEDYFIGATPLQKRLESVRKQSSFILTPPRRKIPQCSQLQEDVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MDSYSAPESTPSASSRPEDYFIGATPLQKRLESVRKQSSFILTPPRRKIPQCSQLQEDVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 PQKVAFLLHKQWTLYSLTPLYKFSYSNLKEYSRLLNAFIVAEKQKGLAVEVGEDFNIKVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 PQKVAFLLHKQWTLYSLTPLYKFSYSNLKEYSRLLNAFIVAEKQKGLAVEVGEDFNIKVI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 FSTLLGMKGTQRDPEAFLVQIVSKSQLPSENREGKVLWTGWFCCVFGDSLLETVSEDFTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 FSTLLGMKGTQRDPEAFLVQIVSKSQLPSENREGKVLWTGWFCCVFGDSLLETVSEDFTC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 LPLFLANGAESNTAIIGTWFQKTFDCYFSPLAINAFNLSWMAAMWTACKMDHYVATTEFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 LPLFLANGAESNTAIIGTWFQKTFDCYFSPLAINAFNLSWMAAMWTACKMDHYVATTEFL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 WSVPCSPQSLDISFAIHPEDAKALWDSVHKTPGEVTQEEVDLFMDCLYSHFHRHFKIHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 WSVPCSPQSLDISFAIHPEDAKALWDSVHKTPGEVTQEEVDLFMDCLYSHFHRHFKIHLS 250 260 270 280 290 300 310 320 330 340 pF1KE9 ATRLVRVSTSVASAHTDGKIKILCHKYLIGVLAYLTELAIFQIE :::::::::::::::::::::::::::::::::::::::::::: CCDS30 ATRLVRVSTSVASAHTDGKIKILCHKYLIGVLAYLTELAIFQIE 310 320 330 340 >>CCDS44277.1 CENPL gene_id:91687|Hs108|chr1 (390 aa) initn: 1404 init1: 1404 opt: 1404 Z-score: 1762.7 bits: 334.8 E(32554): 7.3e-92 Smith-Waterman score: 2124; 87.8% identity (87.8% similar) in 376 aa overlap (15-344:15-390) 10 20 30 40 50 60 pF1KE9 MDSYSAPESTPSASSRPEDYFIGATPLQKRLESVRKQSSFILTPPRRKIPQCSQLQEDVD :::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MDSYSAPESTPSASSRPEDYFIGATPLQKRLESVRKQSSFILTPPRRKIPQCSQLQEDVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 PQKVAFLLHKQWTLYSLTPLYKFSYSNLKEYSRLLNAFIVAEKQKGLAVEVGEDFNIKVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PQKVAFLLHKQWTLYSLTPLYKFSYSNLKEYSRLLNAFIVAEKQKGLAVEVGEDFNIKVI 70 80 90 100 110 120 130 140 pF1KE9 FSTLLGMKGTQRDPEAFLVQ---------------------------------------- :::::::::::::::::::: CCDS44 FSTLLGMKGTQRDPEAFLVQGLILSPRLEYSGTILVDCNLCLLGSSDPSTLAFQVAGTAG 130 140 150 160 170 180 150 160 170 180 190 pF1KE9 ------IVSKSQLPSENREGKVLWTGWFCCVFGDSLLETVSEDFTCLPLFLANGAESNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ACHHTRIVSKSQLPSENREGKVLWTGWFCCVFGDSLLETVSEDFTCLPLFLANGAESNTA 190 200 210 220 230 240 200 210 220 230 240 250 pF1KE9 IIGTWFQKTFDCYFSPLAINAFNLSWMAAMWTACKMDHYVATTEFLWSVPCSPQSLDISF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 IIGTWFQKTFDCYFSPLAINAFNLSWMAAMWTACKMDHYVATTEFLWSVPCSPQSLDISF 250 260 270 280 290 300 260 270 280 290 300 310 pF1KE9 AIHPEDAKALWDSVHKTPGEVTQEEVDLFMDCLYSHFHRHFKIHLSATRLVRVSTSVASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 AIHPEDAKALWDSVHKTPGEVTQEEVDLFMDCLYSHFHRHFKIHLSATRLVRVSTSVASA 310 320 330 340 350 360 320 330 340 pF1KE9 HTDGKIKILCHKYLIGVLAYLTELAIFQIE :::::::::::::::::::::::::::::: CCDS44 HTDGKIKILCHKYLIGVLAYLTELAIFQIE 370 380 390 344 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:24:01 2016 done: Sun Nov 6 06:24:01 2016 Total Scan time: 2.490 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]