(Circular) (Six-base) MAPSORT of: pFN21AE4178.seq Check: 1586 from: 1 to: 6631 pFN21AE4178 6631 bp With 182 enzymes: SgfI * March 28, 2012 13:43 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 2967 2967 Size: 6631 AatII G_ACGT'C Cuts at: 278 331 414 600 1536 3398 4441 278 Size: 53 83 186 936 1862 1043 2468 Fragments arranged by size: 2468 1862 1043 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 2769 3974 1937 Size: 832 1205 4594 Fragments arranged by size: 4594 1205 832 Acc65I G'GTAC_C Cuts at: 3952 3952 Size: 6631 AclI AA'CG_TT Cuts at: 1563 4758 5131 1563 Size: 3195 373 3063 Fragments arranged by size: 3195 3063 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 2739 2969 4694 6078 6346 1632 Size: 1107 230 1725 1384 268 1917 Fragments arranged by size: 1917 1725 1384 1107 268 230 AflII C'TTAA_G Cuts at: 820 1017 820 Size: 197 6434 AflIII A'CryG_T Cuts at: 1203 2999 3246 3528 5530 6507 1203 Size: 1796 247 282 2002 977 1327 Fragments arranged by size: 2002 1796 1327 977 282 247 AgeI A'CCGG_T Cuts at: 5462 5462 Size: 6631 AhdI GACnn_n'nnGTC Cuts at: 5360 5360 Size: 6631 AleI CACnn'nnGTG Cuts at: 1166 1166 Size: 6631 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 2316 2645 1184 Size: 1132 329 5170 Fragments arranged by size: 5170 1132 329 AlwNI CAG_nnn'CTG Cuts at: 2182 2497 2719 4374 5946 2182 Size: 315 222 1655 1572 2867 Fragments arranged by size: 2867 1655 1572 315 222 ApaI G_GGCC'C Cuts at: 2070 2076 3145 2070 Size: 6 1069 5556 Fragments arranged by size: 5556 1069 6 ApaLI G'TGCA_C Cuts at: 4688 5844 4688 Size: 1156 5475 ApoI r'AATT_y Cuts at: 1493 3940 4166 4318 6427 1493 Size: 2447 226 152 2109 1697 Fragments arranged by size: 2447 2109 1697 226 152 AseI AT'TA_AT Cuts at: 160 1032 5185 160 Size: 872 4153 1606 Fragments arranged by size: 4153 1606 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 6631 AvaI C'yCGr_G Cuts at: 1870 1943 2062 2069 2075 2114 3144 3799 3956 Size: 73 119 7 6 39 1030 655 157 Cuts at: 3956 1870 Size: 4545 Fragments arranged by size: 4545 1030 655 157 119 73 39 7 6 AvrII C'CTAG_G Cuts at: 2983 2983 Size: 6631 BamHI G'GATC_C Cuts at: 3961 4328 3961 Size: 367 6264 BanI G'GyrC_C Cuts at: 618 943 1160 1787 2080 2910 2987 3593 3623 Size: 325 217 627 293 830 77 606 30 Cuts at: 3623 3685 3952 5407 618 Size: 62 267 1455 1842 Fragments arranged by size: 1842 1455 830 627 606 325 293 267 217 77 62 30 BanII G_rGCy'C Cuts at: 1391 2048 2070 2076 3145 3519 3950 1391 Size: 657 22 6 1069 374 431 4072 Fragments arranged by size: 4072 1069 657 431 374 22 6 BbeI G_GCGC'C Cuts at: 2084 3689 2084 Size: 1605 5026 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 928 Size: 971 5660 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 1987 2021 2526 2560 4822 4856 1903 Size: 34 50 34 505 34 2262 34 3678 Fragments arranged by size: 3678 2262 505 50 34 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 2603 4523 5733 2603 Size: 1920 1210 3501 Fragments arranged by size: 3501 1920 1210 BclI T'GATC_A Cuts at: 1548 1548 Size: 6631 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 2031 2117 2193 Size: 107 122 71 631 605 359 86 76 Cuts at: 2193 2243 2268 2459 5242 136 Size: 50 25 191 2783 1525 Fragments arranged by size: 2783 1525 631 605 359 191 122 107 86 76 71 50 25 BglII A'GATC_T Cuts at: 6626 6626 Size: 6631 BlpI GC'TnA_GC Cuts at: 2183 2861 3554 3568 4048 2183 Size: 678 693 14 480 4766 Fragments arranged by size: 4766 693 678 480 14 Bme1580I G_kGCm'C Cuts at: 1790 2070 2076 3145 3275 3598 4692 5848 1790 Size: 280 6 1069 130 323 1094 1156 2573 Fragments arranged by size: 2573 1156 1094 1069 323 280 130 6 BmgBI CAC'GTC Cuts at: 1318 2674 2803 3002 1318 Size: 1356 129 199 4947 Fragments arranged by size: 4947 1356 199 129 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 4362 5320 442 Size: 416 53 83 399 24 2945 958 1753 Fragments arranged by size: 2945 1753 958 416 399 83 53 24 BmtI G_CTAG'C Cuts at: 1056 1056 Size: 6631 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 3608 3687 3754 3890 5291 1239 Size: 2369 79 67 136 1401 2579 Fragments arranged by size: 2579 2369 1401 136 79 67 Bpu10I CC'TnA_GC Cuts at: 2783 2967 2783 Size: 184 6447 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 2618 4756 5621 5919 2618 Size: 2138 865 298 3330 Fragments arranged by size: 3330 2138 865 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 2734 5294 882 Size: 617 1235 2560 2219 Fragments arranged by size: 2560 2219 1235 617 BsaAI yAC'GTr Cuts at: 493 1204 2296 2401 2653 2887 3115 3249 3604 Size: 711 1092 105 252 234 228 134 355 Cuts at: 3604 4422 493 Size: 818 2702 Fragments arranged by size: 2702 1092 818 711 355 252 234 228 134 105 BsaBI GATnn'nnATC Cuts at: 6625 6625 Size: 6631 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 2081 2532 2808 2979 Size: 53 83 186 936 548 451 276 171 Cuts at: 2979 3395 3545 3686 4438 4820 5455 275 Size: 416 150 141 752 382 635 1451 Fragments arranged by size: 1451 936 752 635 548 451 416 382 276 186 171 150 141 83 53 BsaWI w'CCGG_w Cuts at: 3383 5064 5462 5736 5883 6294 3383 Size: 1681 398 274 147 411 3720 Fragments arranged by size: 3720 1681 411 398 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 3329 3359 3467 3497 3752 Size: 30 165 30 1926 30 108 30 255 Cuts at: 3752 3782 1178 Size: 30 4027 Fragments arranged by size: 4027 1926 255 165 108 30 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 2702 2774 2777 2924 3475 1186 Size: 1516 72 3 147 551 4342 Fragments arranged by size: 4342 1516 551 147 72 3 BseYI C'CCAG_C Cuts at: 2503 2787 2878 5834 6330 2503 Size: 284 91 2956 496 2804 Fragments arranged by size: 2956 2804 496 284 91 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 2195 2276 2393 2465 2510 1163 Size: 573 459 81 117 72 45 5284 Fragments arranged by size: 5284 573 459 117 81 72 45 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 2031 3106 3327 4081 4842 5870 Size: 275 186 30 1075 221 754 761 1028 Cuts at: 5870 1540 Size: 2301 Fragments arranged by size: 2301 1075 1028 761 754 275 221 186 30 BsiHKAI G_wGCw'C Cuts at: 2055 3416 3710 4692 4777 5848 2055 Size: 1361 294 982 85 1071 2838 Fragments arranged by size: 2838 1361 1071 982 294 85 BsmI GAATG_Cn' Cuts at: 4142 4235 4142 Size: 93 6538 BsmBI CGTCTCn'nnnn_ Cuts at: 2532 2532 Size: 6631 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2048 2055 2070 2076 3145 3275 3416 Size: 399 258 7 15 6 1069 130 141 Cuts at: 3416 3519 3598 3710 3950 4692 4777 5848 1391 Size: 103 79 112 240 742 85 1071 2174 Fragments arranged by size: 2174 1071 1069 742 399 258 240 141 130 112 103 85 79 15 7 6 BspEI T'CCGG_A Cuts at: 6294 6294 Size: 6631 BspHI T'CATG_A Cuts at: 2835 4520 6250 2835 Size: 1685 1730 3216 Fragments arranged by size: 3216 1730 1685 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2637 2967 3986 844 Size: 1793 330 1019 3489 Fragments arranged by size: 3489 1793 1019 330 BsrBI CCG'CTC Cuts at: 1394 1823 4518 1394 Size: 429 2695 3507 Fragments arranged by size: 3507 2695 429 BsrDI GCAATG_nn' Cuts at: 65 1248 2491 5126 5300 65 Size: 1183 1243 2635 174 1396 Fragments arranged by size: 2635 1396 1243 1183 174 BsrFI r'CCGG_y Cuts at: 1700 1810 2030 2107 3171 3326 5275 5462 1700 Size: 110 220 77 1064 155 1949 187 2869 Fragments arranged by size: 2869 1949 1064 220 187 155 110 77 BsrGI T'GTAC_A Cuts at: 96 96 Size: 6631 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 6631 BssSI C'ACGA_G Cuts at: 4691 5703 4691 Size: 1012 5619 BstAPI GCAn_nnn'nTGC Cuts at: 794 2497 3630 794 Size: 1703 1133 3795 Fragments arranged by size: 3795 1703 1133 BstBI TT'CG_AA Cuts at: 5435 5435 Size: 6631 BstEII G'GTnAC_C Cuts at: 1184 1184 Size: 6631 BstXI CCAn_nnnn'nTGG Cuts at: 2587 2587 Size: 6631 BstYI r'GATC_y Cuts at: 1972 2310 3961 4328 4713 4730 6182 6268 6280 Size: 338 1651 367 385 17 1452 86 12 Cuts at: 6280 6626 1972 Size: 346 1977 Fragments arranged by size: 1977 1651 1452 385 367 346 338 86 17 12 Bsu36I CC'TnA_GG Cuts at: 2424 2424 Size: 6631 BtgI C'CryG_G Cuts at: 513 1065 2160 2828 3070 3219 3267 3540 3726 Size: 552 1095 668 242 149 48 273 186 Cuts at: 3726 3747 513 Size: 21 3397 Fragments arranged by size: 3397 1095 668 552 273 242 186 149 48 21 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 487 Size: 683 56 5892 Fragments arranged by size: 5892 683 56 BtsI GCAGTG_nn' Cuts at: 3856 4147 4941 4961 3856 Size: 291 794 20 5526 Fragments arranged by size: 5526 794 291 20 ClaI AT'CG_AT Cuts at: 1554 1554 Size: 6631 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 529 Size: 35 6596 DraI TTT'AAA Cuts at: 3935 3935 Size: 6631 DraIII CAC_nnn'GTG Cuts at: 2203 2326 2668 2803 3118 2203 Size: 123 342 135 315 5716 Fragments arranged by size: 5716 342 315 135 123 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 5638 809 Size: 507 4322 1802 Fragments arranged by size: 4322 1802 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 2028 2244 2676 Size: 54 1425 50 275 18 198 216 432 Cuts at: 2676 3297 3324 3438 3495 3579 3723 3819 4078 Size: 621 27 114 57 84 144 96 259 Cuts at: 4078 4967 6596 8 Size: 889 1629 43 Fragments arranged by size: 1629 1425 889 621 432 275 259 216 198 144 114 96 84 57 54 50 43 27 18 EagI C'GGCC_G Cuts at: 1537 1812 2028 3324 4078 1537 Size: 275 216 1296 754 4090 Fragments arranged by size: 4090 1296 754 275 216 EarI CTCTTCn'nnn_ Cuts at: 1353 4561 1353 Size: 3208 3423 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 5218 5592 5738 387 Size: 1064 138 3629 374 146 1280 Fragments arranged by size: 3629 1280 1064 374 146 138 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2739 2969 3608 3687 3754 3890 4694 Size: 393 1107 230 639 79 67 136 804 Cuts at: 4694 5291 6078 6346 1239 Size: 597 787 268 1524 Fragments arranged by size: 1524 1107 804 787 639 597 393 268 230 136 79 67 EcoNI CCTnn'n_nnAGG Cuts at: 2633 2711 2939 2633 Size: 78 228 6325 Fragments arranged by size: 6325 228 78 EcoO109I rG'GnC_Cy Cuts at: 2066 2929 2944 3201 3342 2066 Size: 863 15 257 141 5355 Fragments arranged by size: 5355 863 257 141 15 EcoRI G'AATT_C Cuts at: 3940 4318 3940 Size: 378 6253 FspI TGC'GCA Cuts at: 2319 5137 2319 Size: 2818 3813 FspAI rTGC'GCAy Cuts at: 2319 2319 Size: 6631 HaeII r_GCGC'y Cuts at: 1678 2026 2084 3013 3427 3689 5778 1678 Size: 348 58 929 414 262 2089 2531 Fragments arranged by size: 2531 2089 929 414 348 262 58 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 2600 2632 3188 3220 3329 Size: 32 135 32 1028 32 556 32 109 Cuts at: 3329 3361 3470 3502 3640 3672 3752 3784 5272 Size: 32 109 32 138 32 80 32 1488 Cuts at: 5272 5304 5346 5378 1373 Size: 32 42 32 2626 Fragments arranged by size: 2626 1488 1028 556 138 135 109 109 80 42 32 32 32 32 32 32 32 32 32 32 HincII GTy'rAC Cuts at: 669 1657 1938 3975 4221 669 Size: 988 281 2037 246 3079 Fragments arranged by size: 3079 2037 988 281 246 HindIII A'AGCT_T Cuts at: 748 748 Size: 6631 HpaI GTT'AAC Cuts at: 4221 4221 Size: 6631 KasI G'GCGC_C Cuts at: 2080 3685 2080 Size: 1605 5026 KpnI G_GTAC'C Cuts at: 3956 3956 Size: 6631 MfeI C'AATT_G Cuts at: 4230 4230 Size: 6631 MluI A'CGCG_T Cuts at: 6507 6507 Size: 6631 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 2604 5745 5929 1305 Size: 1299 3141 184 2007 Fragments arranged by size: 3141 2007 1299 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 2246 2678 3440 3497 3725 Size: 54 1425 343 414 432 762 57 228 Cuts at: 3725 10 Size: 2916 Fragments arranged by size: 2916 1425 762 432 414 343 228 57 54 MslI CAynn'nnrTG Cuts at: 518 1166 2889 4589 4948 5107 518 Size: 648 1723 1700 359 159 2042 Fragments arranged by size: 2042 1723 1700 648 359 159 MspA1I CmG'CkG Cuts at: 1606 2179 2440 2524 3108 3572 3630 4047 4724 Size: 573 261 84 584 464 58 417 677 Cuts at: 4724 5872 6117 1606 Size: 1148 245 2120 Fragments arranged by size: 2120 1148 677 584 573 464 417 261 245 84 58 NaeI GCC'GGC Cuts at: 2032 2109 3328 2032 Size: 77 1219 5335 Fragments arranged by size: 5335 1219 77 NarI GG'CG_CC Cuts at: 2081 3686 2081 Size: 1605 5026 NcoI C'CATG_G Cuts at: 513 1065 2160 3267 3726 513 Size: 552 1095 1107 459 3418 Fragments arranged by size: 3418 1107 1095 552 459 NdeI CA'TA_TG Cuts at: 387 387 Size: 6631 NgoMIV G'CCGG_C Cuts at: 2030 2107 3326 2030 Size: 77 1219 5335 Fragments arranged by size: 5335 1219 77 NheI G'CTAG_C Cuts at: 1052 1052 Size: 6631 NotI GC'GGCC_GC Cuts at: 4078 4078 Size: 6631 NspI r_CATG'y Cuts at: 1132 1229 2260 2825 3835 3989 5534 1132 Size: 97 1031 565 1010 154 1545 2229 Fragments arranged by size: 2229 1545 1031 1010 565 154 97 PasI CC'CwG_GG Cuts at: 1348 1348 Size: 6631 PciI A'CATG_T Cuts at: 5530 5530 Size: 6631 PflMI CCAn_nnn'nTGG Cuts at: 1108 2203 3665 3813 1108 Size: 1095 1462 148 3926 Fragments arranged by size: 3926 1462 1095 148 PmeI GTTT'AAAC Cuts at: 3935 3935 Size: 6631 PmlI CAC'GTG Cuts at: 2296 2401 2887 3115 3249 2296 Size: 105 486 228 134 5678 Fragments arranged by size: 5678 486 228 134 105 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 4700 4732 6213 6245 4700 Size: 32 1481 32 5086 Fragments arranged by size: 5086 1481 32 32 PpuMI rG'GwC_Cy Cuts at: 2929 3201 2929 Size: 272 6359 PshAI GACnn'nnGTC Cuts at: 1613 3398 1613 Size: 1785 4846 PsiI TTA'TAA Cuts at: 4201 4201 Size: 6631 PspOMI G'GGCC_C Cuts at: 2066 2072 3141 2066 Size: 6 1069 5556 Fragments arranged by size: 5556 1069 6 PstI C_TGCA'G Cuts at: 830 2345 2523 2624 2661 3983 830 Size: 1515 178 101 37 1322 3478 Fragments arranged by size: 3478 1515 1322 178 101 37 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 6631 PvuII CAG'CTG Cuts at: 2179 2440 2524 3630 2179 Size: 261 84 1106 5180 Fragments arranged by size: 5180 1106 261 84 SalI G'TCGA_C Cuts at: 1936 3973 1936 Size: 2037 4594 SbfI CC_TGCA'GG Cuts at: 3983 3983 Size: 6631 ScaI AGT'ACT Cuts at: 4879 6591 4879 Size: 1712 4919 SexAI A'CCwGG_T Cuts at: 3717 3717 Size: 6631 SfcI C'TryA_G Cuts at: 826 1045 2341 2519 2620 2657 3979 5114 5795 Size: 219 1296 178 101 37 1322 1135 681 Cuts at: 5795 5986 826 Size: 191 1471 Fragments arranged by size: 1471 1322 1296 1135 681 219 191 178 101 37 SfoI GGC'GCC Cuts at: 2082 3687 2082 Size: 1605 5026 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 6631 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 6631 SmaI CCC'GGG Cuts at: 1872 2064 2071 3146 3958 1872 Size: 192 7 1075 812 4545 Fragments arranged by size: 4545 1075 812 192 7 SmlI C'TyrA_G Cuts at: 820 1017 1943 2633 4735 5636 5898 820 Size: 197 926 690 2102 901 262 1553 Fragments arranged by size: 2102 1553 926 901 690 262 197 SnaBI TAC'GTA Cuts at: 493 4422 493 Size: 3929 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 6631 SphI G_CATG'C Cuts at: 1132 2260 3989 1132 Size: 1128 1729 3774 Fragments arranged by size: 3774 1729 1128 SrfI GCCC'GGGC Cuts at: 2071 2071 Size: 6631 SspI AAT'ATT Cuts at: 5 52 4555 5 Size: 47 4503 2081 Fragments arranged by size: 4503 2081 47 StuI AGG'CCT Cuts at: 1517 2429 3086 1517 Size: 912 657 5062 Fragments arranged by size: 5062 912 657 StyI C'CwwG_G Cuts at: 513 1065 2160 2304 2430 2983 3267 3726 4070 Size: 552 1095 144 126 553 284 459 344 Cuts at: 4070 513 Size: 3074 Fragments arranged by size: 3074 1095 553 552 459 344 284 144 126 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 2699 2779 3281 3805 3845 4658 4675 Size: 1255 1119 80 502 524 40 813 17 Cuts at: 4675 4828 5013 5458 325 Size: 153 185 445 1498 Fragments arranged by size: 1498 1255 1119 813 524 502 445 185 153 80 40 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 3318 3792 4877 Size: 274 80 33 51 1443 1341 474 1085 Cuts at: 4877 6589 96 Size: 1712 138 Fragments arranged by size: 1712 1443 1341 1085 474 274 138 80 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 6591 6623 6591 Size: 32 6599 Tth111I GACn'n_nGTC Cuts at: 1316 2285 3907 1316 Size: 969 1622 4040 Fragments arranged by size: 4040 1622 969 XbaI T'CTAG_A Cuts at: 3967 3967 Size: 6631 XcmI CCAnnnn_n'nnnnTGG Cuts at: 3814 3814 Size: 6631 XhoI C'TCGA_G Cuts at: 1943 1943 Size: 6631 XmaI C'CCGG_G Cuts at: 1870 2062 2069 3144 3956 1870 Size: 192 7 1075 812 4545 Fragments arranged by size: 4545 1075 812 192 7 XmnI GAAnn'nnTTC Cuts at: 4760 4760 Size: 6631 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 3396 4439 276 Size: 53 83 186 936 1862 1043 2468 Fragments arranged by size: 2468 1862 1043 936 186 83 53 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI AvrII BamHI BanI BanII BbeI BbsI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI ClaI CspCI DraI DraIII DrdI EaeI EagI EarI EciI Eco57MI EcoNI EcoO109I EcoRI FspI FspAI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NotI NspI PasI PciI PflMI PmeI PmlI PpiI PpuMI PshAI PsiI PspOMI PstI PvuI PvuII SalI SbfI ScaI SexAI SfcI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SrfI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AfeI AloI AscI BaeI BbvCI BfrBI BplI BsiWI BstZ17I EcoICRI EcoRV FalI FseI NruI NsiI PacI PfoI PspXI PsrI RsrII SacI SacII SanDI SapI SfiI SwaI