################################## # NO CUT ENZYMES ( 119 enzymes) # ################################## AatII Acc65I AclI AcsI AflII AflIII AgeI AhdI Alw44I AocI Aor51HI ApaLI ApoI AscI AseI AsnI Asp700I Asp718I AspEI AspI AvrII BamHI BbrPI BcgI BciVI BfaI BfrI BglII BlnI BlpI Bpu1102I BsaAI BsaBI BsgI BsiWI BsmI Bsp1407I BspDI BspLU11I BsrDI BsrGI BsrI BssHII BssSI Bst1107I BstBI BstEII BstPI BstZ17I Bsu36I CelII ClaI CpoI DraI DraIII DrdI Eam1105I Eco47III Eco81I EcoNI EcoO65I EcoRI EcoRV EcoT14I EcoT22I FseI HindIII HpaI KpnI KspI MaeI MamI MfeI MluI MunI NcoI NdeI NheI NotI NruI NsiI NspV PacI PflFI PinAI PmaCI PmeI PmlI PpuMI PshAI PshBI Psp1406I PvuI RsrII SacI SacII SapI SbfI ScaI SexAI SfiI SfuI SgrAI SmaI SnaBI SpeI SphI Sse8387I SspBI SspI StuI StyI SwaI Tsp509I Tth111I XbaI XmaCI XmaI XmnI ################################### # ONE CUT ENZYMES ( 60 enzymes) # ################################### AccIII 77 TCCGGA T^CCGGA AcyI 832 GGCGCC G[GA]^CG[CT]C ApaI 668 GGGCCC GGGCC^C AvaII 96 GGTCC G^G[AT]CC AviII 632 TGCGCA TGC^GCA BalI 236 TGGCCA TGG^CCA BanI 832 GGCGCC G^G[CT][GA]CC BanII 668 GGGCCC G[GA]GC[CT]^C BbeI 832 GGCGCC GGCGC^C BbvCI 663 GCTGAGG CCTCAGC(-5/-2) BclI 728 TGATCA T^GATCA BglI 157 GCCGAGATGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC BsaHI 832 GGCGCC G[GA]^CG[CT]C BsaI 577 GAGACC GGTCTC(1/5) BsaWI 77 TCCGGA [AT]^CCGG[AT] BseAI 77 TCCGGA T^CCGGA BsiEI 440 CGGCCG CG[GA][CT]^CG BsmBI 856 CGTCTC CGTCTC(1/5) BsmFI 97 GTCCC GGGAC(10/14) BspEI 77 TCCGGA T^CCGGA BspHI 608 TCATGA T^CATGA BspMI 773 ACCTGC ACCTGC(4/8) BstAPI 57 GCAGGAGCTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC BstXI 413 CCAGGGGTCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG BstYI 74 AGATCC [GA]^GATC[CT] DsaI 638 CCACGG C^C[GA][CT]GG EagI 440 CGGCCG C^GGCCG EarI 12 GAAGAG CTCTTC(1/4) EclXI 440 CGGCCG C^GGCCG Eco52I 440 CGGCCG C^GGCCG FbaI 728 TGATCA T^GATCA FspI 632 TGCGCA TGC^GCA HgaI 855 GCGTC GACGC(5/10) Hin1I 832 GGCGCC G[GA]^CG[CT]C HincII 544 GTCGAC GT[CT]^[GA]AC HindII 544 GTCGAC GT[CT]^[GA]AC HphI 702 GGTGA GGTGA(8/7) KasI 832 GGCGCC G^GCGCC Ksp632I 12 GAAGAG CTCTTC(1/4) MaeIII 814 GTGAC ^GT[ACGT]AC MflI 74 AGATCC [GA]^GATC[CT] MluNI 236 TGGCCA TGG^CCA MroI 77 TCCGGA T^CCGGA MscI 236 TGGCCA TGG^CCA MseI 85 TTAA T^TAA MslI 696 CATCGAGGTG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG NarI 832 GGCGCC GG^CGCC NspI 455 GCATGT [GA]CATG^[CT] PaeR7I 823 CTCGAG C^TCGAG PstI 64 CTGCAG CTGCA^G RcaI 608 TCATGA T^CATGA SalI 544 GTCGAC G^TCGAC SfoI 832 GGCGCC GGC^GCC SmlI 823 CTCGAG C^T[CT][GA]AG Tru9I 85 TTAA T^TAA Tsp45I 814 GTGAC ^GT[GC]AC TspRI 451 CACTG CA[GC]TG[ACGT][ACGT]^ XcmI 239 CCAAGATGAATCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XhoI 823 CTCGAG C^TCGAG XhoII 74 AGATCC [GA]^GATC[CT] ################################### # TWO CUT ENZYMES ( 24 enzymes) # ################################### AccI 544 GTCGAC GT^[AC][GT]AC 769 GTCTAC AfaI 459 GTAC GT^AC 744 GTAC AlwNI 58 CAGGAGCTG CAG[ACGT][ACGT][ACGT]^CTG 181 CAGGAGCTG AvaI 574 CCCGAG C^[CT]CG[GA]G 823 CTCGAG BbsI 229 GAAGAC GAAGAC(2/6) 687 GAAGAC BcnI 438 CCCGG CC^[GC]GG 839 CCGGG BpuAI 229 GAAGAC GAAGAC(2/6) 687 GAAGAC BsmAI 577 GAGAC GTCTC(1/5) 857 GTCTC BsoBI 574 CCCGAG C^[CT]CG[GA]G 823 CTCGAG BsrBI 267 CCGCTC CCGCTC(-3/-3) 820 CCGCTC DraII 667 AGGGCCC [GA]G^G[ACGT]CC[CT] 668 GGGCCCT EcoO109I 667 AGGGCCC [GA]G^G[ACGT]CC[CT] 668 GGGCCCT HaeII 320 AGCGCC [GA]GCGC^[CT] 832 GGCGCC MspA1I 478 CAGCTG C[AC]G^C[GT]G 655 CAGCTG NaeI 364 GCCGGC GCC^GGC 829 GCCGGC NciI 438 CCCGG CC^[GC]GG 839 CCGGG NgoMIV 364 GCCGGC G^CCGGC 829 GCCGGC PflMI 135 CCAAGACGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 638 CCACGGCATGG PvuII 478 CAGCTG CAG^CTG 655 CAGCTG RsaI 459 GTAC GT^AC 744 GTAC SfaNI 504 GATGC GCATC(5/9) 332 GCATC SfcI 64 CTGCAG C^T[GA][CT]AG 786 CTACAG TfiI 217 GAATC G^A[AT]TC 246 GAATC Van91I 135 CCAAGACGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 638 CCACGGCATGG ######################################### # 3 OR MORE CUT ENZYMES ( 55 enzymes) # ######################################### AccII AciI AluI AlwI AspHI BbvI BmyI BpmI BsaJI BseRI BsiHKAI BsiYI BslI Bsp1286I BsrFI BssKI BstF5I BstNI BstUI Cac8I CfoI Cfr10I Cfr13I DdeI DpnII EaeI EcoRII FauI Fnu4HI FokI HaeIII HapII HhaI HinP1I HinfI HpaII ItaI MaeII MboI MboII MnlI MspI MvaI MvnI MwoI NdeII NlaIII NlaIV PleI Sau3AI Sau96I ScrFI TaqI TseI TthHB8I