FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5370, 288 aa 1>>>pF1KE5370 288 - 288 aa - 288 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.5980+/-0.000425; mu= 0.3592+/- 0.026 mean_var=188.6164+/-37.464, 0's: 0 Z-trim(116.9): 27 B-trim: 0 in 0/56 Lambda= 0.093387 statistics sampled from 28385 (28411) to 28385 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.688), E-opt: 0.2 (0.333), width: 16 Scan time: 7.210 The best scores are: opt bits E(85289) NP_997203 (OMIM: 300714) OTU domain-containing pro ( 288) 1878 265.2 1.1e-70 NP_057107 (OMIM: 612021) OTU domain-containing pro ( 323) 1057 154.6 2.3e-37 NP_001273674 (OMIM: 612021) OTU domain-containing ( 192) 719 108.9 7.8e-24 XP_011515431 (OMIM: 612021) PREDICTED: OTU domain- ( 192) 719 108.9 7.8e-24 >>NP_997203 (OMIM: 300714) OTU domain-containing protein (288 aa) initn: 1878 init1: 1878 opt: 1878 Z-score: 1390.3 bits: 265.2 E(85289): 1.1e-70 Smith-Waterman score: 1878; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288) 10 20 30 40 50 60 pF1KE5 MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKTDKTKRKQLLQDVARMEAEMAQKHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKTDKTKRKQLLQDVARMEAEMAQKHR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 QELEKFQDDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 QELEKFQDDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LAGFKREEEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLVFSVSVEMLRCRTASYMKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 LAGFKREEEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLVFSVSVEMLRCRTASYMKK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 HVDEFLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 HVDEFLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADS 190 200 210 220 230 240 250 260 270 280 pF1KE5 PTLIIGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAAGGVLPRLL :::::::::::::::::::::::::::::::::::::::::::::::: NP_997 PTLIIGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAAGGVLPRLL 250 260 270 280 >>NP_057107 (OMIM: 612021) OTU domain-containing protein (323 aa) initn: 1037 init1: 507 opt: 1057 Z-score: 791.8 bits: 154.6 E(85289): 2.3e-37 Smith-Waterman score: 1057; 56.7% identity (85.5% similar) in 275 aa overlap (7-275:41-314) 10 20 30 pF1KE5 MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKT :....::::..:..::::.:...::.:::. NP_057 KVPTSRCRFLLARVLGYLVVMEAVLTEELDEEEQLLRRHRKEKKELQAKIQGMKNAVPKN 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE5 DKTKRKQLLQDVARMEAEMAQKHRQELEKFQ---DDSSIESVVEDLAKMNLENRPPRSSK :: .:::: .:::..: :: ::::.:::... ...:.::. ..... :::.::: :: NP_057 DKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTTKENKIDSVAVNISNLVLENQPPRISK 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE5 AHRKRERMESEERERQESIFQAEMSEHLAGFKREEEEKLAAILGARGLEMKAIPADGHCM :...::. . :.::.: : .::. :.:.: .. : :::: ::.:: ::.: ::.::::: NP_057 AQKRREKKAALEKEREERIAEAEI-ENLTGARHMESEKLAQILAARQLEIKQIPSDGHCM 140 150 160 170 180 160 170 180 190 200 210 pF1KE5 YRAIQDQLV---FSVSVEMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFMIYCDNI :.::.::: ...: :: .:: ::..::..::::..::.:.: . ..:. ::..: NP_057 YKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDI 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE5 VRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIGEEYVKKPIILVYLRYAYSLGEHYN : :.:::::::::::::.:.::::.:::::: .:.:::: :::.::::.:.::.:::::: NP_057 VNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEYSKKPLILVYMRHAYGLGEHYN 250 260 270 280 290 300 280 pF1KE5 SVTPLEAGAAGGVLPRLL ::: : NP_057 SVTRLVNIVTENCS 310 320 >>NP_001273674 (OMIM: 612021) OTU domain-containing prot (192 aa) initn: 703 init1: 507 opt: 719 Z-score: 548.9 bits: 108.9 E(85289): 7.8e-24 Smith-Waterman score: 719; 59.7% identity (84.0% similar) in 181 aa overlap (98-275:4-183) 70 80 90 100 110 120 pF1KE5 DDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEHLAGFKRE .:. . :.::.: : .::. :.:.: .. NP_001 MISKEKKAALEKEREERIAEAEI-ENLTGARHM 10 20 30 130 140 150 160 170 180 pF1KE5 EEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLV---FSVSVEMLRCRTASYMKKHVDE : :::: ::.:: ::.: ::.::::::.::.::: ...: :: .:: ::..::.. NP_001 ESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVED 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE5 FLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLI ::::..::.:.: . ..:. ::..:: :.:::::::::::::.:.::::.:::::: .: NP_001 FLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPII 100 110 120 130 140 150 250 260 270 280 pF1KE5 IGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAAGGVLPRLL .:::: :::.::::.:.::.::::::::: : NP_001 VGEEYSKKPLILVYMRHAYGLGEHYNSVTRLVNIVTENCS 160 170 180 190 >>XP_011515431 (OMIM: 612021) PREDICTED: OTU domain-cont (192 aa) initn: 703 init1: 507 opt: 719 Z-score: 548.9 bits: 108.9 E(85289): 7.8e-24 Smith-Waterman score: 719; 59.7% identity (84.0% similar) in 181 aa overlap (98-275:4-183) 70 80 90 100 110 120 pF1KE5 DDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEHLAGFKRE .:. . :.::.: : .::. :.:.: .. XP_011 MISKEKKAALEKEREERIAEAEI-ENLTGARHM 10 20 30 130 140 150 160 170 180 pF1KE5 EEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLV---FSVSVEMLRCRTASYMKKHVDE : :::: ::.:: ::.: ::.::::::.::.::: ...: :: .:: ::..::.. XP_011 ESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVED 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE5 FLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLI ::::..::.:.: . ..:. ::..:: :.:::::::::::::.:.::::.:::::: .: XP_011 FLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPII 100 110 120 130 140 150 250 260 270 280 pF1KE5 IGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAAGGVLPRLL .:::: :::.::::.:.::.::::::::: : XP_011 VGEEYSKKPLILVYMRHAYGLGEHYNSVTRLVNIVTENCS 160 170 180 190 288 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:35:26 2016 done: Tue Nov 8 07:35:27 2016 Total Scan time: 7.210 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]