FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5370, 288 aa 1>>>pF1KE5370 288 - 288 aa - 288 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1860+/-0.00107; mu= 2.6981+/- 0.064 mean_var=172.5367+/-34.560, 0's: 0 Z-trim(109.1): 20 B-trim: 15 in 1/51 Lambda= 0.097641 statistics sampled from 10612 (10623) to 10612 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.326), width: 16 Scan time: 2.580 The best scores are: opt bits E(32554) CCDS14395.1 OTUD6A gene_id:139562|Hs108|chrX ( 288) 1878 276.4 1.7e-74 CCDS6253.2 OTUD6B gene_id:51633|Hs108|chr8 ( 323) 1057 160.8 1.2e-39 CCDS69513.1 OTUD6B gene_id:51633|Hs108|chr8 ( 192) 719 113.0 1.7e-25 >>CCDS14395.1 OTUD6A gene_id:139562|Hs108|chrX (288 aa) initn: 1878 init1: 1878 opt: 1878 Z-score: 1451.1 bits: 276.4 E(32554): 1.7e-74 Smith-Waterman score: 1878; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288) 10 20 30 40 50 60 pF1KE5 MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKTDKTKRKQLLQDVARMEAEMAQKHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKTDKTKRKQLLQDVARMEAEMAQKHR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 QELEKFQDDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 QELEKFQDDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LAGFKREEEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLVFSVSVEMLRCRTASYMKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LAGFKREEEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLVFSVSVEMLRCRTASYMKK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 HVDEFLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 HVDEFLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADS 190 200 210 220 230 240 250 260 270 280 pF1KE5 PTLIIGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAAGGVLPRLL :::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PTLIIGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAAGGVLPRLL 250 260 270 280 >>CCDS6253.2 OTUD6B gene_id:51633|Hs108|chr8 (323 aa) initn: 1037 init1: 507 opt: 1057 Z-score: 825.4 bits: 160.8 E(32554): 1.2e-39 Smith-Waterman score: 1057; 56.7% identity (85.5% similar) in 275 aa overlap (7-275:41-314) 10 20 30 pF1KE5 MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKT :....::::..:..::::.:...::.:::. CCDS62 KVPTSRCRFLLARVLGYLVVMEAVLTEELDEEEQLLRRHRKEKKELQAKIQGMKNAVPKN 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE5 DKTKRKQLLQDVARMEAEMAQKHRQELEKFQ---DDSSIESVVEDLAKMNLENRPPRSSK :: .:::: .:::..: :: ::::.:::... ...:.::. ..... :::.::: :: CCDS62 DKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTTKENKIDSVAVNISNLVLENQPPRISK 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE5 AHRKRERMESEERERQESIFQAEMSEHLAGFKREEEEKLAAILGARGLEMKAIPADGHCM :...::. . :.::.: : .::. :.:.: .. : :::: ::.:: ::.: ::.::::: CCDS62 AQKRREKKAALEKEREERIAEAEI-ENLTGARHMESEKLAQILAARQLEIKQIPSDGHCM 140 150 160 170 180 160 170 180 190 200 210 pF1KE5 YRAIQDQLV---FSVSVEMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFMIYCDNI :.::.::: ...: :: .:: ::..::..::::..::.:.: . ..:. ::..: CCDS62 YKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDI 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE5 VRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIGEEYVKKPIILVYLRYAYSLGEHYN : :.:::::::::::::.:.::::.:::::: .:.:::: :::.::::.:.::.:::::: CCDS62 VNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEYSKKPLILVYMRHAYGLGEHYN 250 260 270 280 290 300 280 pF1KE5 SVTPLEAGAAGGVLPRLL ::: : CCDS62 SVTRLVNIVTENCS 310 320 >>CCDS69513.1 OTUD6B gene_id:51633|Hs108|chr8 (192 aa) initn: 703 init1: 507 opt: 719 Z-score: 571.3 bits: 113.0 E(32554): 1.7e-25 Smith-Waterman score: 719; 59.7% identity (84.0% similar) in 181 aa overlap (98-275:4-183) 70 80 90 100 110 120 pF1KE5 DDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEHLAGFKRE .:. . :.::.: : .::. :.:.: .. CCDS69 MISKEKKAALEKEREERIAEAEI-ENLTGARHM 10 20 30 130 140 150 160 170 180 pF1KE5 EEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLV---FSVSVEMLRCRTASYMKKHVDE : :::: ::.:: ::.: ::.::::::.::.::: ...: :: .:: ::..::.. CCDS69 ESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVED 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE5 FLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLI ::::..::.:.: . ..:. ::..:: :.:::::::::::::.:.::::.:::::: .: CCDS69 FLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPII 100 110 120 130 140 150 250 260 270 280 pF1KE5 IGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAAGGVLPRLL .:::: :::.::::.:.::.::::::::: : CCDS69 VGEEYSKKPLILVYMRHAYGLGEHYNSVTRLVNIVTENCS 160 170 180 190 288 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:35:26 2016 done: Tue Nov 8 07:35:26 2016 Total Scan time: 2.580 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]