FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6693, 318 aa 1>>>pF1KE6693 318 - 318 aa - 318 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6325+/-0.000503; mu= 8.8615+/- 0.031 mean_var=215.1582+/-47.297, 0's: 0 Z-trim(115.6): 427 B-trim: 93 in 1/49 Lambda= 0.087437 statistics sampled from 25540 (26134) to 25540 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.306), width: 16 Scan time: 5.360 The best scores are: opt bits E(85289) NP_569059 (OMIM: 300891) ankyrin repeat and SOCS b ( 318) 2111 279.5 6.2e-75 NP_001035535 (OMIM: 605758) ankyrin repeat and SOC ( 335) 582 86.7 7.4e-17 NP_001317125 (OMIM: 605758) ankyrin repeat and SOC ( 234) 305 51.5 2e-06 NP_665862 (OMIM: 605760) ankyrin repeat and SOCS b ( 445) 266 47.0 8.7e-05 NP_001188894 (OMIM: 605760) ankyrin repeat and SOC ( 445) 266 47.0 8.7e-05 NP_001183959 (OMIM: 610500) ankyrin repeat and KH ( 581) 267 47.3 9.3e-05 NP_057199 (OMIM: 605760) ankyrin repeat and SOCS b ( 518) 266 47.1 9.5e-05 NP_060448 (OMIM: 610500) ankyrin repeat and KH dom ( 616) 267 47.3 9.6e-05 NP_078944 (OMIM: 610500) ankyrin repeat and KH dom ( 627) 267 47.3 9.7e-05 NP_060217 (OMIM: 610500) ankyrin repeat and KH dom (2542) 267 48.2 0.00022 XP_016863506 (OMIM: 615929) PREDICTED: ankyrin rep (1116) 259 46.7 0.00027 XP_016863505 (OMIM: 615929) PREDICTED: ankyrin rep (1229) 259 46.7 0.00029 XP_016863504 (OMIM: 615929) PREDICTED: ankyrin rep (1367) 259 46.8 0.00031 XP_016863503 (OMIM: 615929) PREDICTED: ankyrin rep (1479) 259 46.8 0.00032 XP_005265730 (OMIM: 615929) PREDICTED: ankyrin rep (1480) 259 46.8 0.00032 XP_005265729 (OMIM: 615929) PREDICTED: ankyrin rep (1543) 259 46.9 0.00033 XP_016863502 (OMIM: 615929) PREDICTED: ankyrin rep (2238) 259 47.1 0.00041 XP_016863501 (OMIM: 615929) PREDICTED: ankyrin rep (2239) 259 47.1 0.00041 XP_005265728 (OMIM: 615929) PREDICTED: ankyrin rep (2351) 259 47.1 0.00042 NP_942592 (OMIM: 615929) ankyrin repeat domain-con (2352) 259 47.1 0.00042 XP_016863500 (OMIM: 615929) PREDICTED: ankyrin rep (2489) 259 47.1 0.00043 NP_001273700 (OMIM: 615929) ankyrin repeat domain- (2490) 259 47.1 0.00043 NP_056389 (OMIM: 615929) ankyrin repeat domain-con (2602) 259 47.2 0.00045 NP_115593 (OMIM: 615929) ankyrin repeat domain-con (2603) 259 47.2 0.00045 NP_076992 (OMIM: 300890) ankyrin repeat and SOCS b ( 262) 218 40.6 0.0042 NP_001162003 (OMIM: 300890) ankyrin repeat and SOC ( 262) 218 40.6 0.0042 NP_001026909 (OMIM: 300890) ankyrin repeat and SOC ( 294) 218 40.7 0.0045 XP_005274503 (OMIM: 300890) PREDICTED: ankyrin rep ( 294) 218 40.7 0.0045 XP_016884774 (OMIM: 300890) PREDICTED: ankyrin rep ( 345) 218 40.8 0.005 XP_016884775 (OMIM: 300890) PREDICTED: ankyrin rep ( 345) 218 40.8 0.005 XP_016884772 (OMIM: 300890) PREDICTED: ankyrin rep ( 377) 218 40.8 0.0052 XP_011538517 (OMIM: 607128) PREDICTED: tankyrase-2 ( 695) 222 41.7 0.0053 NP_065210 (OMIM: 182900,612641) ankyrin-1 isoform (1719) 228 43.0 0.0053 XP_011542807 (OMIM: 182900,612641) PREDICTED: anky (1751) 228 43.0 0.0053 XP_011542806 (OMIM: 182900,612641) PREDICTED: anky (1752) 228 43.0 0.0053 XP_016868818 (OMIM: 182900,612641) PREDICTED: anky (1759) 228 43.0 0.0053 XP_011542805 (OMIM: 182900,612641) PREDICTED: anky (1791) 228 43.0 0.0054 XP_016868817 (OMIM: 182900,612641) PREDICTED: anky (1792) 228 43.0 0.0054 XP_016868816 (OMIM: 182900,612641) PREDICTED: anky (1807) 228 43.0 0.0054 NP_065208 (OMIM: 182900,612641) ankyrin-1 isoform (1856) 228 43.1 0.0055 NP_000028 (OMIM: 182900,612641) ankyrin-1 isoform (1880) 228 43.1 0.0055 NP_065209 (OMIM: 182900,612641) ankyrin-1 isoform (1881) 228 43.1 0.0055 XP_011542804 (OMIM: 182900,612641) PREDICTED: anky (1889) 228 43.1 0.0056 XP_016868815 (OMIM: 182900,612641) PREDICTED: anky (1892) 228 43.1 0.0056 NP_001135918 (OMIM: 182900,612641) ankyrin-1 isofo (1897) 228 43.1 0.0056 XP_016868814 (OMIM: 182900,612641) PREDICTED: anky (1908) 228 43.1 0.0056 XP_011542803 (OMIM: 182900,612641) PREDICTED: anky (1913) 228 43.1 0.0056 XP_011542802 (OMIM: 182900,612641) PREDICTED: anky (1914) 228 43.1 0.0056 XP_005273533 (OMIM: 182900,612641) PREDICTED: anky (1921) 228 43.1 0.0056 XP_016868813 (OMIM: 182900,612641) PREDICTED: anky (1922) 228 43.1 0.0056 >>NP_569059 (OMIM: 300891) ankyrin repeat and SOCS box p (318 aa) initn: 2111 init1: 2111 opt: 2111 Z-score: 1466.3 bits: 279.5 E(85289): 6.2e-75 Smith-Waterman score: 2111; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE6 MRIVLQLAKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAVYDNDSYTLDQLLRQERY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 MRIVLQLAKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAVYDNDSYTLDQLLRQERY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KRFINSRSGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLDVKAQTPLFTAVSHGHLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 KRFINSRSGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLDVKAQTPLFTAVSHGHLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 CVRVLLEAGASPGGSIYNNCSPVLTAARDGAVAILQELLDHGAEANVKAKLPVWASNIAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 CVRVLLEAGASPGGSIYNNCSPVLTAARDGAVAILQELLDHGAEANVKAKLPVWASNIAS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 CSGPLYLAAVYGHLDCFRLLLLHGADPDYNCTDQGLLARVPRPRTLLEICLHHNCEPEYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 CSGPLYLAAVYGHLDCFRLLLLHGADPDYNCTDQGLLARVPRPRTLLEICLHHNCEPEYI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 QLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQVRLVVRRALCQAGQPQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 QLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQVRLVVRRALCQAGQPQA 250 260 270 280 290 300 310 pF1KE6 INQLDIPPMLISYLKHQL :::::::::::::::::: NP_569 INQLDIPPMLISYLKHQL 310 >>NP_001035535 (OMIM: 605758) ankyrin repeat and SOCS bo (335 aa) initn: 684 init1: 303 opt: 582 Z-score: 423.7 bits: 86.7 E(85289): 7.4e-17 Smith-Waterman score: 647; 39.8% identity (68.4% similar) in 304 aa overlap (35-317:37-335) 10 20 30 40 50 60 pF1KE6 LQLAKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAVYDNDSYTLDQLLRQERYKRFI : :..:.: .: :: .::..: :. : NP_001 PDGRAGPGSAGRNLKEWLREQFCDHPLEHCEDTRLHDAAYVGDLQTLRSLLQEESYRSRI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NSRSGW--G-VPGTPLRLAASYGHLSCLQVLLAHGADVDSLDVKAQTPLFTAVSHGHLDC : .: : : .: ::::.::. :: ::.. :. .::.:: .:::.:: :..:: .:::. NP_001 NEKSVWCCGWLPCTPLRIAATAGHGSCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLES 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 VRVLLEAGASPGGSIYNNCSPVLTAARDGAVAILQELLDHGAEANVKAKL-----PVWAS ...::::::.:.:: .. .:: :.: : . ::. :. .::...:. .: : .. NP_001 TQILLEAGADPNGSRHHRSTPVYHASRVGRADILKALIRYGADVDVNHHLTPDVQPRFSR 130 140 150 160 170 180 180 190 200 210 220 pF1KE6 NIAS---CSGPLYLAAVYGHLDCFRLLLLHGADPDYNCTD----QGLLARVPRPRTLLEI ..: : :::..:.: .:.::::::: ::.::.::. ::. : ... NP_001 RLTSLVVC--PLYISAAYHNLQCFRLLLLAGANPDFNCNGPVNTQGFYR--GSPGCVMDA 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE6 CLHHNCEPEYIQLLIDFGANIYLPSL-SLDLTSQ-----DDKGIALLLQARATPRSLLSQ :.:.:: ...::..::::. : . :: :. : ... .. .::..::.:: NP_001 VLRHGCEAAFVSLLVEFGANLNLVKWESLGPESRGRRKVDPEALQVFKEARSVPRTLLCL 250 260 270 280 290 300 290 300 310 pF1KE6 VRLVVRRALCQAGQPQAINQLDIPPMLISYLKHQL :..::::: . . . : .: .: . ..: :. NP_001 CRVAVRRALGKH-RLHLIPSLPLPDPIKKFLLHE 310 320 330 >>NP_001317125 (OMIM: 605758) ankyrin repeat and SOCS bo (234 aa) initn: 324 init1: 146 opt: 305 Z-score: 236.4 bits: 51.5 E(85289): 2e-06 Smith-Waterman score: 305; 33.7% identity (64.5% similar) in 169 aa overlap (159-317:71-234) 130 140 150 160 170 180 pF1KE6 GASPGGSIYNNCSPVLTAARDGAVAILQELLDHGAEANVKAKLPVWASNIASCSGPLYLA ..: .:. .. .... : :::.. NP_001 LHDAAYVGDLQTLRSLLQEESYRRYGADVDVNHHLTPDVQPRFSRRLTSLVVC--PLYIS 50 60 70 80 90 190 200 210 220 230 240 pF1KE6 AVYGHLDCFRLLLLHGADPDYNCTD----QGLLARVPRPRTLLEICLHHNCEPEYIQLLI :.: .:.::::::: ::.::.::. ::. : ... :.:.:: ...::. NP_001 AAYHNLQCFRLLLLAGANPDFNCNGPVNTQGFYR--GSPGCVMDAVLRHGCEAAFVSLLV 100 110 120 130 140 150 250 260 270 280 290 pF1KE6 DFGANIYLPSL-SLDLTSQ-----DDKGIALLLQARATPRSLLSQVRLVVRRALCQAGQP .::::. : . :: :. : ... .. .::..::.:: :..::::: . . NP_001 EFGANLNLVKWESLGPESRGRRKVDPEALQVFKEARSVPRTLLCLCRVAVRRALGKH-RL 160 170 180 190 200 210 300 310 pF1KE6 QAINQLDIPPMLISYLKHQL . : .: .: . ..: :. NP_001 HLIPSLPLPDPIKKFLLHE 220 230 >>NP_665862 (OMIM: 605760) ankyrin repeat and SOCS box p (445 aa) initn: 404 init1: 178 opt: 266 Z-score: 207.0 bits: 47.0 E(85289): 8.7e-05 Smith-Waterman score: 277; 30.8% identity (60.6% similar) in 221 aa overlap (38-250:76-271) 10 20 30 40 50 60 pF1KE6 AKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAVYDNDSYTLDQLLRQERYKRFINSR .:.:: ..... . :::. :. . NP_665 AVENGQIDVLRLLLQHGANVNGSHSMCGWNSLHQASFQENAEIIKLLLRKGANKE---CQ 50 60 70 80 90 100 70 80 90 100 110 120 pF1KE6 SGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLDVKAQTPLFTAVSHGHLDCVRVLLE . .:. ::: .::.::.: :..:.. ::.:. . :::: :...:: ::..:: NP_665 DDFGI--TPLFVAAQYGKLESLSILISSGANVNCQALDKATPLFIAAQEGHTKCVELLLS 110 120 130 140 150 160 130 140 150 160 170 180 pF1KE6 AGASPGGSIYNNCS----PVLTAARDGAVAILQELLDHGAEANVKAKLPVWASNIASCSG .::.: ..: : . :. .::. : . ::. :. .: ... . : NP_665 SGADP--DLYCNEDSWQLPIHAAAQMGHTKILDLLIPLTNRAC--------DTGLNKVS- 170 180 190 200 190 200 210 220 230 pF1KE6 PLYLAAVYGHLDCFRLLLLHGADPDYN-CTDQGLLARVPRPRTLLEICL--HHNCEPE-Y :.: :. :: ::...:: .: .:: . : :. . : .:. ...:: NP_665 PVYSAVFGGHEDCLEILLRNGYSPDAQACLVFGFSS----P-----VCMAFQKDCEFFGI 210 220 230 240 250 260 240 250 260 270 280 290 pF1KE6 IQLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQVRLVVRRALCQAGQPQ ...:. .::.: NP_665 VNILLKYGAQINELHLAYCLKYEKFSIFRYFLRKGCSLGPWNHIYEFVNHAIKAQAKYKE 270 280 290 300 310 320 >>NP_001188894 (OMIM: 605760) ankyrin repeat and SOCS bo (445 aa) initn: 404 init1: 178 opt: 266 Z-score: 207.0 bits: 47.0 E(85289): 8.7e-05 Smith-Waterman score: 277; 30.8% identity (60.6% similar) in 221 aa overlap (38-250:76-271) 10 20 30 40 50 60 pF1KE6 AKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAVYDNDSYTLDQLLRQERYKRFINSR .:.:: ..... . :::. :. . NP_001 AVENGQIDVLRLLLQHGANVNGSHSMCGWNSLHQASFQENAEIIKLLLRKGANKE---CQ 50 60 70 80 90 100 70 80 90 100 110 120 pF1KE6 SGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLDVKAQTPLFTAVSHGHLDCVRVLLE . .:. ::: .::.::.: :..:.. ::.:. . :::: :...:: ::..:: NP_001 DDFGI--TPLFVAAQYGKLESLSILISSGANVNCQALDKATPLFIAAQEGHTKCVELLLS 110 120 130 140 150 160 130 140 150 160 170 180 pF1KE6 AGASPGGSIYNNCS----PVLTAARDGAVAILQELLDHGAEANVKAKLPVWASNIASCSG .::.: ..: : . :. .::. : . ::. :. .: ... . : NP_001 SGADP--DLYCNEDSWQLPIHAAAQMGHTKILDLLIPLTNRAC--------DTGLNKVS- 170 180 190 200 190 200 210 220 230 pF1KE6 PLYLAAVYGHLDCFRLLLLHGADPDYN-CTDQGLLARVPRPRTLLEICL--HHNCEPE-Y :.: :. :: ::...:: .: .:: . : :. . : .:. ...:: NP_001 PVYSAVFGGHEDCLEILLRNGYSPDAQACLVFGFSS----P-----VCMAFQKDCEFFGI 210 220 230 240 250 260 240 250 260 270 280 290 pF1KE6 IQLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQVRLVVRRALCQAGQPQ ...:. .::.: NP_001 VNILLKYGAQINELHLAYCLKYEKFSIFRYFLRKGCSLGPWNHIYEFVNHAIKAQAKYKE 270 280 290 300 310 320 >>NP_001183959 (OMIM: 610500) ankyrin repeat and KH doma (581 aa) initn: 460 init1: 206 opt: 267 Z-score: 206.4 bits: 47.3 E(85289): 9.3e-05 Smith-Waterman score: 309; 33.1% identity (58.4% similar) in 245 aa overlap (14-258:217-439) 10 20 30 40 pF1KE6 MRIVLQLAKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAV :.. . .::. . .. ::: ..: . NP_001 AAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNE-HTEEGESLLCLA 190 200 210 220 230 240 50 60 70 80 90 100 pF1KE6 YDNDSYTLDQLLRQERYKRFINSRSGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLD . : : :.: . . ...:.. : ::: :.: :.:. ...:: : :::.: . NP_001 CSAGYYELAQVLLAMHAN--VEDRGNKG-DITPLMAASSGGYLDIVKLLLLHDADVNSQS 250 260 270 280 290 300 110 120 130 140 150 160 pF1KE6 VKAQTPLFTAVSHGHLDCVRVLLEAGASPGGSIYNNCSPVLTAARDGAVAILQELLDHGA . ..: : : . : .: :.:::. ::. :. .:.. :: : : . . :::::: NP_001 ATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGA 310 320 330 340 350 360 170 180 190 200 210 220 pF1KE6 EANVKAKLPVWASNIASCSGPLYLAAVYGHLDCFRLLLLHGADPDYNCTDQGLLARVPRP :.. :: . :. : :: :::: :.:: ::: ... ::. : NP_001 GINTH-------SNEFKESA-LTLACYKGHLDMVRFLLEAGADQEHK-TDEMHTA----- 370 380 390 400 230 240 250 260 270 280 pF1KE6 RTLLEICLHHNCEPEYIQLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQ :.: :. . : .::.: ::.. .:. :.. NP_001 --LMEACMDGHVE--VARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANL 410 420 430 440 450 460 290 300 310 pF1KE6 VRLVVRRALCQAGQPQAINQLDIPPMLISYLKHQL NP_001 EEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFL 470 480 490 500 510 520 >>NP_057199 (OMIM: 605760) ankyrin repeat and SOCS box p (518 aa) initn: 404 init1: 178 opt: 266 Z-score: 206.3 bits: 47.1 E(85289): 9.5e-05 Smith-Waterman score: 277; 30.8% identity (60.6% similar) in 221 aa overlap (38-250:149-344) 10 20 30 40 50 60 pF1KE6 AKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAVYDNDSYTLDQLLRQERYKRFINSR .:.:: ..... . :::. :. . NP_057 AVENGQIDVLRLLLQHGANVNGSHSMCGWNSLHQASFQENAEIIKLLLRKGANKE---CQ 120 130 140 150 160 170 70 80 90 100 110 120 pF1KE6 SGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLDVKAQTPLFTAVSHGHLDCVRVLLE . .:. ::: .::.::.: :..:.. ::.:. . :::: :...:: ::..:: NP_057 DDFGI--TPLFVAAQYGKLESLSILISSGANVNCQALDKATPLFIAAQEGHTKCVELLLS 180 190 200 210 220 230 130 140 150 160 170 180 pF1KE6 AGASPGGSIYNNCS----PVLTAARDGAVAILQELLDHGAEANVKAKLPVWASNIASCSG .::.: ..: : . :. .::. : . ::. :. .: ... . : NP_057 SGADP--DLYCNEDSWQLPIHAAAQMGHTKILDLLIPLTNRAC--------DTGLNKVS- 240 250 260 270 280 190 200 210 220 230 pF1KE6 PLYLAAVYGHLDCFRLLLLHGADPDYN-CTDQGLLARVPRPRTLLEICL--HHNCEPE-Y :.: :. :: ::...:: .: .:: . : :. . : .:. ...:: NP_057 PVYSAVFGGHEDCLEILLRNGYSPDAQACLVFGFSS----P-----VCMAFQKDCEFFGI 290 300 310 320 330 240 250 260 270 280 290 pF1KE6 IQLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQVRLVVRRALCQAGQPQ ...:. .::.: NP_057 VNILLKYGAQINELHLAYCLKYEKFSIFRYFLRKGCSLGPWNHIYEFVNHAIKAQAKYKE 340 350 360 370 380 390 >>NP_060448 (OMIM: 610500) ankyrin repeat and KH domain- (616 aa) initn: 521 init1: 206 opt: 267 Z-score: 206.2 bits: 47.3 E(85289): 9.6e-05 Smith-Waterman score: 309; 33.1% identity (58.4% similar) in 245 aa overlap (14-258:206-428) 10 20 30 40 pF1KE6 MRIVLQLAKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAV :.. . .::. . .. ::: ..: . NP_060 AAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNE-HTEEGESLLCLA 180 190 200 210 220 230 50 60 70 80 90 100 pF1KE6 YDNDSYTLDQLLRQERYKRFINSRSGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLD . : : :.: . . ...:.. : ::: :.: :.:. ...:: : :::.: . NP_060 CSAGYYELAQVLLAMHAN--VEDRGNKG-DITPLMAASSGGYLDIVKLLLLHDADVNSQS 240 250 260 270 280 290 110 120 130 140 150 160 pF1KE6 VKAQTPLFTAVSHGHLDCVRVLLEAGASPGGSIYNNCSPVLTAARDGAVAILQELLDHGA . ..: : : . : .: :.:::. ::. :. .:.. :: : : . . :::::: NP_060 ATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGA 300 310 320 330 340 350 170 180 190 200 210 220 pF1KE6 EANVKAKLPVWASNIASCSGPLYLAAVYGHLDCFRLLLLHGADPDYNCTDQGLLARVPRP :.. :: . :. : :: :::: :.:: ::: ... ::. : NP_060 GINTH-------SNEFKESA-LTLACYKGHLDMVRFLLEAGADQEHK-TDEMHTA----- 360 370 380 390 230 240 250 260 270 280 pF1KE6 RTLLEICLHHNCEPEYIQLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQ :.: :. . : .::.: ::.. .:. :.. NP_060 --LMEACMDGHVE--VARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANL 400 410 420 430 440 450 290 300 310 pF1KE6 VRLVVRRALCQAGQPQAINQLDIPPMLISYLKHQL NP_060 EEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFL 460 470 480 490 500 510 >>NP_078944 (OMIM: 610500) ankyrin repeat and KH domain- (627 aa) initn: 521 init1: 206 opt: 267 Z-score: 206.1 bits: 47.3 E(85289): 9.7e-05 Smith-Waterman score: 309; 33.1% identity (58.4% similar) in 245 aa overlap (14-258:217-439) 10 20 30 40 pF1KE6 MRIVLQLAKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAV :.. . .::. . .. ::: ..: . NP_078 AAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNE-HTEEGESLLCLA 190 200 210 220 230 240 50 60 70 80 90 100 pF1KE6 YDNDSYTLDQLLRQERYKRFINSRSGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLD . : : :.: . . ...:.. : ::: :.: :.:. ...:: : :::.: . NP_078 CSAGYYELAQVLLAMHAN--VEDRGNKG-DITPLMAASSGGYLDIVKLLLLHDADVNSQS 250 260 270 280 290 300 110 120 130 140 150 160 pF1KE6 VKAQTPLFTAVSHGHLDCVRVLLEAGASPGGSIYNNCSPVLTAARDGAVAILQELLDHGA . ..: : : . : .: :.:::. ::. :. .:.. :: : : . . :::::: NP_078 ATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGA 310 320 330 340 350 360 170 180 190 200 210 220 pF1KE6 EANVKAKLPVWASNIASCSGPLYLAAVYGHLDCFRLLLLHGADPDYNCTDQGLLARVPRP :.. :: . :. : :: :::: :.:: ::: ... ::. : NP_078 GINTH-------SNEFKESA-LTLACYKGHLDMVRFLLEAGADQEHK-TDEMHTA----- 370 380 390 400 230 240 250 260 270 280 pF1KE6 RTLLEICLHHNCEPEYIQLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQ :.: :. . : .::.: ::.. .:. :.. NP_078 --LMEACMDGHVE--VARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANL 410 420 430 440 450 460 290 300 310 pF1KE6 VRLVVRRALCQAGQPQAINQLDIPPMLISYLKHQL NP_078 EEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFL 470 480 490 500 510 520 >>NP_060217 (OMIM: 610500) ankyrin repeat and KH domain- (2542 aa) initn: 617 init1: 206 opt: 267 Z-score: 199.8 bits: 48.2 E(85289): 0.00022 Smith-Waterman score: 309; 33.1% identity (58.4% similar) in 245 aa overlap (14-258:217-439) 10 20 30 40 pF1KE6 MRIVLQLAKMNLMDITKIFSLLQPDKEEEDTDTEEKQALNQAV :.. . .::. . .. ::: ..: . NP_060 AAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNE-HTEEGESLLCLA 190 200 210 220 230 240 50 60 70 80 90 100 pF1KE6 YDNDSYTLDQLLRQERYKRFINSRSGWGVPGTPLRLAASYGHLSCLQVLLAHGADVDSLD . : : :.: . . ...:.. : ::: :.: :.:. ...:: : :::.: . NP_060 CSAGYYELAQVLLAMHAN--VEDRGNKG-DITPLMAASSGGYLDIVKLLLLHDADVNSQS 250 260 270 280 290 300 110 120 130 140 150 160 pF1KE6 VKAQTPLFTAVSHGHLDCVRVLLEAGASPGGSIYNNCSPVLTAARDGAVAILQELLDHGA . ..: : : . : .: :.:::. ::. :. .:.. :: : : . . :::::: NP_060 ATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGA 310 320 330 340 350 360 170 180 190 200 210 220 pF1KE6 EANVKAKLPVWASNIASCSGPLYLAAVYGHLDCFRLLLLHGADPDYNCTDQGLLARVPRP :.. :: . :. : :: :::: :.:: ::: ... ::. : NP_060 GINTH-------SNEFKESA-LTLACYKGHLDMVRFLLEAGADQEHK-TDEMHTA----- 370 380 390 400 230 240 250 260 270 280 pF1KE6 RTLLEICLHHNCEPEYIQLLIDFGANIYLPSLSLDLTSQDDKGIALLLQARATPRSLLSQ :.: :. . : .::.: ::.. .:. :.. NP_060 --LMEACMDGHVE--VARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANL 410 420 430 440 450 460 290 300 310 pF1KE6 VRLVVRRALCQAGQPQAINQLDIPPMLISYLKHQL NP_060 EEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFL 470 480 490 500 510 520 318 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:27:58 2016 done: Tue Nov 8 15:27:59 2016 Total Scan time: 5.360 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]