FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6784, 628 aa 1>>>pF1KE6784 628 - 628 aa - 628 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4671+/-0.000383; mu= 9.6133+/- 0.024 mean_var=131.6899+/-26.518, 0's: 0 Z-trim(116.5): 30 B-trim: 182 in 1/55 Lambda= 0.111763 statistics sampled from 27657 (27687) to 27657 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.325), width: 16 Scan time: 10.250 The best scores are: opt bits E(85289) NP_060564 (OMIM: 300418) eukaryotic peptide chain ( 628) 4166 683.5 6.1e-196 NP_002085 (OMIM: 139259) eukaryotic peptide chain ( 637) 3651 600.4 6.1e-171 NP_001123478 (OMIM: 139259) eukaryotic peptide cha ( 636) 3380 556.7 8.7e-158 NP_001123479 (OMIM: 139259) eukaryotic peptide cha ( 499) 3132 516.7 7.7e-146 NP_001138630 (OMIM: 612450) HBS1-like protein isof ( 642) 1175 201.2 9.3e-51 NP_006611 (OMIM: 612450) HBS1-like protein isoform ( 684) 1175 201.2 9.8e-51 NP_001393 (OMIM: 130590) elongation factor 1-alpha ( 462) 691 123.1 2.2e-27 XP_011533816 (OMIM: 130590) PREDICTED: elongation ( 462) 691 123.1 2.2e-27 NP_001949 (OMIM: 602959,616393,616409) elongation ( 463) 687 122.4 3.4e-27 XP_016879108 (OMIM: 602389,610678) PREDICTED: elon ( 455) 264 54.2 1.2e-06 NP_003312 (OMIM: 602389,610678) elongation factor ( 455) 264 54.2 1.2e-06 XP_011544230 (OMIM: 602389,610678) PREDICTED: elon ( 427) 242 50.7 1.3e-05 >>NP_060564 (OMIM: 300418) eukaryotic peptide chain rele (628 aa) initn: 4166 init1: 4166 opt: 4166 Z-score: 3638.8 bits: 683.5 E(85289): 6.1e-196 Smith-Waterman score: 4166; 99.5% identity (99.5% similar) in 628 aa overlap (1-628:1-628) 10 20 30 40 50 60 pF1KE6 MDSGSSSSDSAPDCWDQVDMESTGSAPSGDGVSSAVAEAQREPLSSAFSRKLNVNAKPFV :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: NP_060 MDSGSSSSDSAPDCWDQVDMESPGSAPSGDGVSSAVAEAQREPLSSAFSRKLNVNAKPFV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 PNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 LEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 EEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 EEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 EAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 EAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDHTVNWSI ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: NP_060 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 ERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 PNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 PNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 ETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYN 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE6 AVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 AVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF 550 560 570 580 590 600 610 620 pF1KE6 PQMGRFTLRDEGKTIAIGKVLKLVQEKD :::::::::::::::::::::::: ::: NP_060 PQMGRFTLRDEGKTIAIGKVLKLVPEKD 610 620 >>NP_002085 (OMIM: 139259) eukaryotic peptide chain rele (637 aa) initn: 3511 init1: 3175 opt: 3651 Z-score: 3189.9 bits: 600.4 E(85289): 6.1e-171 Smith-Waterman score: 3651; 88.2% identity (94.1% similar) in 627 aa overlap (3-628:19-637) 10 20 30 40 pF1KE6 MDSGSSSSDSAPDCWDQVDMESTGSAPSGDGVS-SAVAEAQREP :::::::::::::::.:::. : .: : : : .:.:::::: NP_002 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 LSSAFSRKLNVNAKPFVPNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKR ::.::::.:::::::::::::::::::::::::. :: :::...:.. ::: : NP_002 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPP-PAGGAANNH---GAGSGAG-- 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 MGRGAPVEPSREEPLVSLEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGG ::.:::: :.:: . :::::::.::::::.:::::.::. ::::::..:.::::::: NP_002 -GRAAPVESSQEEQSLC-EGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGG 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE6 GSSGDSGPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQI :: ::. :::::..:::::.::: : :::..: ::::::::::::::::::::::::::: NP_002 GSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQI 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE6 MFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHF :.::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: NP_002 MYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE6 TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH 300 310 320 330 340 350 350 360 370 380 390 400 pF1KE6 LIVLINKMDDHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSD :::::::::: ::::: :::::::::::::::::::.:::::::::::::::::.::::: NP_002 LIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSD 360 370 380 390 400 410 410 420 430 440 450 460 pF1KE6 FCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVM ::::: :::::::::::::::::.:::::::::::::::::::::::::::: ::::::: NP_002 FCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVM 420 430 440 450 460 470 470 480 490 500 510 520 pF1KE6 MPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFD ::::::::::::::::.::: ::::::::::::::::::::::::::::.:::::::::: NP_002 MPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFD 480 490 500 510 520 530 530 540 550 560 570 580 pF1KE6 VQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCI .:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: NP_002 AQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCI 540 550 560 570 580 590 590 600 610 620 pF1KE6 ARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD ::::::::::::::::::::::::::::::::::::::::: ::: NP_002 ARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 600 610 620 630 >>NP_001123478 (OMIM: 139259) eukaryotic peptide chain r (636 aa) initn: 3247 init1: 3089 opt: 3380 Z-score: 2953.8 bits: 556.7 E(85289): 8.7e-158 Smith-Waterman score: 3634; 88.0% identity (93.9% similar) in 627 aa overlap (3-628:19-636) 10 20 30 40 pF1KE6 MDSGSSSSDSAPDCWDQVDMESTGSAPSGDGVS-SAVAEAQREP :::::::::::::::.:::. : .: : : : .:.:::::: NP_001 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 LSSAFSRKLNVNAKPFVPNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKR ::.::::.:::::::::::::::::::::::::. :: :::...:.. ::: : NP_001 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPP-PAGGAANNH---GAGSGAG-- 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 MGRGAPVEPSREEPLVSLEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGG ::.:::: :.:: . :::::::.::::::. ::::.::. ::::::..:.::::::: NP_001 -GRAAPVESSQEEQSLC-EGSNSAVSMELSEPI-ENGETEMSPEESWEHKEEISEAEPGG 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE6 GSSGDSGPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQI :: ::. :::::..:::::.::: : :::..: ::::::::::::::::::::::::::: NP_001 GSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQI 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE6 MFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHF :.::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: NP_001 MYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE6 TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH 300 310 320 330 340 350 350 360 370 380 390 400 pF1KE6 LIVLINKMDDHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSD :::::::::: ::::: :::::::::::::::::::.:::::::::::::::::.::::: NP_001 LIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSD 360 370 380 390 400 410 410 420 430 440 450 460 pF1KE6 FCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVM ::::: :::::::::::::::::.:::::::::::::::::::::::::::: ::::::: NP_001 FCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVM 420 430 440 450 460 470 470 480 490 500 510 520 pF1KE6 MPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFD ::::::::::::::::.::: ::::::::::::::::::::::::::::.:::::::::: NP_001 MPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFD 480 490 500 510 520 530 530 540 550 560 570 580 pF1KE6 VQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCI .:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: NP_001 AQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCI 540 550 560 570 580 590 590 600 610 620 pF1KE6 ARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD ::::::::::::::::::::::::::::::::::::::::: ::: NP_001 ARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 600 610 620 630 >>NP_001123479 (OMIM: 139259) eukaryotic peptide chain r (499 aa) initn: 3132 init1: 3132 opt: 3132 Z-score: 2739.2 bits: 516.7 E(85289): 7.7e-146 Smith-Waterman score: 3132; 93.4% identity (97.4% similar) in 499 aa overlap (130-628:1-499) 100 110 120 130 140 150 pF1KE6 QGKRMGRGAPVEPSREEPLVSLEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEA ::::::.:::::.::. ::::::..:.::: NP_001 MELSEPIVENGETEMSPEESWEHKEEISEA 10 20 30 160 170 180 190 200 210 pF1KE6 EPGGGSSGDSGPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTI :::::: ::. :::::..:::::.::: : :::..: ::::::::::::::::::::::: NP_001 EPGGGSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTI 40 50 60 70 80 90 220 230 240 250 260 270 pF1KE6 GGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE 100 110 120 130 140 150 280 290 300 310 320 330 pF1KE6 RKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA 160 170 180 190 200 210 340 350 360 370 380 390 pF1KE6 GVKHLIVLINKMDDHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIK :::::::::::::: ::::: :::::::::::::::::::.:::::::::::::::::.: NP_001 GVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLK 220 230 240 250 260 270 400 410 420 430 440 450 pF1KE6 EQSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQ ::::::::: :::::::::::::::::.:::::::::::::::::::::::::::: ::: NP_001 EQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQ 280 290 300 310 320 330 460 470 480 490 500 510 pF1KE6 QLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSG ::::::::::::::::::::.::: ::::::::::::::::::::::::::::.:::::: NP_001 QLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSG 340 350 360 370 380 390 520 530 540 550 560 570 pF1KE6 RTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQD ::::.:::::::::::::::::::::::::::::::::: :::::::::::::::::::: NP_001 RTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQD 400 410 420 430 440 450 580 590 600 610 620 pF1KE6 QVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD ::::::::::::::::::::::::::::::::::::::::::::: ::: NP_001 QVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 460 470 480 490 >>NP_001138630 (OMIM: 612450) HBS1-like protein isoform (642 aa) initn: 899 init1: 635 opt: 1175 Z-score: 1032.2 bits: 201.2 E(85289): 9.3e-51 Smith-Waterman score: 1179; 37.9% identity (67.9% similar) in 546 aa overlap (103-623:98-640) 80 90 100 110 120 pF1KE6 LRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEP--SREE----PLVS-LEGSN ....: ::. :: : : :. . :. NP_001 FDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SAVTMELSEPVV---ENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPE--ESGQEMM . :: . : : :::. . ... .. .. .: ...::. ....:. NP_001 KKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQS 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 EEKEEIRKS----KSVIVPSGAPK----KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDK ..:: ... : . : :. .:.: ::::::::::. :....: : ..: NP_001 STPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINK 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE6 RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHK ::..:::.:.:. .. .. .:.:: . :::..: :..:: . ::: : .:..:::::: NP_001 RTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHK 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE6 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD .:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .:::: NP_001 DFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD 310 320 330 340 350 360 360 370 380 390 400 pF1KE6 DHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANI---KEQSDFCPWYT . :::. ::..: :: :::..::. ..:. :.: :::.: :. ...:.. :: NP_001 Q--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYK 370 380 390 400 410 420 410 420 430 440 450 460 pF1KE6 GLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGT--VVLGKLESGSIFKGQQLVMMPNK :: .. .:.. .:::: :.:: . : .::.:. . ::.:.: : :..:. :: . NP_001 GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPN 430 440 450 460 470 480 470 480 490 500 510 520 pF1KE6 HNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIV .. : :: : .:..: :..... : :.. .: : :.: :. .. : ..:. NP_001 ETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARIL 490 500 510 520 530 540 530 540 550 560 570 580 pF1KE6 IIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLR :.. . : :. ..:: .: : . : :::...:..:: .: .:.:. . : ...:. NP_001 IFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQ 550 560 570 580 590 600 590 600 610 620 pF1KE6 TAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD : : :: .::: ..::: :: :.::: : : .. NP_001 TQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 610 620 630 640 >>NP_006611 (OMIM: 612450) HBS1-like protein isoform 1 [ (684 aa) initn: 899 init1: 635 opt: 1175 Z-score: 1031.8 bits: 201.2 E(85289): 9.8e-51 Smith-Waterman score: 1179; 37.9% identity (67.9% similar) in 546 aa overlap (103-623:140-682) 80 90 100 110 120 pF1KE6 LRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEP--SREE----PLVS-LEGSN ....: ::. :: : : :. . :. NP_006 FDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSG 110 120 130 140 150 160 130 140 150 160 170 180 pF1KE6 SAVTMELSEPVV---ENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPE--ESGQEMM . :: . : : :::. . ... .. .. .: ...::. ....:. NP_006 KKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQS 170 180 190 200 210 220 190 200 210 220 230 pF1KE6 EEKEEIRKS----KSVIVPSGAPK----KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDK ..:: ... : . : :. .:.: ::::::::::. :....: : ..: NP_006 STPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINK 230 240 250 260 270 280 240 250 260 270 280 290 pF1KE6 RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHK ::..:::.:.:. .. .. .:.:: . :::..: :..:: . ::: : .:..:::::: NP_006 RTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHK 290 300 310 320 330 340 300 310 320 330 340 350 pF1KE6 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD .:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .:::: NP_006 DFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD 350 360 370 380 390 400 360 370 380 390 400 pF1KE6 DHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANI---KEQSDFCPWYT . :::. ::..: :: :::..::. ..:. :.: :::.: :. ...:.. :: NP_006 Q--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYK 410 420 430 440 450 460 410 420 430 440 450 460 pF1KE6 GLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGT--VVLGKLESGSIFKGQQLVMMPNK :: .. .:.. .:::: :.:: . : .::.:. . ::.:.: : :..:. :: . NP_006 GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPN 470 480 490 500 510 520 470 480 490 500 510 520 pF1KE6 HNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIV .. : :: : .:..: :..... : :.. .: : :.: :. .. : ..:. NP_006 ETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARIL 530 540 550 560 570 580 530 540 550 560 570 580 pF1KE6 IIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLR :.. . : :. ..:: .: : . : :::...:..:: .: .:.:. . : ...:. NP_006 IFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQ 590 600 610 620 630 640 590 600 610 620 pF1KE6 TAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD : : :: .::: ..::: :: :.::: : : .. NP_006 TQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 650 660 670 680 >>NP_001393 (OMIM: 130590) elongation factor 1-alpha 1 [ (462 aa) initn: 855 init1: 590 opt: 691 Z-score: 612.6 bits: 123.1 E(85289): 2.2e-27 Smith-Waterman score: 1029; 37.5% identity (66.7% similar) in 445 aa overlap (200-627:4-444) 170 180 190 200 210 220 pF1KE6 GPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGM .: :.:.: :::::.:::: :.... : NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG 10 20 30 230 240 250 260 270 280 pF1KE6 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAP .::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: . . ::.::: NP_001 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAP 40 50 60 70 80 90 290 300 310 320 330 340 pF1KE6 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN ::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .: NP_001 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN 100 110 120 130 140 150 350 360 370 380 390 400 pF1KE6 KMDDHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWY- :::. .: .:::: ... ..::.:..: . :.: :: .: :. : : ::. NP_001 KMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDT-VAFVPISGWNGDNMLEPSANMPWFK 160 170 180 190 200 210 410 420 430 440 450 pF1KE6 -----------TGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSI .: .. :: . .: : :.:::. : :: .::: .:..:.: . NP_001 GWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 220 230 240 250 260 270 460 470 480 490 500 510 pF1KE6 FKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN- :. ... : . ..:: .. . . ::.:. . .:.. ... : . : .: NP_001 KPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKND 280 290 300 310 320 330 520 530 540 550 560 570 pF1KE6 --LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTR . .: : .:..:..: . : :: :: :: ... : .:..::.: . NP_001 PPMEAAG--FTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDG 340 350 360 370 380 390 580 590 600 610 620 pF1KE6 PRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD :.:.:. .. :. . . .:.:.:.:.: .:::..:: .:.:.: :.: :..: NP_001 PKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVG-VIKAVDKKAAGAG 400 410 420 430 440 NP_001 KVTKSAQKAQKAK 450 460 >>XP_011533816 (OMIM: 130590) PREDICTED: elongation fact (462 aa) initn: 855 init1: 590 opt: 691 Z-score: 612.6 bits: 123.1 E(85289): 2.2e-27 Smith-Waterman score: 1029; 37.5% identity (66.7% similar) in 445 aa overlap (200-627:4-444) 170 180 190 200 210 220 pF1KE6 GPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGM .: :.:.: :::::.:::: :.... : XP_011 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG 10 20 30 230 240 250 260 270 280 pF1KE6 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAP .::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: . . ::.::: XP_011 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAP 40 50 60 70 80 90 290 300 310 320 330 340 pF1KE6 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN ::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .: XP_011 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN 100 110 120 130 140 150 350 360 370 380 390 400 pF1KE6 KMDDHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWY- :::. .: .:::: ... ..::.:..: . :.: :: .: :. : : ::. XP_011 KMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDT-VAFVPISGWNGDNMLEPSANMPWFK 160 170 180 190 200 210 410 420 430 440 450 pF1KE6 -----------TGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSI .: .. :: . .: : :.:::. : :: .::: .:..:.: . XP_011 GWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 220 230 240 250 260 270 460 470 480 490 500 510 pF1KE6 FKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN- :. ... : . ..:: .. . . ::.:. . .:.. ... : . : .: XP_011 KPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKND 280 290 300 310 320 330 520 530 540 550 560 570 pF1KE6 --LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTR . .: : .:..:..: . : :: :: :: ... : .:..::.: . XP_011 PPMEAAG--FTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDG 340 350 360 370 380 390 580 590 600 610 620 pF1KE6 PRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD :.:.:. .. :. . . .:.:.:.:.: .:::..:: .:.:.: :.: :..: XP_011 PKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVG-VIKAVDKKAAGAG 400 410 420 430 440 XP_011 KVTKSAQKAQKAK 450 460 >>NP_001949 (OMIM: 602959,616393,616409) elongation fact (463 aa) initn: 833 init1: 587 opt: 687 Z-score: 609.1 bits: 122.4 E(85289): 3.4e-27 Smith-Waterman score: 1012; 36.8% identity (67.3% similar) in 443 aa overlap (200-627:4-444) 170 180 190 200 210 220 pF1KE6 GPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGM .: :.:.: :::::.:::: :.... : NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG 10 20 30 230 240 250 260 270 280 pF1KE6 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAP .::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: . ..::.::: NP_001 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAP 40 50 60 70 80 90 290 300 310 320 330 340 pF1KE6 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN ::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .: NP_001 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN 100 110 120 130 140 150 350 360 370 380 390 400 pF1KE6 KMDDHTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWY- :::. .: .::.: ... ..::.:..: . :.: :: : :. : : ::. NP_001 KMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPAT-VPFVPISGWHGDNMLEPSPNMPWFK 160 170 180 190 200 210 410 420 430 440 450 pF1KE6 -----------TGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSI .:. .. ::.. .: : :.:::. : :: .::: .:..:.: . NP_001 GWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIL 220 230 240 250 260 270 460 470 480 490 500 510 pF1KE6 FKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDP-SN :. ... : . ..:: .. . . ::.:. . .:.. ..: : . : :. NP_001 RPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD 280 290 300 310 320 330 520 530 540 550 560 570 pF1KE6 LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPR . . : :..:..: . : ::. :. :: ... : .:..::.: . :. NP_001 PPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPK 340 350 360 370 380 390 580 590 600 610 620 pF1KE6 FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVQEKD .:. .. :... . .:.:.:...: .:::..:: .:.:.: :.: :..: NP_001 SLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVG-VIKNVEKKSGGAGKV 400 410 420 430 440 450 NP_001 TKSAQKAQKAGK 460 >>XP_016879108 (OMIM: 602389,610678) PREDICTED: elongati (455 aa) initn: 430 init1: 147 opt: 264 Z-score: 240.6 bits: 54.2 E(85289): 1.2e-06 Smith-Waterman score: 388; 28.0% identity (54.0% similar) in 339 aa overlap (201-529:58-362) 180 190 200 210 220 230 pF1KE6 PPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMV : :::: ::::: ::.:. . : . . XP_016 QGLLRLLKAPALPLLCRGLAVEAKKTYVRDKPHVNVGTIGHVDHGKTTLTAAITKILAEG 30 40 50 60 70 80 240 250 260 270 280 290 pF1KE6 DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPG ..:::. .:. ::: .: :...... . : .:.. : :: XP_016 GGAKFKKYEE---------------IDNAPEERARGITINAAHVEYSTAARHYAHTDCPG 90 100 110 120 130 300 310 320 330 340 350 pF1KE6 HKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINK : ..: ::: :.. : .::..: : . ::::: .::. ::.:..: .:: XP_016 HADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLARQIGVEHVVVYVNK 140 150 160 170 180 360 370 380 390 400 pF1KE6 MDDHTVNWSIERYE-ECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYT : . .: : : .: :. : :.. .. : ..:. . : XP_016 ADAVQDSEMVELVELEIRELLTEF----GYKGEET----PV--IVGSALCALEGRDP-EL 190 200 210 220 230 410 420 430 440 450 460 pF1KE6 GLPFIPYLDN-----LPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLV :: . : . .: :... :. ::. :. :::: : :: : . ::.. XP_016 GLKSVQKLLDAVDTYIPVPARDLEKPFLLPVEAVYSVPGRGTVVTGTLERGILKKGDECE 240 250 260 270 280 290 470 480 490 500 510 520 pF1KE6 MMPNKHNVE--VLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGR .. ...:.. : :: . . :.:: ..:...:.. :... :... . . XP_016 LLGHSKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVMVKPGSI-KPHQ 300 310 320 330 340 350 530 540 550 560 570 580 pF1KE6 TFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQ ..:. :. XP_016 KVEAQVYILSKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPEKELAMPGEDLKFNLIL 360 370 380 390 400 410 628 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:19:20 2016 done: Tue Nov 8 16:19:21 2016 Total Scan time: 10.250 Total Display time: 0.100 Function used was FASTA [36.3.4 Apr, 2011]