FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1814, 329 aa 1>>>pF1KE1814 329 - 329 aa - 329 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5153+/-0.000713; mu= 11.4038+/- 0.043 mean_var=97.2141+/-19.223, 0's: 0 Z-trim(112.2): 13 B-trim: 0 in 0/51 Lambda= 0.130080 statistics sampled from 13031 (13041) to 13031 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.757), E-opt: 0.2 (0.401), width: 16 Scan time: 2.800 The best scores are: opt bits E(32554) CCDS14294.1 FTSJ1 gene_id:24140|Hs108|chrX ( 329) 2264 434.5 5.5e-122 CCDS14295.1 FTSJ1 gene_id:24140|Hs108|chrX ( 327) 2232 428.5 3.5e-120 CCDS75972.1 FTSJ1 gene_id:24140|Hs108|chrX ( 192) 1339 260.8 6.3e-70 CCDS11644.1 FTSJ3 gene_id:117246|Hs108|chr17 ( 847) 539 111.0 3.5e-24 CCDS5328.1 MRM2 gene_id:29960|Hs108|chr7 ( 246) 397 84.1 1.3e-16 >>CCDS14294.1 FTSJ1 gene_id:24140|Hs108|chrX (329 aa) initn: 2264 init1: 2264 opt: 2264 Z-score: 2303.5 bits: 434.5 E(32554): 5.5e-122 Smith-Waterman score: 2264; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329) 10 20 30 40 50 60 pF1KE1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 QKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 QKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 VTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPDFNQLDGPTRIIVPFVTCGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 KPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPDFNQLDGPTRIIVPFVTCGD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAKEIRPQDCPISRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAKEIRPQDCPISRV 250 260 270 280 290 300 310 320 pF1KE1 DTFPQPLAAPQCHTLLAPEMEDNEMSCSP ::::::::::::::::::::::::::::: CCDS14 DTFPQPLAAPQCHTLLAPEMEDNEMSCSP 310 320 >>CCDS14295.1 FTSJ1 gene_id:24140|Hs108|chrX (327 aa) initn: 1500 init1: 1475 opt: 2232 Z-score: 2271.1 bits: 428.5 E(32554): 3.5e-120 Smith-Waterman score: 2232; 99.4% identity (99.4% similar) in 329 aa overlap (1-329:1-327) 10 20 30 40 50 60 pF1KE1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 QKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 QKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 VTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPDFNQLDGPTRIIVPFVTCGD :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS14 KPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSY--DFNQLDGPTRIIVPFVTCGD 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 LSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAKEIRPQDCPISRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAKEIRPQDCPISRV 240 250 260 270 280 290 310 320 pF1KE1 DTFPQPLAAPQCHTLLAPEMEDNEMSCSP ::::::::::::::::::::::::::::: CCDS14 DTFPQPLAAPQCHTLLAPEMEDNEMSCSP 300 310 320 >>CCDS75972.1 FTSJ1 gene_id:24140|Hs108|chrX (192 aa) initn: 1339 init1: 1339 opt: 1339 Z-score: 1368.9 bits: 260.8 E(32554): 6.3e-70 Smith-Waterman score: 1339; 100.0% identity (100.0% similar) in 191 aa overlap (139-329:2-192) 110 120 130 140 150 160 pF1KE1 PADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYS :::::::::::::::::::::::::::::: CCDS75 MALNIATHVLKPGGCFVAKIFRGRDVTLLYS 10 20 30 170 180 190 200 210 220 pF1KE1 QLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPDFNQLDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPDFNQLDGP 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE1 TRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 TRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAK 100 110 120 130 140 150 290 300 310 320 pF1KE1 EIRPQDCPISRVDTFPQPLAAPQCHTLLAPEMEDNEMSCSP ::::::::::::::::::::::::::::::::::::::::: CCDS75 EIRPQDCPISRVDTFPQPLAAPQCHTLLAPEMEDNEMSCSP 160 170 180 190 >>CCDS11644.1 FTSJ3 gene_id:117246|Hs108|chr17 (847 aa) initn: 552 init1: 305 opt: 539 Z-score: 547.7 bits: 111.0 E(32554): 3.5e-24 Smith-Waterman score: 539; 39.0% identity (68.2% similar) in 236 aa overlap (2-237:5-232) 10 20 30 40 50 pF1KE1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQ :...:..:: .:.::::.:.:.::::::.::...::..: . .:::::::.: : CCDS11 MGKKGKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQ 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 VLSQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDG : .. . :. .:.::: . :::.:: .: ::: . . ...: .:.:. :: CCDS11 VAAKFM--PVSSLIVGVDLVPIKPLPNVVTLQQDITTERCRQALRKELKTWKVDVVLNDG 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 APDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSV ::.: . : : ::.: : :: .: : :: :..:.::.:: : .: .: : CCDS11 APNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRV 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 LCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPDFNQLDGPTRIIVPFVT .::..::. : : :.::::. :. ... ..: .. :.... .. .. .:: CCDS11 QATKPQASRHESAEIFVVCQGFLAPD----KVDSKFFDPKF--AFKEVEVQAKTVTELVT 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 CGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAKEIRPQDCPI CCDS11 KKKPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDDEELAQHPATTEDIRV 240 250 260 270 280 290 >>CCDS5328.1 MRM2 gene_id:29960|Hs108|chr7 (246 aa) initn: 363 init1: 178 opt: 397 Z-score: 411.8 bits: 84.1 E(32554): 1.3e-16 Smith-Waterman score: 397; 33.5% identity (65.6% similar) in 209 aa overlap (5-206:36-244) 10 20 30 pF1KE1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDK .. :: . . :: ...: :::::::.... CCDS53 KLVCVSFQRQGFHTVGSRCKNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNE 10 20 30 40 50 60 40 50 60 70 80 pF1KE1 EFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGS------GHVVAVDLQAMAPLPGVVQI . :... :..: ::::.:::: ::... :. : :..::: . :: :.. . CCDS53 RHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL 70 80 90 100 110 120 90 100 110 120 130 140 pF1KE1 -QGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVL .:.:. :...:.. . : ::... : ::..::..:.:. .: :. :... .: CCDS53 CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDIL 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE1 KPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIP .::: :. : . : . : .: :..: ::..::. : :.. . : .: . CCDS53 QPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLATQYHGRKGTVK 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE1 DLSKPLLDHSYDPDFNQLDGPTRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQ CCDS53 Q 329 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:48:59 2016 done: Sun Nov 6 12:49:00 2016 Total Scan time: 2.800 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]