Result of FASTA (omim) for
pFN21AE5265
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5265, 190 aa
1>>>pF1KE5265 190 - 190 aa - 190 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8297+/-0.000447; mu= 15.4557+/- 0.028
mean_var=62.3591+/-12.726, 0's: 0 Z-trim(109.7): 155 B-trim: 326 in 1/50
Lambda= 0.162414
statistics sampled from 17711 (17868) to 17711 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.579), E-opt: 0.2 (0.209), width: 16
Scan time: 5.370
The best scores are: opt bits E(85289)
NP_071359 (OMIM: 300678) dual specificity protein ( 190) 1236 298.3 5e-81
XP_006724211 (OMIM: 611446) PREDICTED: dual specif ( 188) 902 220.0 1.8e-57
NP_689724 (OMIM: 611446) dual specificity protein ( 188) 902 220.0 1.8e-57
XP_011528223 (OMIM: 611446) PREDICTED: dual specif ( 188) 902 220.0 1.8e-57
XP_016884117 (OMIM: 611446) PREDICTED: dual specif ( 188) 902 220.0 1.8e-57
NP_001291723 (OMIM: 611446) dual specificity prote ( 188) 902 220.0 1.8e-57
XP_011528222 (OMIM: 611446) PREDICTED: dual specif ( 188) 902 220.0 1.8e-57
XP_016884116 (OMIM: 611446) PREDICTED: dual specif ( 188) 902 220.0 1.8e-57
XP_005261425 (OMIM: 611446) PREDICTED: dual specif ( 188) 902 220.0 1.8e-57
NP_001291724 (OMIM: 611446) dual specificity prote ( 188) 902 220.0 1.8e-57
XP_011522536 (OMIM: 606618) PREDICTED: dual specif ( 198) 613 152.3 4.5e-37
XP_005257034 (OMIM: 606618) PREDICTED: dual specif ( 198) 613 152.3 4.5e-37
NP_008957 (OMIM: 606618) dual specificity protein ( 198) 613 152.3 4.5e-37
NP_004408 (OMIM: 600714) dual specificity protein ( 367) 322 84.3 2.5e-16
XP_011542730 (OMIM: 602747) PREDICTED: dual specif ( 303) 296 78.2 1.4e-14
NP_476499 (OMIM: 602747) dual specificity protein ( 303) 296 78.2 1.4e-14
NP_001385 (OMIM: 602747) dual specificity protein ( 394) 296 78.3 1.8e-14
NP_009138 (OMIM: 608867) dual specificity protein ( 482) 290 76.9 5.5e-14
NP_004410 (OMIM: 603069) dual specificity protein ( 384) 284 75.4 1.2e-13
NP_004409 (OMIM: 603068) dual specificity protein ( 314) 282 74.9 1.4e-13
XP_016859035 (OMIM: 603068) PREDICTED: dual specif ( 342) 282 74.9 1.5e-13
XP_011519158 (OMIM: 607175) PREDICTED: dual specif ( 665) 282 75.1 2.6e-13
NP_085143 (OMIM: 607175) dual specificity protein ( 665) 282 75.1 2.6e-13
XP_006719218 (OMIM: 607175) PREDICTED: dual specif ( 665) 282 75.1 2.6e-13
XP_011519159 (OMIM: 607175) PREDICTED: dual specif ( 665) 282 75.1 2.6e-13
XP_011518235 (OMIM: 602038) PREDICTED: dual specif ( 625) 276 73.7 6.6e-13
NP_004411 (OMIM: 602038) dual specificity protein ( 625) 276 73.7 6.6e-13
XP_011518234 (OMIM: 602038) PREDICTED: dual specif ( 625) 276 73.7 6.6e-13
XP_005253545 (OMIM: 607175) PREDICTED: dual specif ( 517) 271 72.5 1.3e-12
XP_016875477 (OMIM: 607175) PREDICTED: dual specif ( 517) 271 72.5 1.3e-12
NP_542178 (OMIM: 616776) dual specificity protein ( 235) 267 71.3 1.3e-12
NP_543152 (OMIM: 611437) dual specificity protein ( 217) 265 70.8 1.7e-12
NP_001307407 (OMIM: 616776) dual specificity prote ( 232) 263 70.4 2.5e-12
XP_016883146 (OMIM: 616776) PREDICTED: dual specif ( 298) 252 67.9 1.8e-11
XP_016883145 (OMIM: 616776) PREDICTED: dual specif ( 311) 252 67.9 1.9e-11
XP_016883143 (OMIM: 616776) PREDICTED: dual specif ( 335) 252 67.9 2e-11
NP_001938 (OMIM: 602749) dual specificity protein ( 419) 252 68.0 2.4e-11
XP_011538156 (OMIM: 613191) PREDICTED: dual specif ( 198) 248 66.8 2.5e-11
XP_005269947 (OMIM: 613191) PREDICTED: dual specif ( 198) 248 66.8 2.5e-11
XP_011538157 (OMIM: 613191) PREDICTED: dual specif ( 198) 248 66.8 2.5e-11
NP_001307772 (OMIM: 613191) dual specificity prote ( 198) 248 66.8 2.5e-11
NP_057448 (OMIM: 613191) dual specificity protein ( 198) 248 66.8 2.5e-11
XP_011538158 (OMIM: 613191) PREDICTED: dual specif ( 198) 248 66.8 2.5e-11
XP_016871802 (OMIM: 613191) PREDICTED: dual specif ( 246) 248 66.9 3e-11
NP_001007273 (OMIM: 613191) dual specificity prote ( 248) 248 66.9 3e-11
NP_001007274 (OMIM: 613191) dual specificity prote ( 291) 248 66.9 3.4e-11
NP_001307771 (OMIM: 613191) dual specificity prote ( 291) 248 66.9 3.4e-11
XP_005269944 (OMIM: 613191) PREDICTED: dual specif ( 291) 248 66.9 3.4e-11
NP_001307408 (OMIM: 616776) dual specificity prote ( 295) 248 66.9 3.4e-11
XP_011538155 (OMIM: 613191) PREDICTED: dual specif ( 327) 248 66.9 3.7e-11
>>NP_071359 (OMIM: 300678) dual specificity protein phos (190 aa)
initn: 1236 init1: 1236 opt: 1236 Z-score: 1575.7 bits: 298.3 E(85289): 5e-81
Smith-Waterman score: 1236; 100.0% identity (100.0% similar) in 190 aa overlap (1-190:1-190)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
130 140 150 160 170 180
190
pF1KE5 EKDLRMMISM
::::::::::
NP_071 EKDLRMMISM
190
>>XP_006724211 (OMIM: 611446) PREDICTED: dual specificit (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
XP_006 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
XP_006 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
XP_006 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
XP_006 EKEVRLMIPL
180
>>NP_689724 (OMIM: 611446) dual specificity protein phos (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
NP_689 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
NP_689 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
NP_689 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
NP_689 EKEVRLMIPL
180
>>XP_011528223 (OMIM: 611446) PREDICTED: dual specificit (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
XP_011 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
XP_011 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
XP_011 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
XP_011 EKEVRLMIPL
180
>>XP_016884117 (OMIM: 611446) PREDICTED: dual specificit (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
XP_016 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
XP_016 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
XP_016 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
XP_016 EKEVRLMIPL
180
>>NP_001291723 (OMIM: 611446) dual specificity protein p (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
NP_001 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
NP_001 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
NP_001 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
NP_001 EKEVRLMIPL
180
>>XP_011528222 (OMIM: 611446) PREDICTED: dual specificit (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
XP_011 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
XP_011 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
XP_011 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
XP_011 EKEVRLMIPL
180
>>XP_016884116 (OMIM: 611446) PREDICTED: dual specificit (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
XP_016 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
XP_016 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
XP_016 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
XP_016 EKEVRLMIPL
180
>>XP_005261425 (OMIM: 611446) PREDICTED: dual specificit (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
XP_005 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
XP_005 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
XP_005 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
XP_005 EKEVRLMIPL
180
>>NP_001291724 (OMIM: 611446) dual specificity protein p (188 aa)
initn: 918 init1: 894 opt: 902 Z-score: 1152.8 bits: 220.0 E(85289): 1.8e-57
Smith-Waterman score: 902; 68.9% identity (91.1% similar) in 190 aa overlap (1-190:1-188)
10 20 30 40 50 60
pF1KE5 MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN
::: . .: . .:::. ..::::.::..:::::::.::.::::.:: ..:.::::::
NP_001 MTAPSCAFPVQ--FRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY
...: :::..:::.:. .::: :::::::: ::...:.:::::::: :::::::.:::::
NP_001 TLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY
:::::.:::::::::::: :::::::.:::::::.:::.::..:::.:..:::: :::::
NP_001 LMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIY
120 130 140 150 160 170
190
pF1KE5 EKDLRMMISM
::..:.:: .
NP_001 EKEVRLMIPL
180
190 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 23:00:20 2016 done: Mon Nov 7 23:00:21 2016
Total Scan time: 5.370 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]