FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6296, 183 aa 1>>>pF1KE6296 183 - 183 aa - 183 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5838+/-0.000812; mu= 10.7751+/- 0.049 mean_var=59.2536+/-11.646, 0's: 0 Z-trim(106.0): 17 B-trim: 0 in 0/50 Lambda= 0.166616 statistics sampled from 8747 (8756) to 8747 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.269), width: 16 Scan time: 1.570 The best scores are: opt bits E(32554) CCDS14227.1 FTHL17 gene_id:53940|Hs108|chrX ( 183) 1228 303.4 5.2e-83 CCDS41655.1 FTH1 gene_id:2495|Hs108|chr11 ( 183) 800 200.5 4.9e-52 CCDS4128.1 FTMT gene_id:94033|Hs108|chr5 ( 242) 752 189.0 1.9e-48 CCDS33070.1 FTL gene_id:2512|Hs108|chr19 ( 175) 576 146.6 7.6e-36 >>CCDS14227.1 FTHL17 gene_id:53940|Hs108|chrX (183 aa) initn: 1228 init1: 1228 opt: 1228 Z-score: 1603.7 bits: 303.4 E(32554): 5.2e-83 Smith-Waterman score: 1228; 100.0% identity (100.0% similar) in 183 aa overlap (1-183:1-183) 10 20 30 40 50 60 pF1KE6 MATAQPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MATAQPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DDKMEHAQKLMRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHLEKNVNQSLLDLYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DDKMEHAQKLMRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHLEKNVNQSLLDLYQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LAVEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKICSPEAGLAEYLFDKLTLGGRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LAVEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKICSPEAGLAEYLFDKLTLGGRV 130 140 150 160 170 180 pF1KE6 KET ::: CCDS14 KET >>CCDS41655.1 FTH1 gene_id:2495|Hs108|chr11 (183 aa) initn: 798 init1: 798 opt: 800 Z-score: 1047.7 bits: 200.5 E(32554): 4.9e-52 Smith-Waterman score: 800; 65.0% identity (88.5% similar) in 183 aa overlap (1-183:1-183) 10 20 30 40 50 60 pF1KE6 MATAQPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLS :.::. :::::.: . .:::: .:.::::.::.::::..::.::::::.:: .:::. : CCDS41 MTTASTSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DDKMEHAQKLMRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHLEKNVNQSLLDLYQ .. :::.:::.::: :::.: :.::.::.:. ::::: ::: :.:::::::::::.:.. CCDS41 HEEREHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LAVEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKICSPEAGLAEYLFDKLTLGGRV ::..:.::.:: :.:.:::.::::.::::: .:.::::. .::.::::::::: ::: CCDS41 LATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSD 130 140 150 160 170 180 pF1KE6 KET .:. CCDS41 NES >>CCDS4128.1 FTMT gene_id:94033|Hs108|chr5 (242 aa) initn: 765 init1: 749 opt: 752 Z-score: 983.3 bits: 189.0 E(32554): 1.9e-48 Smith-Waterman score: 752; 65.4% identity (85.5% similar) in 179 aa overlap (4-182:63-241) 10 20 30 pF1KE6 MATAQPSQVRQKYDTNCDAAINSHITLELYTSY : ::.:::.. . .:::: .:.::::.:: CCDS41 APGRPLDPRQIAPRRPLAAAASSRDPTGPAAGPSRVRQNFHPDSEAAINRQINLELYASY 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE6 LYLSMAFYFNRDDVALENFFRYFLRLSDDKMEHAQKLMRLQNLRGGHICLHDIRKPECQG .:::::.::.::::::.:: ::::. : .. :::.::::::: :::.: :.::.::: . CCDS41 VYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKPEQDD 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE6 WESGLVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLHEQVKTIKELGGYV ::::: ::: :. ::::::::::.:. :: .::::.:: :::..::.::::.::::: .: CCDS41 WESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHV 160 170 180 190 200 210 160 170 180 pF1KE6 SNLRKICSPEAGLAEYLFDKLTLGGRVKET :: :. .:.::::::::: :::.. :. CCDS41 HNLVKMGAPDAGLAEYLFDTHTLGNENKQN 220 230 240 >>CCDS33070.1 FTL gene_id:2512|Hs108|chr19 (175 aa) initn: 576 init1: 576 opt: 576 Z-score: 757.1 bits: 146.6 E(32554): 7.6e-36 Smith-Waterman score: 576; 49.4% identity (81.8% similar) in 170 aa overlap (7-176:3-172) 10 20 30 40 50 60 pF1KE6 MATAQPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLS ::.::.:.:. .::.:: ..: : .:: :::..:::.:::::::. ..: .:. CCDS33 MSSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELA 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 DDKMEHAQKLMRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHLEKNVNQSLLDLYQ ..: : ..:...:: :::. ..::.:: . : . ::..:. :::..::.::::. CCDS33 EEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 LAVEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKICSPEAGLAEYLFDKLTLGGRV :. . ::.:: :::.:.: :.:: ::..: ...::... .:::::.::::..::: CCDS33 LGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 120 130 140 150 160 170 pF1KE6 KET 183 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:52:51 2016 done: Tue Nov 8 11:52:52 2016 Total Scan time: 1.570 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]