Result of FASTA (ccds) for
pFN21AE2676
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2676, 1462 aa
1>>>pF1KE2676 1462 - 1462 aa - 1462 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1618+/-0.00103; mu= 14.1242+/- 0.062
mean_var=97.1984+/-19.136, 0's: 0 Z-trim(105.2): 26 B-trim: 0 in 0/54
Lambda= 0.130090
statistics sampled from 8309 (8322) to 8309 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.612), E-opt: 0.2 (0.256), width: 16
Scan time: 4.940
The best scores are: opt bits E(32554)
CCDS14214.1 POLA1 gene_id:5422|Hs108|chrX (1462) 9745 1840.3 0
CCDS83462.1 POLA1 gene_id:5422|Hs108|chrX (1468) 9719 1835.4 0
CCDS82381.1 POLD1 gene_id:5424|Hs108|chr19 (1133) 473 100.1 3.9e-20
CCDS12795.1 POLD1 gene_id:5424|Hs108|chr19 (1107) 448 95.4 9.8e-19
CCDS69177.1 REV3L gene_id:5980|Hs108|chr6 (3052) 445 95.0 3.7e-18
CCDS5091.2 REV3L gene_id:5980|Hs108|chr6 (3130) 445 95.0 3.8e-18
>>CCDS14214.1 POLA1 gene_id:5422|Hs108|chrX (1462 aa)
initn: 9745 init1: 9745 opt: 9745 Z-score: 9877.8 bits: 1840.3 E(32554): 0
Smith-Waterman score: 9745; 100.0% identity (100.0% similar) in 1462 aa overlap (1-1462:1-1462)
10 20 30 40 50 60
pF1KE2 MAPVHGDDSLSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDFTGVYEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAPVHGDDSLSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDFTGVYEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQITPPPVMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQITPPPVMI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 LKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQVESTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQVESTEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 EQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTVSYLGSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTVSYLGSF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 LPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYNQPGVVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYNQPGVVF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 LFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVYEEFDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVYEEFDEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 IATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDLKGETFSHVFGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDLKGETFSHVFGTN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 TSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVNVIKDVSPPPLVVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVNVIKDVSPPPLVVM
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 AFSMKTMQNAKNHQNEIIAMAALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIFPYAFKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AFSMKTMQNAKNHQNEIIAMAALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIFPYAFKE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 VIEKKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VIEKKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 KIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILKTER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILKTER
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 VVIPMENIQNMYSESSQLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVIPMENIQNMYSESSQLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 MGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 GGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGEQEQIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGEQEQIPE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTANSMYGCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTANSMYGCL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 GFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFK
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 LGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIV
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 RRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINKALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINKALT
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE2 KDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYAPEQLQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYAPEQLQK
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE2 QDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKDEENDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKDEENDAL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE2 LGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDNVFDGSGTDMEPSLYRCSNIDCKASPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDNVFDGSGTDMEPSLYRCSNIDCKASPL
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE2 TFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCRNRTRHLPLQFSRTGPLCPACMKATLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCRNRTRHLPLQFSRTGPLCPACMKATLQ
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE2 PEYSDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLKNTAEQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PEYSDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLKNTAEQF
1390 1400 1410 1420 1430 1440
1450 1460
pF1KE2 LSRSGYSEVNLSKLFAGCAVKS
::::::::::::::::::::::
CCDS14 LSRSGYSEVNLSKLFAGCAVKS
1450 1460
>>CCDS83462.1 POLA1 gene_id:5422|Hs108|chrX (1468 aa)
initn: 9686 init1: 9686 opt: 9719 Z-score: 9851.4 bits: 1835.4 E(32554): 0
Smith-Waterman score: 9719; 99.5% identity (99.6% similar) in 1468 aa overlap (1-1462:1-1468)
10 20 30 40 50
pF1KE2 MAPVHGDD------SLSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDF
:::::::: .:::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MAPVHGDDCEIGASALSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 TGVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 TGVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 ARNKDKRNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ARNKDKRNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQIT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 PPPVMILKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PPPVMILKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE2 VESTEEEQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VESTEEEQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE2 SYLGSFLPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SYLGSFLPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYN
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE2 QPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVY
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE2 EEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDLKGETFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 EEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDLKGETFS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE2 HVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVNVIKDVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 HVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVNVIKDVSP
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE2 PPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIF
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE2 PYAFKEVIEKKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PYAFKEVIEKKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVC
610 620 630 640 650 660
660 670 680 690 700 710
pF1KE2 KAPHWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KAPHWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQ
670 680 690 700 710 720
720 730 740 750 760 770
pF1KE2 ILKTERVVIPMENIQNMYSESSQLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 ILKTERVVIPMENIQNMYSESSQLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGN
730 740 750 760 770 780
780 790 800 810 820 830
pF1KE2 IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGR
790 800 810 820 830 840
840 850 860 870 880 890
pF1KE2 KKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGE
850 860 870 880 890 900
900 910 920 930 940 950
pF1KE2 QEQIPELPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QEQIPELPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTAN
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KE2 SMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTN
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060 1070
pF1KE2 LEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 LEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQEL
1030 1040 1050 1060 1070 1080
1080 1090 1100 1110 1120 1130
pF1KE2 KGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFE
1090 1100 1110 1120 1130 1140
1140 1150 1160 1170 1180 1190
pF1KE2 INKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 INKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYA
1150 1160 1170 1180 1190 1200
1200 1210 1220 1230 1240 1250
pF1KE2 PEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKD
1210 1220 1230 1240 1250 1260
1260 1270 1280 1290 1300 1310
pF1KE2 EENDALLGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDNVFDGSGTDMEPSLYRCSNID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 EENDALLGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDNVFDGSGTDMEPSLYRCSNID
1270 1280 1290 1300 1310 1320
1320 1330 1340 1350 1360 1370
pF1KE2 CKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCRNRTRHLPLQFSRTGPLCPAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 CKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCRNRTRHLPLQFSRTGPLCPAC
1330 1340 1350 1360 1370 1380
1380 1390 1400 1410 1420 1430
pF1KE2 MKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLK
1390 1400 1410 1420 1430 1440
1440 1450 1460
pF1KE2 NTAEQFLSRSGYSEVNLSKLFAGCAVKS
::::::::::::::::::::::::::::
CCDS83 NTAEQFLSRSGYSEVNLSKLFAGCAVKS
1450 1460
>>CCDS82381.1 POLD1 gene_id:5424|Hs108|chr19 (1133 aa)
initn: 488 init1: 113 opt: 473 Z-score: 475.0 bits: 100.1 E(32554): 3.9e-20
Smith-Waterman score: 748; 27.6% identity (57.0% similar) in 802 aa overlap (487-1235:254-1010)
460 470 480 490 500 510
pF1KE2 YSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQL---LNQPVSW
:... : : :::. . . :.. ..
CCDS82 RRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKEKATQ
230 240 250 260 270 280
520 530 540 550 560
pF1KE2 CKVEAMALKPDLVNVIKDVSPP--------PLVVMAFSMKTMQNA----KNHQNEIIAMA
:..:: .: :.:. :: :: :..:... . ... .: .
CCDS82 CQLEADVLWSDVVS-----HPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQIC
290 300 310 320 330
570 580 590 600 610 620
pF1KE2 ALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIFPYAFKEVIEKKNVKVEVAATERTLLGF
:..: . :.: .. . .. .: : : ..::. :. ::
CCDS82 -----SLGLRWGEPEPFLR--LALTLRP--CA-PIL--------GAKVQSYEKEEDLLQA
340 350 360 370 380
630 640 650 660 670
pF1KE2 FLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWSKIGRLKR--SNMPKLGGRSG-
. . .. .:::.:.:.:: .:.: :..: .. :. . .::. ::. . .:
CCDS82 WSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQ
390 400 410 420 430 440
680 690 700 710 720 730
pF1KE2 FGERNATCGRMICDVEISAKELI----RCKSYHLSELVQQILKTERVVIPMENIQNMYSE
:.:.. :. :... ... . .:: :. . ..: .. . : .. .
CCDS82 TGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNG
450 460 470 480 490 500
740 750 760 770 780 790
pF1KE2 SSQLLYLLE-HTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRSERNEFLLL
..: : . ::: . :... .: :: :.... ..: .: : :.. . ::
CCDS82 NDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLL
510 520 530 540 550 560
800 810 820 830 840
pF1KE2 HAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTN-KYKKGRKKAAYAGG----LVLDPK
. .... ..: . .. : :: : : . :: . ::. :.: :
CCDS82 RQAMHEGLLMP---VVKSE----GGED--YTGATVIEPLKGVRPQDRAGAAWELLALTPG
570 580 590 600 610
850 860 870 880 890
pF1KE2 VG-----FYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKV--TEDGEQEQIP--
: .:: : :::.::::::.. :.:.::. : .. :::. ::: . . :
CCDS82 RGCSPPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGT-AQKLGLTED-QFIRTPTG
620 630 640 650 660
900 910 920 930 940 950
pF1KE2 -ELPDPSLEMGILPREIRKLVERRKQVK-QLMKQQDLNPDLILQYDIRQKALKLTANSMY
:. :.. :.::. ...:. ::..: .: :. : .: : :: :::..:::.:
CCDS82 DEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVL--DGRQLALKVSANSVY
670 680 690 700 710 720
960 970 980 990 1000
pF1KE2 GCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQ-KMNLE--------VIYGDTDSIMI
: : . ... .. :: ::... .::..:. :...: :.::::::.:
CCDS82 GFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMC
730 740 750 760 770 780
1010 1020 1030 1040 1050 1060
pF1KE2 NTNSTNLEEVFKLGNKVKSEVNKLYKL-LEIDIDGVFKSLLLLKKKKYAALVVEPTSDGN
. ... :.. :: .. . :. . ...... :. ::..::.::.:. :..
CCDS82 RFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAH
790 800 810 820 830 840
1070 1080 1090 1100 1110 1120
pF1KE2 YVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGS
... :::. :::: : :. . . . ..: :.. . : . : .. ..: .
CCDS82 --DRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQ----DVISDLLCNR
850 860 870 880 890 900
1130 1140 1150 1160 1170 1180
pF1KE2 VPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQG-GRKVKAGDTVSYVICQDGSNL
. .::. :.: ::. .:: :.. ::..: . .. : . :: : ::: . ....
CCDS82 IDISQLVITKELTRAASDYAGKQA--HVELAERMRKRDPGSAPSLGDRVPYVIISAAKGV
910 920 930 940 950
1190 1200 1210 1220 1230 1240
pF1KE2 TASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDG---IDAVLIATWLGLDP
.: ... : . . .: ::::::: ::. . :: ::: : .:::.
CCDS82 AAYMKSEDP-LFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCK
960 970 980 990 1000 1010
1250 1260 1270 1280 1290 1300
pF1KE2 TQFRVHHYHKDEENDALLGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDNVFDGSGTDM
CCDS82 TVLTGKVGGLLAFAKRRNCCIGCRTVLSHQGAVCEFCQPRESELYQKEVSHLNALEERFS
1020 1030 1040 1050 1060 1070
>>CCDS12795.1 POLD1 gene_id:5424|Hs108|chr19 (1107 aa)
initn: 488 init1: 113 opt: 448 Z-score: 449.8 bits: 95.4 E(32554): 9.8e-19
Smith-Waterman score: 757; 27.3% identity (57.1% similar) in 792 aa overlap (487-1235:254-984)
460 470 480 490 500 510
pF1KE2 YSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQL---LNQPVSW
:... : : :::. . . :.. ..
CCDS12 RRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKEKATQ
230 240 250 260 270 280
520 530 540 550 560
pF1KE2 CKVEAMALKPDLVNVIKDVSPP--------PLVVMAFSMKTMQNA----KNHQNEIIAMA
:..:: .: :.:. :: :: :..:... . ... .: .
CCDS12 CQLEADVLWSDVVS-----HPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQIC
290 300 310 320 330
570 580 590 600 610 620
pF1KE2 ALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIFPYAFKEVIEKKNVKVEVAATERTLLGF
:..: . :.: .. . .. .: : : ..::. :. ::
CCDS12 -----SLGLRWGEPEPFLR--LALTLRP--CA-PIL--------GAKVQSYEKEEDLLQA
340 350 360 370 380
630 640 650 660 670
pF1KE2 FLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWSKIGRLKR--SNMPKLGGRSG-
. . .. .:::.:.:.:: .:.: :..: .. :. . .::. ::. . .:
CCDS12 WSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQ
390 400 410 420 430 440
680 690 700 710 720 730
pF1KE2 FGERNATCGRMICDVEISAKELI----RCKSYHLSELVQQILKTERVVIPMENIQNMYSE
:.:.. :. :... ... . .:: :. . ..: .. . : .. .
CCDS12 TGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNG
450 460 470 480 490 500
740 750 760 770 780 790
pF1KE2 SSQLLYLLE-HTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRSERNEFLLL
..: : . ::: . :... .: :: :.... ..: .: : :.. . ::
CCDS12 NDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLL
510 520 530 540 550 560
800 810 820 830 840 850
pF1KE2 HAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYAGGLVLDPKVGFYD
. .... ..: . .. : :: :.:. :..: :.::
CCDS12 RQAMHEGLLMP---VVKSE----GGED------------------YTGATVIEPLKGYYD
570 580 590
860 870 880 890 900
pF1KE2 KFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKV--TEDGEQEQIP---ELPDPSLEM
: :::.::::::.. :.:.::. : .. :::. ::: . . : :. :..
CCDS12 VPIATLDFSSLYPSIMMAHNLCYTTLLRPGT-AQKLGLTED-QFIRTPTGDEFVKTSVRK
600 610 620 630 640 650
910 920 930 940 950 960
pF1KE2 GILPREIRKLVERRKQVK-QLMKQQDLNPDLILQYDIRQKALKLTANSMYGCLGFSYSRF
:.::. ...:. ::..: .: :. : .: : :: :::..:::.:: : . ...
CCDS12 GLLPQILENLLSARKRAKAELAKETDPLRRQVL--DGRQLALKVSANSVYGFTGAQVGKL
660 670 680 690 700 710
970 980 990 1000 1010
pF1KE2 YAKPLAALVTYKGREILMHTKEMVQ-KMNLE--------VIYGDTDSIMINTNSTNLEEV
.. :: ::... .::..:. :...: :.::::::.: . ... :.
CCDS12 PCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEA
720 730 740 750 760 770
1020 1030 1040 1050 1060 1070
pF1KE2 FKLGNKVKSEVNKLYKL-LEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGL
. :: .. . :. . ...... :. ::..::.::.:. :.. ... :::
CCDS12 MALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAH--DRMDCKGL
780 790 800 810 820
1080 1090 1100 1110 1120 1130
pF1KE2 DIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINK
. :::: : :. . . . ..: :.. . : . : .. ..: . . .::. :.:
CCDS12 EAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQ----DVISDLLCNRIDISQLVITK
830 840 850 860 870 880
1140 1150 1160 1170 1180 1190
pF1KE2 ALTKDPQDYPDKKSLPHVHVALWINSQG-GRKVKAGDTVSYVICQDGSNLTASQRAYAPE
::. .:: :.. ::..: . .. : . :: : ::: . .....: ... :
CCDS12 ELTRAASDYAGKQA--HVELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDP-
890 900 910 920 930 940
1200 1210 1220 1230 1240 1250
pF1KE2 QLQKQDNLTIDTQYYLAQQIHPVVARICEPIDG---IDAVLIATWLGLDPTQFRVHHYHK
. . .: ::::::: ::. . :: ::: : .:::.
CCDS12 LFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGL
950 960 970 980 990 1000
1260 1270 1280 1290 1300 1310
pF1KE2 DEENDALLGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDNVFDGSGTDMEPSLYRCSNI
CCDS12 LAFAKRRNCCIGCRTVLSHQGAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQ
1010 1020 1030 1040 1050 1060
>>CCDS69177.1 REV3L gene_id:5980|Hs108|chr6 (3052 aa)
initn: 459 init1: 127 opt: 445 Z-score: 439.4 bits: 95.0 E(32554): 3.7e-18
Smith-Waterman score: 534; 21.4% identity (52.8% similar) in 1027 aa overlap (424-1392:2115-3048)
400 410 420 430 440 450
pF1KE2 MKIDLNTGKETGTPISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFE-IPDVPEKSEY
: . . :.: :. . .: .:..: :
CCDS69 PIKDGIQKSPCSEPQEPLVISPINTRARTGKCESLCFHSTPIIQRKLLERLPEAPGLS--
2090 2100 2110 2120 2130 2140
460 470 480 490 500 510
pF1KE2 LEVKYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVS
: : . : . .:. :.::..:. :.. . :. . :..:: .. ..
CCDS69 ---------P-LSTEPKTQKLSNKKGSNTDTLRRVLLT-QAKNQ-FAAVNTPQKETSQID
2150 2160 2170 2180 2190
520 530 540 550 560
pF1KE2 WCKVE-AMALKPDLVNV-----IKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHH
... ....: .. :. ..... :. . . .: .. . . :. . ::
CCDS69 GPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEP-DPEFDPICALF--
2200 2210 2220 2230 2240
570 580 590 600 610
pF1KE2 SFALDKAAPKPPFQ----SHFCVVSKPKDCIFP----YAFKEVIEKKNVKVEV--AATER
. ... .: : . . :..: : .: : .:.. . .:: :: :.
CCDS69 -YCISSDTPLPDTEKTELTGVIVIDKDKT-VFSQDIRYQTPLLIRSGITGLEVTYAADEK
2250 2260 2270 2280 2290 2300
620 630 640 650 660 670
pF1KE2 TLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQR-----INVCKAPHWSKIGRLKRSNMP
.:. . ... ::::..:..: :::: :..:. :.. : :
CCDS69 ALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMI--SRVPDDKIENRF
2310 2320 2330 2340 2350 2360
680 690 700 710 720
pF1KE2 KLGGRSGFGERNATCGRMICDVEISAKELIRCK----SYHLSELVQQILKTERVVIPMEN
. :. .: . . .. . .. ...: . .: . .. ..:. . .. ..
CCDS69 A-AERDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRV
2370 2380 2390 2400 2410 2420
730 740 750 760 770 780
pF1KE2 IQNMYSESSQLLY--LLEHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRS
... ......: ...: . .. ::.. .:... . ... . : . ..: : .
CCDS69 LSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQ
2430 2440 2450 2460 2470 2480
790 800 810 820 830 840
pF1KE2 ERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYAGGLVL
: : ..:. ::: .. .. :.. : :..
CCDS69 YRVESMMLRIAKPMNYIPVTPSVQQRSQMR---------------------APQCVPLIM
2490 2500 2510 2520
850 860 870 880 890
pF1KE2 DPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ------------RVASEAQKVTED-
.:. ::.. .:.:::.::::::. .: ::.: . . . .: :
CCDS69 EPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDL
2530 2540 2550 2560 2570 2580
900 910 920 930 940
pF1KE2 --GEQEQIPELPD------PSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI
...: :. ::.. :.::: ...... : .::: :: . : . :
CCDS69 LYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYKQDRALSRMLDA
2590 2600 2610 2620 2630 2640
950 960 970 980 990 1000
pF1KE2 RQKALKLTANSMYGCLGFSYS-RFYAKPLAALVTYKGREILMHTKEMV---QKMNLEVIY
:: .::: :: .: . ..: :. .. ...:.:: : .. ..: .: . .:.:
CCDS69 RQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVY
2650 2660 2670 2680 2690 2700
1010 1020 1030 1040 1050
pF1KE2 GDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLY-KLLEIDIDGVFKSLLLLKKKKYAALV
:::::... .... :. ::.:... :. : ... .. :. .: ::.:.. .
CCDS69 GDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYM
2710 2720 2730 2740 2750 2760
1060 1070 1080 1090 1100 1110
pF1KE2 VEPTSDGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEI
: .. . : . ::.. :::: : .. . . .. .. . : . .:.. ...
CCDS69 YETLDQKDPVF--DAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKL
2770 2780 2790 2800 2810
1120 1130 1140 1150 1160 1170
pF1KE2 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGR-KVKAGDTVSYV
:.:.. ...: . : . .: .: .... . . : . ..:. : ::
CCDS69 ----LEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYV
2820 2830 2840 2850 2860 2870
1180 1190 1200 1210 1220 1230
pF1KE2 ICQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATW
: .. : . : .. .. .: ... ::...:: : .::: : ::: . .:
CCDS69 IIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI-GID---VFSW
2880 2890 2900 2910 2920 2930
1240 1250 1260 1270 1280 1290
pF1KE2 LGLDPTQFRVHHYHKDEENDALLGGPAQLTDEEKYRDCERFKC-PCPTCGTENIYDNVFD
: :.:. .. ... : . .: . : ::.: :.. .
CCDS69 YHELP---RIHKATSSSRSE-----P----EGRKGTISQYFTTLHCPVC------DDLTQ
2940 2950 2960 2970
1300 1310 1320 1330 1340 1350
pF1KE2 GSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPT-CRNR
: ::. :...: .: :. ..::.. .. . ::.. : : .
CCDS69 -HGI--------CSK--CRSQPQHVAVILN----QEIRELERQQEQLVKICKNCTGCFD-
2980 2990 3000 3010
1360 1370 1380 1390 1400 1410
pF1KE2 TRHLPLQFSRTGPLCPACMKAT-LQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHEKD
::.: .. ::. .: . .. : : ::
CCDS69 -RHIPC----VSLNCPVLFKLSRVNRELSKAPYLRQLLDQF
3020 3030 3040 3050
1420 1430 1440 1450 1460
pF1KE2 KLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFAGCAVKS
>>CCDS5091.2 REV3L gene_id:5980|Hs108|chr6 (3130 aa)
initn: 459 init1: 127 opt: 445 Z-score: 439.2 bits: 95.0 E(32554): 3.8e-18
Smith-Waterman score: 534; 21.4% identity (52.8% similar) in 1027 aa overlap (424-1392:2193-3126)
400 410 420 430 440 450
pF1KE2 MKIDLNTGKETGTPISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFE-IPDVPEKSEY
: . . :.: :. . .: .:..: :
CCDS50 PIKDGIQKSPCSEPQEPLVISPINTRARTGKCESLCFHSTPIIQRKLLERLPEAPGLS--
2170 2180 2190 2200 2210 2220
460 470 480 490 500 510
pF1KE2 LEVKYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVS
: : . : . .:. :.::..:. :.. . :. . :..:: .. ..
CCDS50 ---------P-LSTEPKTQKLSNKKGSNTDTLRRVLLT-QAKNQ-FAAVNTPQKETSQID
2230 2240 2250 2260
520 530 540 550 560
pF1KE2 WCKVE-AMALKPDLVNV-----IKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHH
... ....: .. :. ..... :. . . .: .. . . :. . ::
CCDS50 GPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEP-DPEFDPICALF--
2270 2280 2290 2300 2310 2320
570 580 590 600 610
pF1KE2 SFALDKAAPKPPFQ----SHFCVVSKPKDCIFP----YAFKEVIEKKNVKVEV--AATER
. ... .: : . . :..: : .: : .:.. . .:: :: :.
CCDS50 -YCISSDTPLPDTEKTELTGVIVIDKDKT-VFSQDIRYQTPLLIRSGITGLEVTYAADEK
2330 2340 2350 2360 2370 2380
620 630 640 650 660 670
pF1KE2 TLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQR-----INVCKAPHWSKIGRLKRSNMP
.:. . ... ::::..:..: :::: :..:. :.. : :
CCDS50 ALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMI--SRVPDDKIENRF
2390 2400 2410 2420 2430 2440
680 690 700 710 720
pF1KE2 KLGGRSGFGERNATCGRMICDVEISAKELIRCK----SYHLSELVQQILKTERVVIPMEN
. :. .: . . .. . .. ...: . .: . .. ..:. . .. ..
CCDS50 A-AERDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRV
2450 2460 2470 2480 2490 2500
730 740 750 760 770 780
pF1KE2 IQNMYSESSQLLY--LLEHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRS
... ......: ...: . .. ::.. .:... . ... . : . ..: : .
CCDS50 LSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQ
2510 2520 2530 2540 2550 2560
790 800 810 820 830 840
pF1KE2 ERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYAGGLVL
: : ..:. ::: .. .. :.. : :..
CCDS50 YRVESMMLRIAKPMNYIPVTPSVQQRSQMR---------------------APQCVPLIM
2570 2580 2590
850 860 870 880 890
pF1KE2 DPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ------------RVASEAQKVTED-
.:. ::.. .:.:::.::::::. .: ::.: . . . .: :
CCDS50 EPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDL
2600 2610 2620 2630 2640 2650
900 910 920 930 940
pF1KE2 --GEQEQIPELPD------PSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI
...: :. ::.. :.::: ...... : .::: :: . : . :
CCDS50 LYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYKQDRALSRMLDA
2660 2670 2680 2690 2700 2710
950 960 970 980 990 1000
pF1KE2 RQKALKLTANSMYGCLGFSYS-RFYAKPLAALVTYKGREILMHTKEMV---QKMNLEVIY
:: .::: :: .: . ..: :. .. ...:.:: : .. ..: .: . .:.:
CCDS50 RQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVY
2720 2730 2740 2750 2760 2770
1010 1020 1030 1040 1050
pF1KE2 GDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLY-KLLEIDIDGVFKSLLLLKKKKYAALV
:::::... .... :. ::.:... :. : ... .. :. .: ::.:.. .
CCDS50 GDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYM
2780 2790 2800 2810 2820 2830
1060 1070 1080 1090 1100 1110
pF1KE2 VEPTSDGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEI
: .. . : . ::.. :::: : .. . . .. .. . : . .:.. ...
CCDS50 YETLDQKDPVF--DAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKL
2840 2850 2860 2870 2880 2890
1120 1130 1140 1150 1160 1170
pF1KE2 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGR-KVKAGDTVSYV
:.:.. ...: . : . .: .: .... . . : . ..:. : ::
CCDS50 ----LEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYV
2900 2910 2920 2930 2940 2950
1180 1190 1200 1210 1220 1230
pF1KE2 ICQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATW
: .. : . : .. .. .: ... ::...:: : .::: : ::: . .:
CCDS50 IIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI-GID---VFSW
2960 2970 2980 2990 3000
1240 1250 1260 1270 1280 1290
pF1KE2 LGLDPTQFRVHHYHKDEENDALLGGPAQLTDEEKYRDCERFKC-PCPTCGTENIYDNVFD
: :.:. .. ... : . .: . : ::.: :.. .
CCDS50 YHELP---RIHKATSSSRSE-----P----EGRKGTISQYFTTLHCPVC------DDLTQ
3010 3020 3030 3040 3050
1300 1310 1320 1330 1340 1350
pF1KE2 GSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPT-CRNR
: ::. :...: .: :. ..::.. .. . ::.. : : .
CCDS50 -HGI--------CSK--CRSQPQHVAVILN----QEIRELERQQEQLVKICKNCTGCFD-
3060 3070 3080 3090
1360 1370 1380 1390 1400 1410
pF1KE2 TRHLPLQFSRTGPLCPACMKAT-LQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHEKD
::.: .. ::. .: . .. : : ::
CCDS50 -RHIPC----VSLNCPVLFKLSRVNRELSKAPYLRQLLDQF
3100 3110 3120 3130
1420 1430 1440 1450 1460
pF1KE2 KLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFAGCAVKS
1462 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Jul 27 10:35:01 2017 done: Thu Jul 27 10:35:02 2017
Total Scan time: 4.940 Total Display time: 0.390
Function used was FASTA [36.3.4 Apr, 2011]