FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2593, 332 aa 1>>>pF1KE2593 332 - 332 aa - 332 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.5141+/-0.00109; mu= 0.0554+/- 0.066 mean_var=349.5626+/-69.701, 0's: 0 Z-trim(114.0): 40 B-trim: 15 in 1/52 Lambda= 0.068598 statistics sampled from 14574 (14606) to 14574 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.449), width: 16 Scan time: 3.060 The best scores are: opt bits E(32554) CCDS14131.1 FAM9A gene_id:171482|Hs108|chrX ( 332) 2116 222.7 3.3e-58 CCDS14132.1 FAM9B gene_id:171483|Hs108|chrX ( 186) 542 66.6 1.8e-11 >>CCDS14131.1 FAM9A gene_id:171482|Hs108|chrX (332 aa) initn: 2116 init1: 2116 opt: 2116 Z-score: 1158.4 bits: 222.7 E(32554): 3.3e-58 Smith-Waterman score: 2116; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332) 10 20 30 40 50 60 pF1KE2 MEPVGRKRSRKAAKAQLEAQVTAAQGATKEGSGIASNFPGQPTMEPVGRKRSRKAAKAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MEPVGRKRSRKAAKAQLEAQVTAAQGATKEGSGIASNFPGQPTMEPVGRKRSRKAAKAQL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 EAQVRAAPAKKHTGKDPVRDECEERNPFTETREEDVTDEHGEREPFAEKDEHTGIHTMKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EAQVRAAPAKKHTGKDPVRDECEERNPFTETREEDVTDEHGEREPFAEKDEHTGIHTMKL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 EHIAADIKKGLAAKREMIKIDKAAYRKTKNTIERALKKKQLKRQKRDYRHTRKLLNVLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EHIAADIKKGLAAKREMIKIDKAAYRKTKNTIERALKKKQLKRQKRDYRHTRKLLNVLKE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 YIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 EEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEEQIKAFQEKQKRWQQPTGVRSWRLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEEQIKAFQEKQKRWQQPTGVRSWRLRE 250 260 270 280 290 300 310 320 330 pF1KE2 MKPLLEQLLKAAKDTKDNYCIISSSEESELDN :::::::::::::::::::::::::::::::: CCDS14 MKPLLEQLLKAAKDTKDNYCIISSSEESELDN 310 320 330 >>CCDS14132.1 FAM9B gene_id:171483|Hs108|chrX (186 aa) initn: 549 init1: 322 opt: 542 Z-score: 319.5 bits: 66.6 E(32554): 1.8e-11 Smith-Waterman score: 584; 46.8% identity (57.7% similar) in 267 aa overlap (66-332:2-186) 40 50 60 70 80 90 pF1KE2 SNFPGQPTMEPVGRKRSRKAAKAQLEAQVRAAPAKKHTGKDPVRDECEERNPFTETREED :: .:::.::::::::::::: :::::::: CCDS14 MAAWGKKHAGKDPVRDECEERNRFTETREED 10 20 30 100 110 120 130 140 150 pF1KE2 VTDEHGEREPFAEKDEHTGIHTMKLEHIAADIKKGLAAKREMIKIDKAAYRKTKNTIERA ::::::::::::: ::::: .: : : : : :.:::. .:.::. :::: ..: CCDS14 VTDEHGEREPFAETDEHTGANTKKPEDTAED----LTAKRKRMKMDKTC-SKTKNKSKHA 40 50 60 70 80 160 170 180 190 200 210 pF1KE2 LKKKQLKRQKRDYRHTRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAE :.::::::::::: :. ::::::.:::...:: CCDS14 LRKKQLKRQKRDYIHSLKLLNVLEEYITDEQK---------------------------- 90 100 110 220 230 240 250 260 270 pF1KE2 VIVVEDEEEEEKEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEE :::::::::: : CCDS14 ------------------EEEEEEGEEE-------------------------------E 120 280 290 300 310 320 330 pF1KE2 QIKAFQEKQKRWQQPTGVRSWRLREMKPLLEQLLKAAKDTKDNYCIISSSEESELDN :. :::.::.::: .:: ::.::: : .:..:: .: .: . :.:.::::: CCDS14 LIRIFQEQQKKWQQYRSVRRERLKEMKLLRDQFVKALEDFEDLCDRVFSDEDSELDN 130 140 150 160 170 180 332 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:44:39 2016 done: Tue Nov 8 16:44:39 2016 Total Scan time: 3.060 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]