Result of FASTA (omim) for pFN21AE2213
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2213, 373 aa
  1>>>pF1KE2213 373 - 373 aa - 373 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8678+/-0.000412; mu= 18.3929+/- 0.025
 mean_var=55.7783+/-11.713, 0's: 0 Z-trim(111.1): 50  B-trim: 767 in 1/50
 Lambda= 0.171728
 statistics sampled from 19503 (19551) to 19503 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.229), width:  16
 Scan time:  7.170

The best scores are:                                      opt bits E(85289)
NP_001164509 (OMIM: 300015,402500) acetylserotonin ( 373) 2468 619.8 3.1e-177
NP_004034 (OMIM: 300015,402500) acetylserotonin O- ( 373) 2468 619.8 3.1e-177
NP_001164510 (OMIM: 300015,402500) acetylserotonin ( 298) 1238 315.0 1.4e-85
XP_016885573 (OMIM: 300162,400011) PREDICTED: N-ac ( 512)  510 134.8 4.4e-31
XP_016885408 (OMIM: 300162,400011) PREDICTED: N-ac ( 512)  510 134.8 4.4e-31
XP_011543940 (OMIM: 300162,400011) PREDICTED: N-ac ( 538)  510 134.8 4.6e-31
XP_011544487 (OMIM: 300162,400011) PREDICTED: N-ac ( 538)  510 134.8 4.6e-31
NP_001166944 (OMIM: 300162,400011) N-acetylseroton ( 563)  510 134.8 4.7e-31
NP_001166945 (OMIM: 300162,400011) N-acetylseroton ( 605)  510 134.8   5e-31
XP_005274840 (OMIM: 300162,400011) PREDICTED: N-ac ( 621)  510 134.8 5.1e-31
NP_004183 (OMIM: 300162,400011) N-acetylserotonin  ( 621)  510 134.8 5.1e-31
XP_005274491 (OMIM: 300162,400011) PREDICTED: N-ac ( 621)  510 134.8 5.1e-31
XP_016867166 (OMIM: 604368) PREDICTED: transmembra ( 559)  131 40.9  0.0087
XP_016867165 (OMIM: 604368) PREDICTED: transmembra ( 600)  131 40.9  0.0092


>>NP_001164509 (OMIM: 300015,402500) acetylserotonin O-m  (373 aa)
 initn: 2468 init1: 2468 opt: 2468  Z-score: 3302.8  bits: 619.8 E(85289): 3.1e-177
Smith-Waterman score: 2468; 99.7% identity (99.7% similar) in 373 aa overlap (1-373:1-373)

               10        20        30        40        50        60
pF1KE2 MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 ELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 ADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 PLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGAGALAKECMSLYPGCKITVFDIP
       ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLMCDLGGTWIKLETIILSKLSQGQKTKHRVFSLIGGAGALAKECMSLYPGCKITVFDIP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 EVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 CKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK
              310       320       330       340       350       360

              370   
pF1KE2 KTGAIYDAILARK
       :::::::::::::
NP_001 KTGAIYDAILARK
              370   

>>NP_004034 (OMIM: 300015,402500) acetylserotonin O-meth  (373 aa)
 initn: 2468 init1: 2468 opt: 2468  Z-score: 3302.8  bits: 619.8 E(85289): 3.1e-177
Smith-Waterman score: 2468; 99.7% identity (99.7% similar) in 373 aa overlap (1-373:1-373)

               10        20        30        40        50        60
pF1KE2 MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 ELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 ADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 PLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGAGALAKECMSLYPGCKITVFDIP
       ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PLMCDLGGTWIKLETIILSKLSQGQKTKHRVFSLIGGAGALAKECMSLYPGCKITVFDIP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 EVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 CKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK
              310       320       330       340       350       360

              370   
pF1KE2 KTGAIYDAILARK
       :::::::::::::
NP_004 KTGAIYDAILARK
              370   

>>NP_001164510 (OMIM: 300015,402500) acetylserotonin O-m  (298 aa)
 initn: 1238 init1: 1238 opt: 1238  Z-score: 1657.4  bits: 315.0 E(85289): 1.4e-85
Smith-Waterman score: 1823; 79.9% identity (79.9% similar) in 373 aa overlap (1-373:1-298)

               10        20        30        40        50        60
pF1KE2 MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 ELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 ADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 PLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGAGALAKECMSLYPGCKITVFDIP
       ::::::::                                                    
NP_001 PLMCDLGG----------------------------------------------------
                                                                   

              250       260       270       280       290       300
pF1KE2 EVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHT
                              :::::::::::::::::::::::::::::::::::::
NP_001 -----------------------DFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHT
                             190       200       210       220     

              310       320       330       340       350       360
pF1KE2 CKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK
         230       240       250       260       270       280     

              370   
pF1KE2 KTGAIYDAILARK
       :::::::::::::
NP_001 KTGAIYDAILARK
         290        

>>XP_016885573 (OMIM: 300162,400011) PREDICTED: N-acetyl  (512 aa)
 initn: 808 init1: 425 opt: 510  Z-score: 679.1  bits: 134.8 E(85289): 4.4e-31
Smith-Waterman score: 794; 40.3% identity (63.8% similar) in 367 aa overlap (10-373:178-509)

                                    10        20        30         
pF1KE2                      MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAE
                                     ::: .  .:::.:. :..::.: ::::: .
XP_016 DEKAEAGEAGQATAEAECHRTRETLPPFPTRLL-ELIEGFMLSKGLLTACKLKVFDLLKD
       150       160       170       180        190       200      

      40        50        60        70        80        90         
pF1KE2 APGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSP
         .:  .: .:. : ::: : : :::::... ::.   .:    : ::: .. ::.. . 
XP_016 E-APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQG----YSNTETANVYLASDGE
         210       220       230       240           250       260 

     100       110       120       130       140        150        
pF1KE2 TSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFT-AIYRSEGERLQFMQ
        :  ... . .  ..  . .:  :.::: ::. ...:  ::.::  : :.:   ::.::.
XP_016 YSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR
             270       280       290       300       310       320 

      160       170       180       190       200       210        
pF1KE2 ALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGA
       :.. . .... .: :::.:: :   ::.::                             .
XP_016 AMHGMTKLTACQVATAFNLSRFSSACDVGGC----------------------------T
             330       340       350                               

      220       230       240       250         260       270      
pF1KE2 GALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEE--QIDFQEGDFFKDPLPEADLY
       ::::.:    ::  ..::::.:...  :  ::.    .  :: :  ::::.:::: :.::
XP_016 GALARELAREYPRMQVTVFDLPDIIELAA-HFQPPGPQAVQIHFAAGDFFRDPLPSAELY
           360       370       380        390       400       410  

        280       290       300       310       320       330      
pF1KE2 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE
       .: :.:::: : :  .:: :. ..::::.:.:..:.::::..:    . . :::::::::
XP_016 VLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTE
            420       430       440       450       460       470  

        340       350       360       370      
pF1KE2 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK   
       :.::.  .:. ::   ::.. :  . :.. ::::: :   
XP_016 GKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
            480       490       500       510  

>>XP_016885408 (OMIM: 300162,400011) PREDICTED: N-acetyl  (512 aa)
 initn: 808 init1: 425 opt: 510  Z-score: 679.1  bits: 134.8 E(85289): 4.4e-31
Smith-Waterman score: 794; 40.3% identity (63.8% similar) in 367 aa overlap (10-373:178-509)

                                    10        20        30         
pF1KE2                      MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAE
                                     ::: .  .:::.:. :..::.: ::::: .
XP_016 DEKAEAGEAGQATAEAECHRTRETLPPFPTRLL-ELIEGFMLSKGLLTACKLKVFDLLKD
       150       160       170       180        190       200      

      40        50        60        70        80        90         
pF1KE2 APGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSP
         .:  .: .:. : ::: : : :::::... ::.   .:    : ::: .. ::.. . 
XP_016 E-APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQG----YSNTETANVYLASDGE
         210       220       230       240           250       260 

     100       110       120       130       140        150        
pF1KE2 TSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFT-AIYRSEGERLQFMQ
        :  ... . .  ..  . .:  :.::: ::. ...:  ::.::  : :.:   ::.::.
XP_016 YSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR
             270       280       290       300       310       320 

      160       170       180       190       200       210        
pF1KE2 ALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGA
       :.. . .... .: :::.:: :   ::.::                             .
XP_016 AMHGMTKLTACQVATAFNLSRFSSACDVGGC----------------------------T
             330       340       350                               

      220       230       240       250         260       270      
pF1KE2 GALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEE--QIDFQEGDFFKDPLPEADLY
       ::::.:    ::  ..::::.:...  :  ::.    .  :: :  ::::.:::: :.::
XP_016 GALARELAREYPRMQVTVFDLPDIIELAA-HFQPPGPQAVQIHFAAGDFFRDPLPSAELY
           360       370       380        390       400       410  

        280       290       300       310       320       330      
pF1KE2 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE
       .: :.:::: : :  .:: :. ..::::.:.:..:.::::..:    . . :::::::::
XP_016 VLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTE
            420       430       440       450       460       470  

        340       350       360       370      
pF1KE2 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK   
       :.::.  .:. ::   ::.. :  . :.. ::::: :   
XP_016 GKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
            480       490       500       510  

>>XP_011543940 (OMIM: 300162,400011) PREDICTED: N-acetyl  (538 aa)
 initn: 808 init1: 425 opt: 510  Z-score: 678.7  bits: 134.8 E(85289): 4.6e-31
Smith-Waterman score: 794; 40.3% identity (63.8% similar) in 367 aa overlap (10-373:204-535)

                                    10        20        30         
pF1KE2                      MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAE
                                     ::: .  .:::.:. :..::.: ::::: .
XP_011 DEKAEAGEAGQATAEAECHRTRETLPPFPTRLL-ELIEGFMLSKGLLTACKLKVFDLLKD
           180       190       200        210       220       230  

      40        50        60        70        80        90         
pF1KE2 APGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSP
         .:  .: .:. : ::: : : :::::... ::.   .:    : ::: .. ::.. . 
XP_011 E-APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQG----YSNTETANVYLASDGE
             240       250       260       270           280       

     100       110       120       130       140        150        
pF1KE2 TSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFT-AIYRSEGERLQFMQ
        :  ... . .  ..  . .:  :.::: ::. ...:  ::.::  : :.:   ::.::.
XP_011 YSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR
       290       300       310       320       330       340       

      160       170       180       190       200       210        
pF1KE2 ALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGA
       :.. . .... .: :::.:: :   ::.::                             .
XP_011 AMHGMTKLTACQVATAFNLSRFSSACDVGGC----------------------------T
       350       360       370                                     

      220       230       240       250         260       270      
pF1KE2 GALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEE--QIDFQEGDFFKDPLPEADLY
       ::::.:    ::  ..::::.:...  :  ::.    .  :: :  ::::.:::: :.::
XP_011 GALARELAREYPRMQVTVFDLPDIIELAA-HFQPPGPQAVQIHFAAGDFFRDPLPSAELY
     380       390       400        410       420       430        

        280       290       300       310       320       330      
pF1KE2 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE
       .: :.:::: : :  .:: :. ..::::.:.:..:.::::..:    . . :::::::::
XP_011 VLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTE
      440       450       460       470       480       490        

        340       350       360       370      
pF1KE2 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK   
       :.::.  .:. ::   ::.. :  . :.. ::::: :   
XP_011 GKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
      500       510       520       530        

>>XP_011544487 (OMIM: 300162,400011) PREDICTED: N-acetyl  (538 aa)
 initn: 808 init1: 425 opt: 510  Z-score: 678.7  bits: 134.8 E(85289): 4.6e-31
Smith-Waterman score: 794; 40.3% identity (63.8% similar) in 367 aa overlap (10-373:204-535)

                                    10        20        30         
pF1KE2                      MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAE
                                     ::: .  .:::.:. :..::.: ::::: .
XP_011 DEKAEAGEAGQATAEAECHRTRETLPPFPTRLL-ELIEGFMLSKGLLTACKLKVFDLLKD
           180       190       200        210       220       230  

      40        50        60        70        80        90         
pF1KE2 APGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSP
         .:  .: .:. : ::: : : :::::... ::.   .:    : ::: .. ::.. . 
XP_011 E-APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQG----YSNTETANVYLASDGE
             240       250       260       270           280       

     100       110       120       130       140        150        
pF1KE2 TSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFT-AIYRSEGERLQFMQ
        :  ... . .  ..  . .:  :.::: ::. ...:  ::.::  : :.:   ::.::.
XP_011 YSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR
       290       300       310       320       330       340       

      160       170       180       190       200       210        
pF1KE2 ALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGA
       :.. . .... .: :::.:: :   ::.::                             .
XP_011 AMHGMTKLTACQVATAFNLSRFSSACDVGGC----------------------------T
       350       360       370                                     

      220       230       240       250         260       270      
pF1KE2 GALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEE--QIDFQEGDFFKDPLPEADLY
       ::::.:    ::  ..::::.:...  :  ::.    .  :: :  ::::.:::: :.::
XP_011 GALARELAREYPRMQVTVFDLPDIIELAA-HFQPPGPQAVQIHFAAGDFFRDPLPSAELY
     380       390       400        410       420       430        

        280       290       300       310       320       330      
pF1KE2 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE
       .: :.:::: : :  .:: :. ..::::.:.:..:.::::..:    . . :::::::::
XP_011 VLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTE
      440       450       460       470       480       490        

        340       350       360       370      
pF1KE2 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK   
       :.::.  .:. ::   ::.. :  . :.. ::::: :   
XP_011 GKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
      500       510       520       530        

>>NP_001166944 (OMIM: 300162,400011) N-acetylserotonin O  (563 aa)
 initn: 808 init1: 425 opt: 510  Z-score: 678.4  bits: 134.8 E(85289): 4.7e-31
Smith-Waterman score: 794; 40.3% identity (63.8% similar) in 367 aa overlap (10-373:229-560)

                                    10        20        30         
pF1KE2                      MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAE
                                     ::: .  .:::.:. :..::.: ::::: .
NP_001 DEKAEAGEAGQATAEAECHRTRETLPPFPTRLL-ELIEGFMLSKGLLTACKLKVFDLLKD
      200       210       220       230        240       250       

      40        50        60        70        80        90         
pF1KE2 APGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSP
         .:  .: .:. : ::: : : :::::... ::.   .:    : ::: .. ::.. . 
NP_001 E-APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQG----YSNTETANVYLASDGE
        260       270       280       290           300       310  

     100       110       120       130       140        150        
pF1KE2 TSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFT-AIYRSEGERLQFMQ
        :  ... . .  ..  . .:  :.::: ::. ...:  ::.::  : :.:   ::.::.
NP_001 YSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR
            320       330       340       350       360       370  

      160       170       180       190       200       210        
pF1KE2 ALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGA
       :.. . .... .: :::.:: :   ::.::                             .
NP_001 AMHGMTKLTACQVATAFNLSRFSSACDVGGC----------------------------T
            380       390       400                                

      220       230       240       250         260       270      
pF1KE2 GALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEE--QIDFQEGDFFKDPLPEADLY
       ::::.:    ::  ..::::.:...  :  ::.    .  :: :  ::::.:::: :.::
NP_001 GALARELAREYPRMQVTVFDLPDIIELAA-HFQPPGPQAVQIHFAAGDFFRDPLPSAELY
          410       420       430        440       450       460   

        280       290       300       310       320       330      
pF1KE2 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE
       .: :.:::: : :  .:: :. ..::::.:.:..:.::::..:    . . :::::::::
NP_001 VLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTE
           470       480       490       500       510       520   

        340       350       360       370      
pF1KE2 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK   
       :.::.  .:. ::   ::.. :  . :.. ::::: :   
NP_001 GKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
           530       540       550       560   

>>NP_001166945 (OMIM: 300162,400011) N-acetylserotonin O  (605 aa)
 initn: 808 init1: 425 opt: 510  Z-score: 678.0  bits: 134.8 E(85289): 5e-31
Smith-Waterman score: 794; 40.3% identity (63.8% similar) in 367 aa overlap (10-373:271-602)

                                    10        20        30         
pF1KE2                      MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAE
                                     ::: .  .:::.:. :..::.: ::::: .
NP_001 DEKAEAGEAGQATAEAECHRTRETLPPFPTRLL-ELIEGFMLSKGLLTACKLKVFDLLKD
              250       260       270        280       290         

      40        50        60        70        80        90         
pF1KE2 APGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSP
         .:  .: .:. : ::: : : :::::... ::.   .:    : ::: .. ::.. . 
NP_001 E-APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQG----YSNTETANVYLASDGE
     300        310       320       330           340       350    

     100       110       120       130       140        150        
pF1KE2 TSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFT-AIYRSEGERLQFMQ
        :  ... . .  ..  . .:  :.::: ::. ...:  ::.::  : :.:   ::.::.
NP_001 YSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR
          360       370       380       390       400       410    

      160       170       180       190       200       210        
pF1KE2 ALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGA
       :.. . .... .: :::.:: :   ::.::                             .
NP_001 AMHGMTKLTACQVATAFNLSRFSSACDVGGC----------------------------T
          420       430       440                                  

      220       230       240       250         260       270      
pF1KE2 GALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEE--QIDFQEGDFFKDPLPEADLY
       ::::.:    ::  ..::::.:...  :  ::.    .  :: :  ::::.:::: :.::
NP_001 GALARELAREYPRMQVTVFDLPDIIELAA-HFQPPGPQAVQIHFAAGDFFRDPLPSAELY
        450       460       470        480       490       500     

        280       290       300       310       320       330      
pF1KE2 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE
       .: :.:::: : :  .:: :. ..::::.:.:..:.::::..:    . . :::::::::
NP_001 VLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTE
         510       520       530       540       550       560     

        340       350       360       370      
pF1KE2 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK   
       :.::.  .:. ::   ::.. :  . :.. ::::: :   
NP_001 GKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
         570       580       590       600     

>>XP_005274840 (OMIM: 300162,400011) PREDICTED: N-acetyl  (621 aa)
 initn: 808 init1: 425 opt: 510  Z-score: 677.8  bits: 134.8 E(85289): 5.1e-31
Smith-Waterman score: 794; 40.3% identity (63.8% similar) in 367 aa overlap (10-373:287-618)

                                    10        20        30         
pF1KE2                      MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAE
                                     ::: .  .:::.:. :..::.: ::::: .
XP_005 DEKAEAGEAGQATAEAECHRTRETLPPFPTRLL-ELIEGFMLSKGLLTACKLKVFDLLKD
        260       270       280        290       300       310     

      40        50        60        70        80        90         
pF1KE2 APGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSP
         .:  .: .:. : ::: : : :::::... ::.   .:    : ::: .. ::.. . 
XP_005 E-APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQG----YSNTETANVYLASDGE
          320       330       340       350           360       370

     100       110       120       130       140        150        
pF1KE2 TSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFT-AIYRSEGERLQFMQ
        :  ... . .  ..  . .:  :.::: ::. ...:  ::.::  : :.:   ::.::.
XP_005 YSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR
              380       390       400       410       420       430

      160       170       180       190       200       210        
pF1KE2 ALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTRIKLETIILSKLSQGQKTKHRVFSLIGGA
       :.. . .... .: :::.:: :   ::.::                             .
XP_005 AMHGMTKLTACQVATAFNLSRFSSACDVGGC----------------------------T
              440       450       460                              

      220       230       240       250         260       270      
pF1KE2 GALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEE--QIDFQEGDFFKDPLPEADLY
       ::::.:    ::  ..::::.:...  :  ::.    .  :: :  ::::.:::: :.::
XP_005 GALARELAREYPRMQVTVFDLPDIIELAA-HFQPPGPQAVQIHFAAGDFFRDPLPSAELY
            470       480       490        500       510       520 

        280       290       300       310       320       330      
pF1KE2 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE
       .: :.:::: : :  .:: :. ..::::.:.:..:.::::..:    . . :::::::::
XP_005 VLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTE
             530       540       550       560       570       580 

        340       350       360       370      
pF1KE2 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK   
       :.::.  .:. ::   ::.. :  . :.. ::::: :   
XP_005 GKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
             590       600       610       620 




373 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 04:32:53 2016 done: Sun Nov  6 04:32:54 2016
 Total Scan time:  7.170 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com