FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8874, 164 aa 1>>>pF1KB8874 164 - 164 aa - 164 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3300+/-0.000713; mu= 10.6538+/- 0.043 mean_var=128.9670+/-24.955, 0's: 0 Z-trim(114.5): 16 B-trim: 17 in 1/52 Lambda= 0.112937 statistics sampled from 15083 (15096) to 15083 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.798), E-opt: 0.2 (0.464), width: 16 Scan time: 2.180 The best scores are: opt bits E(32554) CCDS13968.1 MAFF gene_id:23764|Hs108|chr22 ( 164) 1055 181.6 1.9e-46 CCDS54528.1 MAFF gene_id:23764|Hs108|chr22 ( 135) 877 152.5 9.1e-38 CCDS5325.1 MAFK gene_id:7975|Hs108|chr7 ( 156) 618 110.3 5.1e-25 CCDS11793.1 MAFG gene_id:4097|Hs108|chr17 ( 162) 547 98.8 1.6e-21 CCDS13311.1 MAFB gene_id:9935|Hs108|chr20 ( 323) 344 66.0 2.4e-11 >>CCDS13968.1 MAFF gene_id:23764|Hs108|chr22 (164 aa) initn: 1055 init1: 1055 opt: 1055 Z-score: 947.2 bits: 181.6 E(32554): 1.9e-46 Smith-Waterman score: 1055; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164) 10 20 30 40 50 60 pF1KB8 MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 NRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARS 70 80 90 100 110 120 130 140 150 160 pF1KB8 VAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS :::::::::::::::::::::::::::::::::::::::::::: CCDS13 VAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS 130 140 150 160 >>CCDS54528.1 MAFF gene_id:23764|Hs108|chr22 (135 aa) initn: 877 init1: 877 opt: 877 Z-score: 791.5 bits: 152.5 E(32554): 9.1e-38 Smith-Waterman score: 877; 100.0% identity (100.0% similar) in 135 aa overlap (30-164:1-135) 10 20 30 40 50 60 pF1KB8 MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLK ::::::::::::::::::::::::::::::: CCDS54 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLK 10 20 30 70 80 90 100 110 120 pF1KB8 NRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 NRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARS 40 50 60 70 80 90 130 140 150 160 pF1KB8 VAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS :::::::::::::::::::::::::::::::::::::::::::: CCDS54 VAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS 100 110 120 130 >>CCDS5325.1 MAFK gene_id:7975|Hs108|chr7 (156 aa) initn: 608 init1: 608 opt: 618 Z-score: 562.7 bits: 110.3 E(32554): 5.1e-25 Smith-Waterman score: 618; 68.0% identity (88.0% similar) in 150 aa overlap (1-148:1-148) 10 20 30 40 50 60 pF1KB8 MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLK :...: .::::.:.: .::.: :::. :...::::::.:::::. :::::::::::::: CCDS53 MTTNPKPNKALKVKKEAGENAPVLSDDELVSMSVRELNQHLRGLTKEEVTRLKQRRRTLK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 NRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARS :::::::::.::: :::::..:. ::..::.::::::..:::::::::.: :::: :::. CCDS53 NRGYAASCRIKRVTQKEELERQRVELQQEVEKLARENSSMRLELDALRSKYEALQTFART 70 80 90 100 110 120 130 140 150 160 pF1KB8 VAAARGPA--TLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS :: :::. . :: .::::::::: :.. CCDS53 VA--RGPVAPSKVATTSVITIVKSTELSSTSVPFSAAS 130 140 150 >>CCDS11793.1 MAFG gene_id:4097|Hs108|chr17 (162 aa) initn: 568 init1: 532 opt: 547 Z-score: 499.9 bits: 98.8 E(32554): 1.6e-21 Smith-Waterman score: 564; 65.4% identity (80.1% similar) in 156 aa overlap (1-142:1-156) 10 20 30 40 50 60 pF1KB8 MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLK :.. ..::::.::: .:: :.:: :. .::::::.:::::: ::...::::::::: CCDS11 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 NRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARS ::::::::::::: :::::.:::.::..::.::: :::.:.:::::::.: :::: :::. CCDS11 NRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFART 70 80 90 100 110 120 130 140 150 160 pF1KB8 VA-----AARGP--ATL-------VAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS :: :::: : : :: .:::::::: CCDS11 VARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS 130 140 150 160 >>CCDS13311.1 MAFB gene_id:9935|Hs108|chr20 (323 aa) initn: 374 init1: 333 opt: 344 Z-score: 317.3 bits: 66.0 E(32554): 2.4e-11 Smith-Waterman score: 344; 50.0% identity (80.6% similar) in 108 aa overlap (24-129:211-318) 10 20 30 40 50 pF1KB8 MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLK .::. :...:::::::::::.. .:: ::: CCDS13 QQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLK 190 200 210 220 230 240 60 70 80 90 100 110 pF1KB8 QRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEA :.:::::::::: ::: ::: ::..:...:..: ..:..: .: . . : :: . ::: CCDS13 QKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEK 250 260 270 280 290 300 120 130 140 150 160 pF1KB8 L--QGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS : .:: .. ... .:.. CCDS13 LANSGFREAGSTSDSPSSPEFFL 310 320 164 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:04:51 2016 done: Sun Nov 6 05:04:51 2016 Total Scan time: 2.180 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]