FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2083, 757 aa 1>>>pF1KE2083 757 - 757 aa - 757 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0747+/-0.000973; mu= 12.4348+/- 0.058 mean_var=114.2961+/-23.307, 0's: 0 Z-trim(108.2): 9 B-trim: 424 in 1/50 Lambda= 0.119966 statistics sampled from 10031 (10036) to 10031 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.308), width: 16 Scan time: 4.000 The best scores are: opt bits E(32554) CCDS13869.1 ASCC2 gene_id:84164|Hs108|chr22 ( 757) 5065 888.0 0 CCDS56226.1 ASCC2 gene_id:84164|Hs108|chr22 ( 681) 3972 698.8 7.2e-201 >>CCDS13869.1 ASCC2 gene_id:84164|Hs108|chr22 (757 aa) initn: 5065 init1: 5065 opt: 5065 Z-score: 4741.3 bits: 888.0 E(32554): 0 Smith-Waterman score: 5065; 100.0% identity (100.0% similar) in 757 aa overlap (1-757:1-757) 10 20 30 40 50 60 pF1KE2 MPALPLDQLQITHKDPKTGKLRTSPALHPEQKADRYFVLYKPPPKDNIPALVEEYLERAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MPALPLDQLQITHKDPKTGKLRTSPALHPEQKADRYFVLYKPPPKDNIPALVEEYLERAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 FVANDLDWLLALPHDKFWCQVIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 FVANDLDWLLALPHDKFWCQVIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RSVFLTFLRMSTHKESKDHFISPSAFGEILYNNFLFDIPKILDLCVLFGKGNSPLLQKMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 RSVFLTFLRMSTHKESKDHFISPSAFGEILYNNFLFDIPKILDLCVLFGKGNSPLLQKMI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS 670 680 690 700 710 720 730 740 750 pF1KE2 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS ::::::::::::::::::::::::::::::::::::: CCDS13 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 730 740 750 >>CCDS56226.1 ASCC2 gene_id:84164|Hs108|chr22 (681 aa) initn: 4138 init1: 3972 opt: 3972 Z-score: 3719.7 bits: 698.8 E(32554): 7.2e-201 Smith-Waterman score: 4347; 90.0% identity (90.0% similar) in 757 aa overlap (1-757:1-681) 10 20 30 40 50 60 pF1KE2 MPALPLDQLQITHKDPKTGKLRTSPALHPEQKADRYFVLYKPPPKDNIPALVEEYLERAT ::::::::::::::::::::::::::: CCDS56 MPALPLDQLQITHKDPKTGKLRTSPAL--------------------------------- 10 20 70 80 90 100 110 120 pF1KE2 FVANDLDWLLALPHDKFWCQVIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH :::::::::::::::::::::::::::::::::::::::: CCDS56 --------------------VIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH 30 40 50 60 130 140 150 160 170 180 pF1KE2 RSVFLTFLRMSTHKESKDHFISPSAFGEILYNNFLFDIPKILDLCVLFGKGNSPLLQKMI ::::::::::::::::: :::::::::::::::::::: CCDS56 RSVFLTFLRMSTHKESK-----------------------ILDLCVLFGKGNSPLLQKMI 70 80 90 100 190 200 210 220 230 240 pF1KE2 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL 110 120 130 140 150 160 250 260 270 280 290 300 pF1KE2 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE 170 180 190 200 210 220 310 320 330 340 350 360 pF1KE2 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE 230 240 250 260 270 280 370 380 390 400 410 420 pF1KE2 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI 290 300 310 320 330 340 430 440 450 460 470 480 pF1KE2 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP 350 360 370 380 390 400 490 500 510 520 530 540 pF1KE2 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF 410 420 430 440 450 460 550 560 570 580 590 600 pF1KE2 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ 470 480 490 500 510 520 610 620 630 640 650 660 pF1KE2 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED 530 540 550 560 570 580 670 680 690 700 710 720 pF1KE2 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS 590 600 610 620 630 640 730 740 750 pF1KE2 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS ::::::::::::::::::::::::::::::::::::: CCDS56 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 650 660 670 680 757 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:55:42 2016 done: Sun Nov 6 12:55:42 2016 Total Scan time: 4.000 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]