(Linear) (Six-base) MAPSORT of: KIEE3235.seq Check: 6161 from: 1 to: 1644 KIEE3235.orf With 182 enzymes: SgfI * March 22, 2012 16:26 .. AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 535 1000 1644 Size: 535 465 644 Fragments arranged by size: 644 535 465 AgeI A'CCGG_T Cuts at: 0 1183 1644 Size: 1183 461 AleI CACnn'nnGTG Cuts at: 0 945 1186 1519 1644 Size: 945 241 333 125 Fragments arranged by size: 945 333 241 125 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 963 1166 1264 1644 Size: 963 203 98 380 Fragments arranged by size: 963 380 203 98 ApaLI G'TGCA_C Cuts at: 0 886 1471 1644 Size: 886 585 173 Fragments arranged by size: 886 585 173 AvaI C'yCGr_G Cuts at: 0 59 1297 1644 Size: 59 1238 347 Fragments arranged by size: 1238 347 59 BanI G'GyrC_C Cuts at: 0 537 1258 1644 Size: 537 721 386 Fragments arranged by size: 721 537 386 BanII G_rGCy'C Cuts at: 0 656 1223 1298 1304 1644 Size: 656 567 75 6 340 Fragments arranged by size: 656 567 340 75 6 BbsI GAAGACnn'nnnn_ Cuts at: 0 337 1644 Size: 337 1307 BclI T'GATC_A Cuts at: 0 350 1644 Size: 350 1294 BfrBI ATG'CAT Cuts at: 0 1489 1644 Size: 1489 155 BglI GCCn_nnn'nGGC Cuts at: 0 1390 1644 Size: 1390 254 BglII A'GATC_T Cuts at: 0 668 1433 1644 Size: 668 765 211 Fragments arranged by size: 765 668 211 BlpI GC'TnA_GC Cuts at: 0 970 1644 Size: 970 674 Bme1580I G_kGCm'C Cuts at: 0 157 374 542 890 1475 1644 Size: 157 217 168 348 585 169 Fragments arranged by size: 585 348 217 169 168 157 BmgBI CAC'GTC Cuts at: 0 44 1248 1419 1644 Size: 44 1204 171 225 Fragments arranged by size: 1204 225 171 44 BmrI ACTGGGnnnn_n' Cuts at: 0 167 1644 Size: 167 1477 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 919 1644 Size: 919 725 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 490 1644 Size: 490 1154 BsaI GGTCTCn'nnnn_ Cuts at: 0 88 1024 1644 Size: 88 936 620 Fragments arranged by size: 936 620 88 BsaAI yAC'GTr Cuts at: 0 885 1344 1644 Size: 885 459 300 Fragments arranged by size: 885 459 300 BsaWI w'CCGG_w Cuts at: 0 1183 1644 Size: 1183 461 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 670 700 1081 1111 1644 Size: 670 30 381 30 533 Fragments arranged by size: 670 533 381 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 916 1636 1644 Size: 916 720 8 Fragments arranged by size: 916 720 8 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 898 1344 1644 Size: 898 446 300 Fragments arranged by size: 898 446 300 BsiEI CG_ry'CG Cuts at: 0 253 738 1581 1644 Size: 253 485 843 63 Fragments arranged by size: 843 485 253 63 BsiHKAI G_wGCw'C Cuts at: 0 656 890 988 1091 1304 1406 1475 1644 Size: 656 234 98 103 213 102 69 169 Fragments arranged by size: 656 234 213 169 103 102 98 69 Bsp1286I G_dGCh'C Cuts at: 0 157 374 542 656 890 988 1091 1223 Size: 157 217 168 114 234 98 103 132 Cuts at: 1223 1298 1304 1406 1475 1644 Size: 75 6 102 69 169 Fragments arranged by size: 234 217 169 168 157 132 114 103 102 98 75 69 6 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 984 1644 Size: 984 660 BsrBI CCG'CTC Cuts at: 0 848 1644 Size: 848 796 BsrDI GCAATG_nn' Cuts at: 0 123 1644 Size: 123 1521 BsrFI r'CCGG_y Cuts at: 0 74 1183 1204 1644 Size: 74 1109 21 440 Fragments arranged by size: 1109 440 74 21 BssHII G'CGCG_C Cuts at: 0 1200 1230 1644 Size: 1200 30 414 Fragments arranged by size: 1200 414 30 BstAPI GCAn_nnn'nTGC Cuts at: 0 885 1644 Size: 885 759 BstXI CCAn_nnnn'nTGG Cuts at: 0 306 819 1521 1644 Size: 306 513 702 123 Fragments arranged by size: 702 513 306 123 BstYI r'GATC_y Cuts at: 0 668 1433 1644 Size: 668 765 211 Fragments arranged by size: 765 668 211 Bsu36I CC'TnA_GG Cuts at: 0 1312 1424 1644 Size: 1312 112 220 Fragments arranged by size: 1312 220 112 BtgI C'CryG_G Cuts at: 0 392 1214 1370 1514 1644 Size: 392 822 156 144 130 Fragments arranged by size: 822 392 156 144 130 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 1349 1644 Size: 1349 295 BtsI GCAGTG_nn' Cuts at: 0 324 1400 1620 1644 Size: 324 1076 220 24 Fragments arranged by size: 1076 324 220 24 DraIII CAC_nnn'GTG Cuts at: 0 1419 1479 1644 Size: 1419 60 165 Fragments arranged by size: 1419 165 60 DrdI GACnn_nn'nnGTC Cuts at: 0 832 1531 1644 Size: 832 699 113 Fragments arranged by size: 832 699 113 EaeI y'GGCC_r Cuts at: 0 250 341 735 860 1382 1644 Size: 250 91 394 125 522 262 Fragments arranged by size: 522 394 262 250 125 91 EagI C'GGCC_G Cuts at: 0 250 735 1644 Size: 250 485 909 Fragments arranged by size: 909 485 250 EarI CTCTTCn'nnn_ Cuts at: 0 520 976 1644 Size: 520 456 668 Fragments arranged by size: 668 520 456 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 685 1644 Size: 685 959 EcoICRI GAG'CTC Cuts at: 0 654 1302 1644 Size: 654 648 342 Fragments arranged by size: 654 648 342 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 535 919 1000 1644 Size: 535 384 81 644 Fragments arranged by size: 644 535 384 81 EcoO109I rG'GnC_Cy Cuts at: 0 360 1644 Size: 360 1284 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 804 1644 Size: 804 840 FspI TGC'GCA Cuts at: 0 1252 1644 Size: 1252 392 FspAI rTGC'GCAy Cuts at: 0 1252 1644 Size: 1252 392 HaeII r_GCGC'y Cuts at: 0 165 1644 Size: 165 1479 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 670 702 1490 1522 1644 Size: 670 32 788 32 122 Fragments arranged by size: 788 670 122 32 32 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 629 713 1644 Size: 629 84 931 Fragments arranged by size: 931 629 84 MscI TGG'CCA Cuts at: 0 343 862 1644 Size: 343 519 782 Fragments arranged by size: 782 519 343 MslI CAynn'nnrTG Cuts at: 0 470 945 1186 1519 1644 Size: 470 475 241 333 125 Fragments arranged by size: 475 470 333 241 125 MspA1I CmG'CkG Cuts at: 0 897 957 1644 Size: 897 60 687 Fragments arranged by size: 897 687 60 NaeI GCC'GGC Cuts at: 0 76 1644 Size: 76 1568 NcoI C'CATG_G Cuts at: 0 392 1214 1644 Size: 392 822 430 Fragments arranged by size: 822 430 392 NgoMIV G'CCGG_C Cuts at: 0 74 1644 Size: 74 1570 NotI GC'GGCC_GC Cuts at: 0 250 1644 Size: 250 1394 NruI TCG'CGA Cuts at: 0 1040 1644 Size: 1040 604 NsiI A_TGCA'T Cuts at: 0 1491 1644 Size: 1491 153 NspI r_CATG'y Cuts at: 0 1008 1644 Size: 1008 636 PasI CC'CwG_GG Cuts at: 0 374 1644 Size: 374 1270 PflMI CCAn_nnn'nTGG Cuts at: 0 1564 1644 Size: 1564 80 PfoI T'CCnGG_A Cuts at: 0 656 1406 1644 Size: 656 750 238 Fragments arranged by size: 750 656 238 PmlI CAC'GTG Cuts at: 0 885 1344 1644 Size: 885 459 300 Fragments arranged by size: 885 459 300 PvuII CAG'CTG Cuts at: 0 897 1644 Size: 897 747 SacI G_AGCT'C Cuts at: 0 656 1304 1644 Size: 656 648 340 Fragments arranged by size: 656 648 340 SapI GCTCTTCn'nnn_ Cuts at: 0 976 1644 Size: 976 668 SgrAI Cr'CCGG_yG Cuts at: 0 1183 1204 1644 Size: 1183 21 440 Fragments arranged by size: 1183 440 21 SmlI C'TyrA_G Cuts at: 0 505 1644 Size: 505 1139 SphI G_CATG'C Cuts at: 0 1008 1644 Size: 1008 636 StuI AGG'CCT Cuts at: 0 292 1644 Size: 292 1352 StyI C'CwwG_G Cuts at: 0 392 1214 1322 1644 Size: 392 822 108 322 Fragments arranged by size: 822 392 322 108 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 366 482 1644 Size: 366 116 1162 Fragments arranged by size: 1162 366 116 TatI w'GTAC_w Cuts at: 0 764 797 1644 Size: 764 33 847 Fragments arranged by size: 847 764 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1081 1113 1644 Size: 1081 32 531 Fragments arranged by size: 1081 531 32 Tth111I GACn'n_nGTC Cuts at: 0 1120 1600 1644 Size: 1120 480 44 Fragments arranged by size: 1120 480 44 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 816 1644 Size: 816 828 Enzymes that do cut: AcuI AgeI AleI AlfI ApaLI AvaI BanI BanII BbsI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BpmI BpuEI BsaI BsaAI BsaWI BsaXI BseRI BsgI BsiEI BsiHKAI Bsp1286I BspMI BsrBI BsrDI BsrFI BssHII BstAPI BstXI BstYI Bsu36I BtgI BtgZI BtsI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoO109I FalI FspI FspAI HaeII Hin4I MmeI MscI MslI MspA1I NaeI NcoI NgoMIV NotI NruI NsiI NspI PasI PflMI PfoI PmlI PvuII SacI SapI SgrAI SmlI SphI StuI StyI TaqII TatI TstI Tth111I XcmI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AfeI AflII AflIII AhdI AloI AlwNI ApaI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbeI BbvCI BcgI BciVI BmtI BplI Bpu10I BsaBI BsaHI BseYI BsiWI BsmI BsmBI BspEI BspHI BsrGI BssSI BstBI BstEII BstZ17I ClaI CspCI DraI EcoNI EcoRI EcoRV FseI HincII HindIII HpaI KasI KpnI MfeI MluI NarI NdeI NheI PacI PciI PmeI PpiI PpuMI PshAI PsiI PspOMI PspXI PsrI PstI PvuI RsrII SacII SalI SanDI SbfI ScaI SexAI SfcI SfiI SfoI SgfI SmaI SnaBI SpeI SrfI SspI SwaI XbaI XhoI XmaI XmnI ZraI