FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2599, 406 aa 1>>>pF1KE2599 406 - 406 aa - 406 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8388+/-0.000352; mu= 14.7293+/- 0.022 mean_var=82.6286+/-16.964, 0's: 0 Z-trim(115.8): 33 B-trim: 756 in 1/51 Lambda= 0.141094 statistics sampled from 26548 (26580) to 26548 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.312), width: 16 Scan time: 6.550 The best scores are: opt bits E(85289) XP_011527078 (OMIM: 610919) PREDICTED: mitochondri ( 406) 2737 566.8 3.2e-161 XP_016883295 (OMIM: 610919) PREDICTED: mitochondri ( 406) 2737 566.8 3.2e-161 XP_005260450 (OMIM: 610919) PREDICTED: mitochondri ( 406) 2737 566.8 3.2e-161 NP_056481 (OMIM: 610919) mitochondrial ribosome-as ( 406) 2737 566.8 3.2e-161 XP_006723837 (OMIM: 610919) PREDICTED: mitochondri ( 422) 2737 566.9 3.4e-161 XP_016883294 (OMIM: 610919) PREDICTED: mitochondri ( 434) 2737 566.9 3.4e-161 XP_016883297 (OMIM: 610919) PREDICTED: mitochondri ( 332) 1869 390.1 4.2e-108 XP_016883296 (OMIM: 610919) PREDICTED: mitochondri ( 360) 1869 390.1 4.5e-108 NP_149098 (OMIM: 610920) GTP-binding protein 10 is ( 387) 485 108.4 3.1e-23 NP_001036182 (OMIM: 610920) GTP-binding protein 10 ( 308) 393 89.6 1.1e-17 NP_004138 (OMIM: 603952) developmentally-regulated ( 367) 250 60.6 7.4e-09 NP_001317073 (OMIM: 602986) developmentally-regula ( 343) 200 50.4 8.1e-06 NP_001379 (OMIM: 602986) developmentally-regulated ( 364) 200 50.4 8.5e-06 XP_011522006 (OMIM: 602986) PREDICTED: development ( 364) 200 50.4 8.5e-06 XP_005256556 (OMIM: 602986) PREDICTED: development ( 385) 200 50.4 8.9e-06 >>XP_011527078 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161 Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406) 10 20 30 40 50 60 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR 310 320 330 340 350 360 370 380 390 400 pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW :::::::::::::::::::::::::::::::::::::::::::::: XP_011 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW 370 380 390 400 >>XP_016883295 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161 Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406) 10 20 30 40 50 60 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR 310 320 330 340 350 360 370 380 390 400 pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW :::::::::::::::::::::::::::::::::::::::::::::: XP_016 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW 370 380 390 400 >>XP_005260450 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161 Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406) 10 20 30 40 50 60 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR 310 320 330 340 350 360 370 380 390 400 pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW :::::::::::::::::::::::::::::::::::::::::::::: XP_005 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW 370 380 390 400 >>NP_056481 (OMIM: 610919) mitochondrial ribosome-associ (406 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161 Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406) 10 20 30 40 50 60 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR 310 320 330 340 350 360 370 380 390 400 pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW :::::::::::::::::::::::::::::::::::::::::::::: NP_056 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW 370 380 390 400 >>XP_006723837 (OMIM: 610919) PREDICTED: mitochondrial r (422 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.0 bits: 566.9 E(85289): 3.4e-161 Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:17-422) 10 20 30 40 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLL :::::::::::::::::::::::::::::::::::::::::::: XP_006 MISSQCIETYDTSYGAMAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE2 SVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPD 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE2 GGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE2 EGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTV 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE2 AHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIR 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE2 GAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVA 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE2 NKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPL 370 380 390 400 410 420 pF1KE2 RW :: XP_006 RW >>XP_016883294 (OMIM: 610919) PREDICTED: mitochondrial r (434 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 3014.9 bits: 566.9 E(85289): 3.4e-161 Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:29-434) 10 20 30 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPS :::::::::::::::::::::::::::::::: XP_016 MRPSSSVSVSCPALNQVSHFANLTSVGAMAPARCFSARLRTVFQGVGHWALSTWAGLKPS 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE2 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE2 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE2 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE2 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE2 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYE 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE2 KGLSARPHAIVANKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KGLSARPHAIVANKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAY 370 380 390 400 410 420 400 pF1KE2 AEAELGQGRQPLRW :::::::::::::: XP_016 AEAELGQGRQPLRW 430 >>XP_016883297 (OMIM: 610919) PREDICTED: mitochondrial r (332 aa) initn: 1869 init1: 1869 opt: 1869 Z-score: 2061.7 bits: 390.1 E(85289): 4.2e-108 Smith-Waterman score: 1869; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275) 10 20 30 40 50 60 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI ::::::::::::::::::::::::::::::::::: XP_016 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAGRTSRILPKWPTSPASYEAPTRTGV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR XP_016 WGPPSSGTSSAAAFSCSWWIFLSLSRGLKLTI 310 320 330 >>XP_016883296 (OMIM: 610919) PREDICTED: mitochondrial r (360 aa) initn: 1869 init1: 1869 opt: 1869 Z-score: 2061.2 bits: 390.1 E(85289): 4.5e-108 Smith-Waterman score: 1869; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:29-303) 10 20 30 pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPS :::::::::::::::::::::::::::::::: XP_016 MRPSSSVSVSCPALNQVSHFANLTSVGAMAPARCFSARLRTVFQGVGHWALSTWAGLKPS 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE2 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE2 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE2 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE2 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE2 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYE ::: XP_016 QIAGRTSRILPKWPTSPASYEAPTRTGVWGPPSSGTSSAAAFSCSWWIFLSLSRGLKLTI 310 320 330 340 350 360 >>NP_149098 (OMIM: 610920) GTP-binding protein 10 isofor (387 aa) initn: 635 init1: 447 opt: 485 Z-score: 538.2 bits: 108.4 E(85289): 3.1e-23 Smith-Waterman score: 673; 39.2% identity (62.7% similar) in 367 aa overlap (68-396:9-350) 40 50 60 70 80 90 pF1KE2 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE ...: :.: :... ::.:: : NP_149 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------ 10 20 30 100 110 120 130 140 150 pF1KE2 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG :: ::.::.:: : . : :. .:... .:: . : .: ..:: : .: NP_149 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG 40 50 60 70 80 160 170 180 190 200 pF1KE2 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG : :::: ... :.:.....:. .:. ..: :: ::: :: :. NP_149 KDCEIPVPVGISVTDENGKIIGELNKENDRILVAQGGLGGKLLTNFL------PL----- 90 100 110 120 130 210 220 230 240 250 260 pF1KE2 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE ::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . : NP_149 -KGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS 140 150 160 170 180 190 270 280 290 300 310 320 pF1KE2 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQVDD---- ::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : :: NP_149 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET 200 210 220 230 240 250 330 340 350 360 pF1KE2 ---LKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG------- : :::.:.. :...: ...::.:::.:: . .:::.. :: NP_149 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE 260 270 280 290 300 310 370 380 390 400 pF1KE2 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW :..: .::.:::..:.: .. : :. : NP_149 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP 320 330 340 350 360 370 NP_149 PSKHAVTTSKMDII 380 >>NP_001036182 (OMIM: 610920) GTP-binding protein 10 iso (308 aa) initn: 513 init1: 358 opt: 393 Z-score: 438.4 bits: 89.6 E(85289): 1.1e-17 Smith-Waterman score: 482; 40.6% identity (62.3% similar) in 244 aa overlap (184-396:35-271) 160 170 180 190 200 210 pF1KE2 YIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQ ::: ::::. ... .:: . . . NP_001 SCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPR 10 20 30 40 50 60 220 230 240 250 260 270 pF1KE2 QRVLHLELKTVAHAGMVG-FPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL .: :: .: . :::::::::: .:.:.::.:.: ::::::..: . : NP_001 KRF-------VAGVGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFK 70 80 90 100 110 280 290 300 310 320 pF1KE2 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQVDD------- ::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : :: NP_001 QISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIIL 120 130 140 150 160 170 330 340 350 360 pF1KE2 LKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG---------- : :::.:.. :...: ...::.:::.:: . .:::.. :: NP_001 LTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTV 180 190 200 210 220 230 370 380 390 400 pF1KE2 --QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW :..: .::.:::..:.: .. : :. : NP_001 EFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEPPSK 240 250 260 270 280 290 NP_001 HAVTTSKMDII 300 406 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:45:50 2016 done: Tue Nov 8 16:45:51 2016 Total Scan time: 6.550 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]