FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5634, 584 aa 1>>>pF1KE5634 584 - 584 aa - 584 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.6322+/-0.000949; mu= 4.8541+/- 0.057 mean_var=186.1242+/-36.852, 0's: 0 Z-trim(112.0): 25 B-trim: 0 in 0/53 Lambda= 0.094010 statistics sampled from 12850 (12862) to 12850 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.395), width: 16 Scan time: 2.610 The best scores are: opt bits E(32554) CCDS13444.1 BCAS1 gene_id:8537|Hs108|chr20 ( 584) 3826 531.3 1.2e-150 CCDS82631.1 BCAS1 gene_id:8537|Hs108|chr20 ( 506) 2609 366.2 5.4e-101 >>CCDS13444.1 BCAS1 gene_id:8537|Hs108|chr20 (584 aa) initn: 3826 init1: 3826 opt: 3826 Z-score: 2817.8 bits: 531.3 E(32554): 1.2e-150 Smith-Waterman score: 3826; 100.0% identity (100.0% similar) in 584 aa overlap (1-584:1-584) 10 20 30 40 50 60 pF1KE5 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEENVVCESPVEIIKSKEVESALQTVDLNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEENVVCESPVEIIKSKEVESALQTVDLNE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 GDAAPEPTEAKLKREESKPRTSLMAFLRQMSVKGDGGITHSEEINGKDSSCQTSDSTEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GDAAPEPTEAKLKREESKPRTSLMAFLRQMSVKGDGGITHSEEINGKDSSCQTSDSTEKT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD 490 500 510 520 530 540 550 560 570 580 pF1KE5 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK :::::::::::::::::::::::::::::::::::::::::::: CCDS13 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK 550 560 570 580 >>CCDS82631.1 BCAS1 gene_id:8537|Hs108|chr20 (506 aa) initn: 3313 init1: 2589 opt: 2609 Z-score: 1926.7 bits: 366.2 E(32554): 5.4e-101 Smith-Waterman score: 3161; 86.6% identity (86.6% similar) in 584 aa overlap (1-584:1-506) 10 20 30 40 50 60 pF1KE5 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEENVVCESPVEIIKSKEVESALQTVDLNE :::::::::::::::::::::::::::::::::: CCDS82 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEEN-------------------------- 370 380 390 430 440 450 460 470 480 pF1KE5 GDAAPEPTEAKLKREESKPRTSLMAFLRQMSVKGDGGITHSEEINGKDSSCQTSDSTEKT :::::::: CCDS82 ----------------------------------------------------TSDSTEKT 400 490 500 510 520 530 540 pF1KE5 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD 410 420 430 440 450 460 550 560 570 580 pF1KE5 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK :::::::::::::::::::::::::::::::::::::::::::: CCDS82 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK 470 480 490 500 584 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:23:21 2016 done: Tue Nov 8 05:23:21 2016 Total Scan time: 2.610 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]