FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5417, 329 aa 1>>>pF1KE5417 329 - 329 aa - 329 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2674+/-0.000311; mu= 17.8850+/- 0.020 mean_var=87.4334+/-17.386, 0's: 0 Z-trim(117.7): 7 B-trim: 244 in 1/50 Lambda= 0.137163 statistics sampled from 29855 (29862) to 29855 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.35), width: 16 Scan time: 7.420 The best scores are: opt bits E(85289) NP_443183 (OMIM: 611388) deoxynucleotidyltransfera ( 329) 2236 452.0 8.2e-127 >>NP_443183 (OMIM: 611388) deoxynucleotidyltransferase t (329 aa) initn: 2236 init1: 2236 opt: 2236 Z-score: 2397.7 bits: 452.0 E(85289): 8.2e-127 Smith-Waterman score: 2236; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329) 10 20 30 40 50 60 pF1KE5 MGATGDAEQPRGPSGAERGGLELGDAGAAGQLVLTNPWNIMIKHRQVQRRGRRSQMTTSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_443 MGATGDAEQPRGPSGAERGGLELGDAGAAGQLVLTNPWNIMIKHRQVQRRGRRSQMTTSF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TDPAISMDLLRAVLQPSINEEIQTVFNKYMKFFQKAALNVRDNVGEEVDAEQLIQEACRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_443 TDPAISMDLLRAVLQPSINEEIQTVFNKYMKFFQKAALNVRDNVGEEVDAEQLIQEACRS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 CLEQAKLLFSDGEKVIPRLTHELPGIKRGRQAEEECAHRGSPLPKKRKGRPPGHILSSDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_443 CLEQAKLLFSDGEKVIPRLTHELPGIKRGRQAEEECAHRGSPLPKKRKGRPPGHILSSDR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 AAAGMVWKPKSCEPIRREGPKWDPARLNESTTFVLGSRANKALGMGGTRGRIYIKHPHLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_443 AAAGMVWKPKSCEPIRREGPKWDPARLNESTTFVLGSRANKALGMGGTRGRIYIKHPHLF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDLAASDDYRGCLDLKLEELKSFVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_443 KYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDLAASDDYRGCLDLKLEELKSFVLP 250 260 270 280 290 300 310 320 pF1KE5 SWMVEKMRKYMETLRTENEHRAVEAPPQT ::::::::::::::::::::::::::::: NP_443 SWMVEKMRKYMETLRTENEHRAVEAPPQT 310 320 329 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:33:07 2016 done: Tue Nov 8 00:33:09 2016 Total Scan time: 7.420 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]