FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5417, 329 aa 1>>>pF1KE5417 329 - 329 aa - 329 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4791+/-0.000745; mu= 16.4884+/- 0.045 mean_var=85.3320+/-16.650, 0's: 0 Z-trim(110.5): 14 B-trim: 0 in 0/49 Lambda= 0.138841 statistics sampled from 11641 (11648) to 11641 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.358), width: 16 Scan time: 1.660 The best scores are: opt bits E(32554) CCDS13369.1 DNTTIP1 gene_id:116092|Hs108|chr20 ( 329) 2236 457.3 7.9e-129 >>CCDS13369.1 DNTTIP1 gene_id:116092|Hs108|chr20 (329 aa) initn: 2236 init1: 2236 opt: 2236 Z-score: 2426.3 bits: 457.3 E(32554): 7.9e-129 Smith-Waterman score: 2236; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329) 10 20 30 40 50 60 pF1KE5 MGATGDAEQPRGPSGAERGGLELGDAGAAGQLVLTNPWNIMIKHRQVQRRGRRSQMTTSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MGATGDAEQPRGPSGAERGGLELGDAGAAGQLVLTNPWNIMIKHRQVQRRGRRSQMTTSF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TDPAISMDLLRAVLQPSINEEIQTVFNKYMKFFQKAALNVRDNVGEEVDAEQLIQEACRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TDPAISMDLLRAVLQPSINEEIQTVFNKYMKFFQKAALNVRDNVGEEVDAEQLIQEACRS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 CLEQAKLLFSDGEKVIPRLTHELPGIKRGRQAEEECAHRGSPLPKKRKGRPPGHILSSDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 CLEQAKLLFSDGEKVIPRLTHELPGIKRGRQAEEECAHRGSPLPKKRKGRPPGHILSSDR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 AAAGMVWKPKSCEPIRREGPKWDPARLNESTTFVLGSRANKALGMGGTRGRIYIKHPHLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AAAGMVWKPKSCEPIRREGPKWDPARLNESTTFVLGSRANKALGMGGTRGRIYIKHPHLF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDLAASDDYRGCLDLKLEELKSFVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDLAASDDYRGCLDLKLEELKSFVLP 250 260 270 280 290 300 310 320 pF1KE5 SWMVEKMRKYMETLRTENEHRAVEAPPQT ::::::::::::::::::::::::::::: CCDS13 SWMVEKMRKYMETLRTENEHRAVEAPPQT 310 320 329 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:33:07 2016 done: Tue Nov 8 00:33:07 2016 Total Scan time: 1.660 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]