FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9616, 356 aa 1>>>pF1KE9616 356 - 356 aa - 356 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8523+/-0.000964; mu= 9.6192+/- 0.058 mean_var=107.1285+/-21.203, 0's: 0 Z-trim(107.4): 17 B-trim: 46 in 1/51 Lambda= 0.123914 statistics sampled from 9519 (9527) to 9519 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.673), E-opt: 0.2 (0.293), width: 16 Scan time: 2.890 The best scores are: opt bits E(32554) CCDS13286.1 DSN1 gene_id:79980|Hs108|chr20 ( 356) 2305 422.7 2.3e-118 CCDS46597.1 DSN1 gene_id:79980|Hs108|chr20 ( 340) 2207 405.2 4.2e-113 CCDS46596.1 DSN1 gene_id:79980|Hs108|chr20 ( 249) 1537 285.3 3.7e-77 >>CCDS13286.1 DSN1 gene_id:79980|Hs108|chr20 (356 aa) initn: 2305 init1: 2305 opt: 2305 Z-score: 2238.4 bits: 422.7 E(32554): 2.3e-118 Smith-Waterman score: 2305; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356) 10 20 30 40 50 60 pF1KE9 MTSVTRSEIIDEKGPVMSKTHDHQLESSLSPVEVFAKTSASLEMNQGVSEERIHLGSSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MTSVTRSEIIDEKGPVMSKTHDHQLESSLSPVEVFAKTSASLEMNQGVSEERIHLGSSPK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 KGGNCDLSHQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KGGNCDLSHQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 SRSISVDLAESKRLGCLLLSSFQFSIQKLEPFLRDTKGFSLESFRAKASSLSEELKHFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SRSISVDLAESKRLGCLLLSSFQFSIQKLEPFLRDTKGFSLESFRAKASSLSEELKHFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 GLETDGTLQKCFEDSNGKASDFSLEASVAEMKEYITKFSLERQTWDQLLLHYQQEAKEIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GLETDGTLQKCFEDSNGKASDFSLEASVAEMKEYITKFSLERQTWDQLLLHYQQEAKEIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 SRGSTEAKITEVKVEPMTYLGSSQNEVLNTKPDYQKILQNQSKVFDCMELVMDELQGSVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SRGSTEAKITEVKVEPMTYLGSSQNEVLNTKPDYQKILQNQSKVFDCMELVMDELQGSVK 250 260 270 280 290 300 310 320 330 340 350 pF1KE9 QLQAFMDESTQCFQKVSVQLGKRSMQQLDPSPARKLLKLQLQNPPAIHGSGSGSCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QLQAFMDESTQCFQKVSVQLGKRSMQQLDPSPARKLLKLQLQNPPAIHGSGSGSCQ 310 320 330 340 350 >>CCDS46597.1 DSN1 gene_id:79980|Hs108|chr20 (340 aa) initn: 2207 init1: 2207 opt: 2207 Z-score: 2144.0 bits: 405.2 E(32554): 4.2e-113 Smith-Waterman score: 2207; 100.0% identity (100.0% similar) in 340 aa overlap (17-356:1-340) 10 20 30 40 50 60 pF1KE9 MTSVTRSEIIDEKGPVMSKTHDHQLESSLSPVEVFAKTSASLEMNQGVSEERIHLGSSPK :::::::::::::::::::::::::::::::::::::::::::: CCDS46 MSKTHDHQLESSLSPVEVFAKTSASLEMNQGVSEERIHLGSSPK 10 20 30 40 70 80 90 100 110 120 pF1KE9 KGGNCDLSHQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KGGNCDLSHQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITEL 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE9 SRSISVDLAESKRLGCLLLSSFQFSIQKLEPFLRDTKGFSLESFRAKASSLSEELKHFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SRSISVDLAESKRLGCLLLSSFQFSIQKLEPFLRDTKGFSLESFRAKASSLSEELKHFAD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE9 GLETDGTLQKCFEDSNGKASDFSLEASVAEMKEYITKFSLERQTWDQLLLHYQQEAKEIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GLETDGTLQKCFEDSNGKASDFSLEASVAEMKEYITKFSLERQTWDQLLLHYQQEAKEIL 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE9 SRGSTEAKITEVKVEPMTYLGSSQNEVLNTKPDYQKILQNQSKVFDCMELVMDELQGSVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SRGSTEAKITEVKVEPMTYLGSSQNEVLNTKPDYQKILQNQSKVFDCMELVMDELQGSVK 230 240 250 260 270 280 310 320 330 340 350 pF1KE9 QLQAFMDESTQCFQKVSVQLGKRSMQQLDPSPARKLLKLQLQNPPAIHGSGSGSCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QLQAFMDESTQCFQKVSVQLGKRSMQQLDPSPARKLLKLQLQNPPAIHGSGSGSCQ 290 300 310 320 330 340 >>CCDS46596.1 DSN1 gene_id:79980|Hs108|chr20 (249 aa) initn: 1537 init1: 1537 opt: 1537 Z-score: 1498.7 bits: 285.3 E(32554): 3.7e-77 Smith-Waterman score: 1537; 99.6% identity (99.6% similar) in 240 aa overlap (117-356:10-249) 90 100 110 120 130 140 pF1KE9 ASYQDRRQSWRRASMKETNRRKSLHPIHQGITELSRSISVDLAESKRLGCLLLSSFQFSI : :::::::::::::::::::::::::::: CCDS46 MTSVTRSEIIDELSRSISVDLAESKRLGCLLLSSFQFSI 10 20 30 150 160 170 180 190 200 pF1KE9 QKLEPFLRDTKGFSLESFRAKASSLSEELKHFADGLETDGTLQKCFEDSNGKASDFSLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QKLEPFLRDTKGFSLESFRAKASSLSEELKHFADGLETDGTLQKCFEDSNGKASDFSLEA 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE9 SVAEMKEYITKFSLERQTWDQLLLHYQQEAKEILSRGSTEAKITEVKVEPMTYLGSSQNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SVAEMKEYITKFSLERQTWDQLLLHYQQEAKEILSRGSTEAKITEVKVEPMTYLGSSQNE 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE9 VLNTKPDYQKILQNQSKVFDCMELVMDELQGSVKQLQAFMDESTQCFQKVSVQLGKRSMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 VLNTKPDYQKILQNQSKVFDCMELVMDELQGSVKQLQAFMDESTQCFQKVSVQLGKRSMQ 160 170 180 190 200 210 330 340 350 pF1KE9 QLDPSPARKLLKLQLQNPPAIHGSGSGSCQ :::::::::::::::::::::::::::::: CCDS46 QLDPSPARKLLKLQLQNPPAIHGSGSGSCQ 220 230 240 356 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:24:38 2016 done: Sun Nov 6 06:24:38 2016 Total Scan time: 2.890 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]