FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6509, 176 aa 1>>>pF1KE6509 176 - 176 aa - 176 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3756+/-0.000747; mu= 11.6391+/- 0.045 mean_var=57.2433+/-11.481, 0's: 0 Z-trim(107.7): 5 B-trim: 0 in 0/49 Lambda= 0.169517 statistics sampled from 9714 (9716) to 9714 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.298), width: 16 Scan time: 1.390 The best scores are: opt bits E(32554) CCDS13081.1 PRND gene_id:23627|Hs108|chr20 ( 176) 1229 308.4 1.4e-84 >>CCDS13081.1 PRND gene_id:23627|Hs108|chr20 (176 aa) initn: 1229 init1: 1229 opt: 1229 Z-score: 1631.7 bits: 308.4 E(32554): 1.4e-84 Smith-Waterman score: 1229; 99.4% identity (99.4% similar) in 176 aa overlap (1-176:1-176) 10 20 30 40 50 60 pF1KE6 MRKHLSWWWLATVCMLLFSHLSAVQTRGIKHRIKWNRKALPSTAQITEAQVAENRPGAFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MRKHLSWWWLATVCMLLFSHLSAVQTRGIKHRIKWNRKALPSTAQITEAQVAENRPGAFI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KQGRKLDIDFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQAANQGEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KQGRKLDIDFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQAANQGEF 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 QKPDNKLHQQVLWRLVQELCSLKHCEFWLERGAGLRVTMHQPVLLCLLALIWLMVK ::::::::::::::::::::::::::::::::::::::::::::::::::::: :: CCDS13 QKPDNKLHQQVLWRLVQELCSLKHCEFWLERGAGLRVTMHQPVLLCLLALIWLTVK 130 140 150 160 170 176 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:57:04 2016 done: Tue Nov 8 13:57:04 2016 Total Scan time: 1.390 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]