FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3510, 403 aa 1>>>pF1KE3510 403 - 403 aa - 403 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3003+/-0.000784; mu= 17.2467+/- 0.047 mean_var=70.0724+/-13.726, 0's: 0 Z-trim(108.2): 31 B-trim: 2 in 1/51 Lambda= 0.153215 statistics sampled from 10057 (10086) to 10057 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.31), width: 16 Scan time: 3.100 The best scores are: opt bits E(32554) CCDS13002.1 TBC1D20 gene_id:128637|Hs108|chr20 ( 403) 2683 602.0 3.1e-172 >>CCDS13002.1 TBC1D20 gene_id:128637|Hs108|chr20 (403 aa) initn: 2683 init1: 2683 opt: 2683 Z-score: 3205.7 bits: 602.0 E(32554): 3.1e-172 Smith-Waterman score: 2683; 100.0% identity (100.0% similar) in 403 aa overlap (1-403:1-403) 10 20 30 40 50 60 pF1KE3 MALRSAQGDGPTSGHWDGGAEKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MALRSAQGDGPTSGHWDGGAEKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQRE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 TMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 FFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 FFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLT 310 320 330 340 350 360 370 380 390 400 pF1KE3 KPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP ::::::::::::::::::::::::::::::::::::::::::: CCDS13 KPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP 370 380 390 400 403 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:34:34 2016 done: Sat Nov 5 22:34:35 2016 Total Scan time: 3.100 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]