Result of FASTA (omim) for
pFN21AB7733
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7733, 433 aa
1>>>pF1KB7733 433 - 433 aa - 433 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8980+/-0.000528; mu= 11.6511+/- 0.033
mean_var=326.7282+/-68.748, 0's: 0 Z-trim(116.0): 1759 B-trim: 23 in 1/53
Lambda= 0.070955
statistics sampled from 24737 (26902) to 24737 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.315), width: 16
Scan time: 9.330
The best scores are: opt bits E(85289)
XP_016881947 (OMIM: 613419) PREDICTED: zinc finger ( 433) 2946 316.1 1.1e-85
XP_011524909 (OMIM: 613419) PREDICTED: zinc finger ( 433) 2946 316.1 1.1e-85
NP_689890 (OMIM: 613419) zinc finger and SCAN doma ( 433) 2946 316.1 1.1e-85
XP_005249152 (OMIM: 611643) PREDICTED: zinc finger ( 545) 531 69.1 3.3e-11
NP_061983 (OMIM: 611643) zinc finger protein with ( 545) 531 69.1 3.3e-11
XP_006715278 (OMIM: 612791) PREDICTED: zinc finger ( 538) 524 68.3 5.3e-11
NP_077819 (OMIM: 612791) zinc finger protein with ( 538) 524 68.3 5.3e-11
NP_001229823 (OMIM: 612791) zinc finger protein wi ( 538) 524 68.3 5.3e-11
XP_016866809 (OMIM: 612791) PREDICTED: zinc finger ( 509) 520 67.9 6.9e-11
XP_006715279 (OMIM: 612791) PREDICTED: zinc finger ( 509) 520 67.9 6.9e-11
XP_006723255 (OMIM: 165260) PREDICTED: zinc finger ( 491) 493 65.1 4.6e-10
NP_862829 (OMIM: 165260) zinc finger and SCAN doma ( 491) 493 65.1 4.6e-10
XP_011525219 (OMIM: 165260) PREDICTED: zinc finger ( 491) 493 65.1 4.6e-10
NP_001308045 (OMIM: 165260) zinc finger and SCAN d ( 491) 493 65.1 4.6e-10
XP_016873758 (OMIM: 605015) PREDICTED: zinc finger ( 592) 455 61.3 7.5e-09
XP_011518659 (OMIM: 605015) PREDICTED: zinc finger ( 592) 455 61.3 7.5e-09
XP_006718372 (OMIM: 605015) PREDICTED: zinc finger ( 592) 455 61.3 7.5e-09
XP_005253186 (OMIM: 605015) PREDICTED: zinc finger ( 592) 455 61.3 7.5e-09
XP_005253185 (OMIM: 605015) PREDICTED: zinc finger ( 606) 455 61.4 7.6e-09
XP_006718371 (OMIM: 605015) PREDICTED: zinc finger ( 606) 455 61.4 7.6e-09
NP_037381 (OMIM: 605015) zinc finger protein 214 [ ( 606) 455 61.4 7.6e-09
XP_011518657 (OMIM: 605015) PREDICTED: zinc finger ( 617) 455 61.4 7.6e-09
NP_001007089 (OMIM: 314993) zinc finger protein 18 ( 620) 455 61.4 7.7e-09
NP_008893 (OMIM: 314993) zinc finger protein 182 i ( 639) 455 61.4 7.8e-09
NP_001171570 (OMIM: 314993) zinc finger protein 18 ( 639) 455 61.4 7.8e-09
NP_001316592 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316585 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316586 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
XP_011517658 (OMIM: 194528) PREDICTED: zinc finger ( 420) 438 59.3 2.1e-08
NP_001316593 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316588 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316587 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316590 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316591 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316589 (OMIM: 194528) zinc finger protein 25 ( 420) 438 59.3 2.1e-08
NP_001316584 (OMIM: 194528) zinc finger protein 25 ( 455) 438 59.4 2.2e-08
NP_001316580 (OMIM: 194528) zinc finger protein 25 ( 456) 438 59.4 2.2e-08
NP_659448 (OMIM: 194528) zinc finger protein 25 is ( 456) 438 59.4 2.2e-08
NP_001316583 (OMIM: 194528) zinc finger protein 25 ( 456) 438 59.4 2.2e-08
NP_001316582 (OMIM: 194528) zinc finger protein 25 ( 456) 438 59.4 2.2e-08
NP_001316579 (OMIM: 194528) zinc finger protein 25 ( 456) 438 59.4 2.2e-08
NP_001316581 (OMIM: 194528) zinc finger protein 25 ( 456) 438 59.4 2.2e-08
NP_001316576 (OMIM: 194528) zinc finger protein 25 ( 460) 438 59.4 2.2e-08
NP_001316577 (OMIM: 194528) zinc finger protein 25 ( 460) 438 59.4 2.2e-08
XP_011517656 (OMIM: 194528) PREDICTED: zinc finger ( 460) 438 59.4 2.2e-08
NP_001316578 (OMIM: 194528) zinc finger protein 25 ( 460) 438 59.4 2.2e-08
NP_001252529 (OMIM: 601856) zinc finger protein 21 ( 503) 437 59.4 2.5e-08
NP_001252528 (OMIM: 601856) zinc finger protein 21 ( 555) 437 59.5 2.6e-08
NP_001073878 (OMIM: 603981) zinc finger protein 99 ( 864) 440 60.1 2.6e-08
NP_942152 (OMIM: 601856) zinc finger protein 211 i ( 564) 437 59.5 2.6e-08
>>XP_016881947 (OMIM: 613419) PREDICTED: zinc finger and (433 aa)
initn: 2946 init1: 2946 opt: 2946 Z-score: 1659.2 bits: 316.1 E(85289): 1.1e-85
Smith-Waterman score: 2946; 100.0% identity (100.0% similar) in 433 aa overlap (1-433:1-433)
10 20 30 40 50 60
pF1KB7 MALDLRTIFQCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MALDLRTIFQCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELQRLYRIFHSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELQRLYRIFHSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DLTDDSINPPALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLTDDSINPPALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TSLETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSLETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEGNSTCEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEGNSTCEV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 IHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTHEK
370 380 390 400 410 420
430
pF1KB7 ITLPSVPSTPEAS
:::::::::::::
XP_016 ITLPSVPSTPEAS
430
>>XP_011524909 (OMIM: 613419) PREDICTED: zinc finger and (433 aa)
initn: 2946 init1: 2946 opt: 2946 Z-score: 1659.2 bits: 316.1 E(85289): 1.1e-85
Smith-Waterman score: 2946; 100.0% identity (100.0% similar) in 433 aa overlap (1-433:1-433)
10 20 30 40 50 60
pF1KB7 MALDLRTIFQCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALDLRTIFQCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELQRLYRIFHSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELQRLYRIFHSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DLTDDSINPPALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLTDDSINPPALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TSLETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSLETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEGNSTCEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEGNSTCEV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 IHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTHEK
370 380 390 400 410 420
430
pF1KB7 ITLPSVPSTPEAS
:::::::::::::
XP_011 ITLPSVPSTPEAS
430
>>NP_689890 (OMIM: 613419) zinc finger and SCAN domain-c (433 aa)
initn: 2946 init1: 2946 opt: 2946 Z-score: 1659.2 bits: 316.1 E(85289): 1.1e-85
Smith-Waterman score: 2946; 100.0% identity (100.0% similar) in 433 aa overlap (1-433:1-433)
10 20 30 40 50 60
pF1KB7 MALDLRTIFQCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MALDLRTIFQCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELQRLYRIFHSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ELQRLYRIFHSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DLTDDSINPPALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 DLTDDSINPPALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 TSLETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 TSLETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEGNSTCEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEGNSTCEV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 IHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 IHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTHEK
370 380 390 400 410 420
430
pF1KB7 ITLPSVPSTPEAS
:::::::::::::
NP_689 ITLPSVPSTPEAS
430
>>XP_005249152 (OMIM: 611643) PREDICTED: zinc finger pro (545 aa)
initn: 1032 init1: 363 opt: 531 Z-score: 322.3 bits: 69.1 E(85289): 3.3e-11
Smith-Waterman score: 535; 29.9% identity (55.8% similar) in 405 aa overlap (41-418:50-454)
20 30 40 50 60 70
pF1KB7 CEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQELQRLYRIFH
: ::. . .:. . . :. :.:: ..
XP_005 TGLLTVKVEKEEASALTAEVRAPCSPARGPERSRQRFRGFRYPEAAGPREALSRLRELCG
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB7 SWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIEDLTDDSINPP
.::::: :::..:. :::::::. : .. :.:. ::... ..: : . .:
XP_005 QWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEPA
80 90 100 110 120 130
140 150 160 170 180
pF1KB7 ALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQDTSLET---GQ
: : :::: : . : .. ..: . . . . . :: .: :.. .:
XP_005 PQVPVGDQGQELLCCKMALLTQTQGSQSSQCQPMKALFKHESLGSQPLHDRVLQVPGLAQ
140 150 160 170 180 190
190 200 210 220 230
pF1KB7 GYEDEQDGWNSSS---------KTTRVNENITNQGNQI-VSLIIIQEENGPRPEEGGVSS
: ..:. .: : : ..: .:. : . . ... . . . ::
XP_005 GGCCREDAMVASRLTPGSQGLLKMEDVALTLTPGWTQLDSSQVNLYRDEKQENHSSLVSL
200 210 220 230 240 250
240 250 260 270 280
pF1KB7 DNPYNSKRAELVTARS----QEGSINGIT--FQGVPMVMGAGCISQPEQSSPESAL---T
. ..: .: ... ..:.: . . .: :: : . ..:.
XP_005 GGEIQTKSRDLPPVKKLPEKEHGKICHLREDIAQIPTHAEAGEQEGRLQRKQKNAIGSRR
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB7 HQSNE-GNSTCE----VHQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCP
: .: :.: . .... : .: :.::.: :.: :. ::: : .:.:. :
XP_005 HYCHECGKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECE
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB7 ECQKGFFQISDLRVHQIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKT
:: : : . :.: :: :::.::. :. : :.::.. .: :..:::::::: : .:
XP_005 ECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGK
380 390 400 410 420 430
410 420 430
pF1KB7 SYRQSSTYHRHMRTHEKITLPSVPSTPEAS
..:..: ::.: :
XP_005 AFRRNSHLLRHQRIHGDKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRN
440 450 460 470 480 490
>>NP_061983 (OMIM: 611643) zinc finger protein with KRAB (545 aa)
initn: 1032 init1: 363 opt: 531 Z-score: 322.3 bits: 69.1 E(85289): 3.3e-11
Smith-Waterman score: 535; 29.9% identity (55.8% similar) in 405 aa overlap (41-418:50-454)
20 30 40 50 60 70
pF1KB7 CEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQELQRLYRIFH
: ::. . .:. . . :. :.:: ..
NP_061 TGLLTVKVEKEEASALTAEVRAPCSPARGPERSRQRFRGFRYPEAAGPREALSRLRELCG
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB7 SWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIEDLTDDSINPP
.::::: :::..:. :::::::. : .. :.:. ::... ..: : . .:
NP_061 QWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEPA
80 90 100 110 120 130
140 150 160 170 180
pF1KB7 ALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQDTSLET---GQ
: : :::: : . : .. ..: . . . . . :: .: :.. .:
NP_061 PQVPVGDQGQELLCCKMALLTQTQGSQSSQCQPMKALFKHESLGSQPLHDRVLQVPGLAQ
140 150 160 170 180 190
190 200 210 220 230
pF1KB7 GYEDEQDGWNSSS---------KTTRVNENITNQGNQI-VSLIIIQEENGPRPEEGGVSS
: ..:. .: : : ..: .:. : . . ... . . . ::
NP_061 GGCCREDAMVASRLTPGSQGLLKMEDVALTLTPGWTQLDSSQVNLYRDEKQENHSSLVSL
200 210 220 230 240 250
240 250 260 270 280
pF1KB7 DNPYNSKRAELVTARS----QEGSINGIT--FQGVPMVMGAGCISQPEQSSPESAL---T
. ..: .: ... ..:.: . . .: :: : . ..:.
NP_061 GGEIQTKSRDLPPVKKLPEKEHGKICHLREDIAQIPTHAEAGEQEGRLQRKQKNAIGSRR
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB7 HQSNE-GNSTCE----VHQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCP
: .: :.: . .... : .: :.::.: :.: :. ::: : .:.:. :
NP_061 HYCHECGKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECE
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB7 ECQKGFFQISDLRVHQIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKT
:: : : . :.: :: :::.::. :. : :.::.. .: :..:::::::: : .:
NP_061 ECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGK
380 390 400 410 420 430
410 420 430
pF1KB7 SYRQSSTYHRHMRTHEKITLPSVPSTPEAS
..:..: ::.: :
NP_061 AFRRNSHLLRHQRIHGDKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRN
440 450 460 470 480 490
>>XP_006715278 (OMIM: 612791) PREDICTED: zinc finger pro (538 aa)
initn: 617 init1: 472 opt: 524 Z-score: 318.4 bits: 68.3 E(85289): 5.3e-11
Smith-Waterman score: 542; 30.9% identity (56.1% similar) in 408 aa overlap (40-418:42-448)
10 20 30 40 50 60
pF1KB7 QCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQELQRLYRIF
:: :: . .:. . . :. :.:: ..
XP_006 DAQSTEDQMELLVIKVEEEEAGFPSSPDLGSEGSRERFRGFRYPEAAGPREALSRLRELC
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB7 HSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIEDLTDDSINP
..::::: :::..:. :::::::. : .. :.:. ::... ..: : . .:
XP_006 RQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEP
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB7 PALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQDTSLET---G
: :::: : . : . ..: . . . . .. :: :: :.. .
XP_006 APQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGSQPLQDRVLQVPVLA
140 150 160 170 180 190
190 200 210 220 230
pF1KB7 QGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLII--IQEENGP-------RPEEGG--V
.: ..: .:. : .... . . ..: :.... . :. : :
XP_006 HGGCCREDKV-VASRLTPESQGLLKVEDVALTLTPEWTQQDSSQGNLCRDEKQENHGSLV
200 210 220 230 240 250
240 250 260 270 280
pF1KB7 SSDNPYNSKRAELVTAR----SQEGSINGITFQGV---PMVMGAGCIS---QPEQSSPES
: . ..: .: :. ...:.:. . . : :: : .:.. .
XP_006 SLGDEKQTKSRDLPPAEELPEKEHGKISCHLREDIAQIPTCAEAGEQEGRLQRKQKNATG
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB7 ALTHQSNE-GNSTCEV----HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPF
. : .: :.: . ... : .: :.:::: :.: :. ::: : .:.:.
XP_006 GRRHICHECGKSFAQSSGLSKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPY
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB7 VCPECQKGFFQISDLRVHQIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPF
: :: :.: . ::: :: :::.::. :. : :.::.. .: :.::::::::: : .
XP_006 ECEECGKAFSHSSDLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSM
380 390 400 410 420 430
410 420 430
pF1KB7 CKTSYRQSSTYHRHMRTHEKITLPSVPSTPEAS
: ..:.:: ::.: :
XP_006 CGKAFRRSSHLLRHQRIHTGDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECERSFT
440 450 460 470 480 490
>>NP_077819 (OMIM: 612791) zinc finger protein with KRAB (538 aa)
initn: 617 init1: 472 opt: 524 Z-score: 318.4 bits: 68.3 E(85289): 5.3e-11
Smith-Waterman score: 542; 30.9% identity (56.1% similar) in 408 aa overlap (40-418:42-448)
10 20 30 40 50 60
pF1KB7 QCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQELQRLYRIF
:: :: . .:. . . :. :.:: ..
NP_077 DAQSTEDQMELLVIKVEEEEAGFPSSPDLGSEGSRERFRGFRYPEAAGPREALSRLRELC
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB7 HSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIEDLTDDSINP
..::::: :::..:. :::::::. : .. :.:. ::... ..: : . .:
NP_077 RQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEP
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB7 PALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQDTSLET---G
: :::: : . : . ..: . . . . .. :: :: :.. .
NP_077 APQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGSQPLQDRVLQVPVLA
140 150 160 170 180 190
190 200 210 220 230
pF1KB7 QGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLII--IQEENGP-------RPEEGG--V
.: ..: .:. : .... . . ..: :.... . :. : :
NP_077 HGGCCREDKV-VASRLTPESQGLLKVEDVALTLTPEWTQQDSSQGNLCRDEKQENHGSLV
200 210 220 230 240 250
240 250 260 270 280
pF1KB7 SSDNPYNSKRAELVTAR----SQEGSINGITFQGV---PMVMGAGCIS---QPEQSSPES
: . ..: .: :. ...:.:. . . : :: : .:.. .
NP_077 SLGDEKQTKSRDLPPAEELPEKEHGKISCHLREDIAQIPTCAEAGEQEGRLQRKQKNATG
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB7 ALTHQSNE-GNSTCEV----HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPF
. : .: :.: . ... : .: :.:::: :.: :. ::: : .:.:.
NP_077 GRRHICHECGKSFAQSSGLSKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPY
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB7 VCPECQKGFFQISDLRVHQIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPF
: :: :.: . ::: :: :::.::. :. : :.::.. .: :.::::::::: : .
NP_077 ECEECGKAFSHSSDLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSM
380 390 400 410 420 430
410 420 430
pF1KB7 CKTSYRQSSTYHRHMRTHEKITLPSVPSTPEAS
: ..:.:: ::.: :
NP_077 CGKAFRRSSHLLRHQRIHTGDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECERSFT
440 450 460 470 480 490
>>NP_001229823 (OMIM: 612791) zinc finger protein with K (538 aa)
initn: 617 init1: 472 opt: 524 Z-score: 318.4 bits: 68.3 E(85289): 5.3e-11
Smith-Waterman score: 542; 30.9% identity (56.1% similar) in 408 aa overlap (40-418:42-448)
10 20 30 40 50 60
pF1KB7 QCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQELQRLYRIF
:: :: . .:. . . :. :.:: ..
NP_001 DAQSTEDQMELLVIKVEEEEAGFPSSPDLGSEGSRERFRGFRYPEAAGPREALSRLRELC
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB7 HSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIEDLTDDSINP
..::::: :::..:. :::::::. : .. :.:. ::... ..: : . .:
NP_001 RQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEP
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB7 PALVHVHMQGQEALFSEDMPLRDVIVHLTKQVNAQTTREANMGTPSQTSQDTSLET---G
: :::: : . : . ..: . . . . .. :: :: :.. .
NP_001 APQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGSQPLQDRVLQVPVLA
140 150 160 170 180 190
190 200 210 220 230
pF1KB7 QGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLII--IQEENGP-------RPEEGG--V
.: ..: .:. : .... . . ..: :.... . :. : :
NP_001 HGGCCREDKV-VASRLTPESQGLLKVEDVALTLTPEWTQQDSSQGNLCRDEKQENHGSLV
200 210 220 230 240 250
240 250 260 270 280
pF1KB7 SSDNPYNSKRAELVTAR----SQEGSINGITFQGV---PMVMGAGCIS---QPEQSSPES
: . ..: .: :. ...:.:. . . : :: : .:.. .
NP_001 SLGDEKQTKSRDLPPAEELPEKEHGKISCHLREDIAQIPTCAEAGEQEGRLQRKQKNATG
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB7 ALTHQSNE-GNSTCEV----HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPF
. : .: :.: . ... : .: :.:::: :.: :. ::: : .:.:.
NP_001 GRRHICHECGKSFAQSSGLSKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPY
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB7 VCPECQKGFFQISDLRVHQIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPF
: :: :.: . ::: :: :::.::. :. : :.::.. .: :.::::::::: : .
NP_001 ECEECGKAFSHSSDLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSM
380 390 400 410 420 430
410 420 430
pF1KB7 CKTSYRQSSTYHRHMRTHEKITLPSVPSTPEAS
: ..:.:: ::.: :
NP_001 CGKAFRRSSHLLRHQRIHTGDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECERSFT
440 450 460 470 480 490
>>XP_016866809 (OMIM: 612791) PREDICTED: zinc finger pro (509 aa)
initn: 640 init1: 402 opt: 520 Z-score: 316.4 bits: 67.9 E(85289): 6.9e-11
Smith-Waterman score: 520; 29.2% identity (56.9% similar) in 390 aa overlap (40-418:42-419)
10 20 30 40 50 60
pF1KB7 QCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQELQRLYRIF
:: :: . .:. . . :. :.:: ..
XP_016 DAQSTEDQMELLVIKVEEEEAGFPSSPDLGSEGSRERFRGFRYPEAAGPREALSRLRELC
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB7 HSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIEDLTDDSINP
..::::: :::..:. :::::::. : .. : :: . . . ..:
XP_016 RQWLQPEMHSKEQILELLVLEQFLTILPGNLQS-----W-VSGVDQGQELLCCKMALLTP
80 90 100 110 120
130 140 150 160 170 180
pF1KB7 -PALVHVHMQGQEALFSED----MPLRDVIVHLTKQVNAQTTREANMGTPSQTSQDTSL-
:. ..: ..::.... .::.: .... ... :: .. . : .. .:
XP_016 APGSQSSQFQLMKALLKHESVGSQPLQDRVLQVPVLAHGGCCREDKVVASRLTPESQGLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ---ETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
... : .::. . .:. :.: ::. . .:. . .. . . :
XP_016 KVEDVALTLTPEWTQQDSSQGNLCRDEKQENHG----SLVSLGDEKQTKSRDLPPAEELP
190 200 210 220 230 240
250 260 270 280 290
pF1KB7 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEG--NSTC
:. .. . .: . : . : .: . .. . . :. ... .:.
XP_016 --EKEHGKISCHLREDIAQIPTCAEAGEQEGRLQRKQKNATGGRRHICHECGKSFAQSSG
250 260 270 280 290
300 310 320 330 340 350
pF1KB7 EVHQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVH
... : .: :.:::: :.: :. ::: : .:.:. : :: :.: . ::: :
XP_016 LSKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB7 QIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTH
: :::.::. :. : :.::.. .: :.::::::::: : .: ..:.:: ::.: :
XP_016 QRTHTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIH
360 370 380 390 400 410
420 430
pF1KB7 EKITLPSVPSTPEAS
XP_016 TGDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPY
420 430 440 450 460 470
>>XP_006715279 (OMIM: 612791) PREDICTED: zinc finger pro (509 aa)
initn: 640 init1: 402 opt: 520 Z-score: 316.4 bits: 67.9 E(85289): 6.9e-11
Smith-Waterman score: 520; 29.2% identity (56.9% similar) in 390 aa overlap (40-418:42-419)
10 20 30 40 50 60
pF1KB7 QCEPSENNLGSENSAFQQSQGPAVQREEGISEFSRMVLNSFQDSNNSYARQELQRLYRIF
:: :: . .:. . . :. :.:: ..
XP_006 DAQSTEDQMELLVIKVEEEEAGFPSSPDLGSEGSRERFRGFRYPEAAGPREALSRLRELC
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB7 HSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKASVKEKWKSSGKNLERFIEDLTDDSINP
..::::: :::..:. :::::::. : .. : :: . . . ..:
XP_006 RQWLQPEMHSKEQILELLVLEQFLTILPGNLQS-----W-VSGVDQGQELLCCKMALLTP
80 90 100 110 120
130 140 150 160 170 180
pF1KB7 -PALVHVHMQGQEALFSED----MPLRDVIVHLTKQVNAQTTREANMGTPSQTSQDTSL-
:. ..: ..::.... .::.: .... ... :: .. . : .. .:
XP_006 APGSQSSQFQLMKALLKHESVGSQPLQDRVLQVPVLAHGGCCREDKVVASRLTPESQGLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ---ETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVSLIIIQEENGPRPEEGGVSSDNP
... : .::. . .:. :.: ::. . .:. . .. . . :
XP_006 KVEDVALTLTPEWTQQDSSQGNLCRDEKQENHG----SLVSLGDEKQTKSRDLPPAEELP
190 200 210 220 230 240
250 260 270 280 290
pF1KB7 YNSKRAELVTARSQEGSINGITFQGVPMVMGAGCISQPEQSSPESALTHQSNEG--NSTC
:. .. . .: . : . : .: . .. . . :. ... .:.
XP_006 --EKEHGKISCHLREDIAQIPTCAEAGEQEGRLQRKQKNATGGRRHICHECGKSFAQSSG
250 260 270 280 290
300 310 320 330 340 350
pF1KB7 EVHQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVH
... : .: :.:::: :.: :. ::: : .:.:. : :: :.: . ::: :
XP_006 LSKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB7 QIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTGEKPYTCPFCKTSYRQSSTYHRHMRTH
: :::.::. :. : :.::.. .: :.::::::::: : .: ..:.:: ::.: :
XP_006 QRTHTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIH
360 370 380 390 400 410
420 430
pF1KB7 EKITLPSVPSTPEAS
XP_006 TGDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPY
420 430 440 450 460 470
433 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:12:30 2016 done: Sun Nov 6 13:12:31 2016
Total Scan time: 9.330 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]