FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4027, 236 aa 1>>>pF1KE4027 236 - 236 aa - 236 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0238+/-0.000883; mu= 12.0605+/- 0.053 mean_var=110.0584+/-23.262, 0's: 0 Z-trim(109.5): 68 B-trim: 0 in 0/51 Lambda= 0.122254 statistics sampled from 10904 (10966) to 10904 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.337), width: 16 Scan time: 2.230 The best scores are: opt bits E(32554) CCDS12863.1 BIRC8 gene_id:112401|Hs108|chr19 ( 236) 1619 295.8 1.7e-80 CCDS14606.1 XIAP gene_id:331|Hs108|chrX ( 497) 1358 250.0 2.1e-66 CCDS8315.1 BIRC3 gene_id:330|Hs108|chr11 ( 604) 320 67.0 3.1e-11 CCDS13512.1 BIRC7 gene_id:79444|Hs108|chr20 ( 280) 309 64.8 6.7e-11 CCDS13513.1 BIRC7 gene_id:79444|Hs108|chr20 ( 298) 309 64.8 7e-11 >>CCDS12863.1 BIRC8 gene_id:112401|Hs108|chr19 (236 aa) initn: 1619 init1: 1619 opt: 1619 Z-score: 1558.9 bits: 295.8 E(32554): 1.7e-80 Smith-Waterman score: 1619; 100.0% identity (100.0% similar) in 236 aa overlap (1-236:1-236) 10 20 30 40 50 60 pF1KE4 MTGYEARLITFGTWMYSVNKEQLARAGFYAIGQEDKVQCFHCGGGLANWKPKEDPWEQHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MTGYEARLITFGTWMYSVNKEQLARAGFYAIGQEDKVQCFHCGGGLANWKPKEDPWEQHA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KWYPGCKYLLEEKGHEYINNIHLTRSLEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 KWYPGCKYLLEEKGHEYINNIHLTRSLEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 MGFDFKDVKKIMEERIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MGFDFKDVKKIMEERIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPL 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 RRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 RRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS 190 200 210 220 230 >>CCDS14606.1 XIAP gene_id:331|Hs108|chrX (497 aa) initn: 1358 init1: 1358 opt: 1358 Z-score: 1305.8 bits: 250.0 E(32554): 2.1e-66 Smith-Waterman score: 1358; 80.1% identity (94.9% similar) in 236 aa overlap (1-236:262-497) 10 20 30 pF1KE4 MTGYEARLITFGTWMYSVNKEQLARAGFYA :. ::::..:::::.::::::::::::::: CCDS14 GRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYA 240 250 260 270 280 290 40 50 60 70 80 90 pF1KE4 IGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGA .:. :::.::::::::..:::.:::::::::::::::::::.::.:::::::::.::: CCDS14 LGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEEC 300 310 320 330 340 350 100 110 120 130 140 150 pF1KE4 LVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLV ::.::.::::::.::.:::: :::.::::::::.:::.::::::.:: ::::::.::::: CCDS14 LVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLV 360 370 380 390 400 410 160 170 180 190 200 210 pF1KE4 ADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTC ::::.::::. ..: .:::::.::: :: ::::::::::::::::.::.::.:::::::: CCDS14 ADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC 420 430 440 450 460 470 220 230 pF1KE4 KQCAEAVDRCPMCSAVIDFKQRVFMS ::::::::.:::: .:: :::..::: CCDS14 KQCAEAVDKCPMCYTVITFKQKIFMS 480 490 >>CCDS8315.1 BIRC3 gene_id:330|Hs108|chr11 (604 aa) initn: 646 init1: 295 opt: 320 Z-score: 315.2 bits: 67.0 E(32554): 3.1e-11 Smith-Waterman score: 412; 36.0% identity (65.1% similar) in 189 aa overlap (1-173:252-440) 10 20 pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGF : . ::. :: .: :: : :::: ::: CCDS83 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF 230 240 250 260 270 280 30 40 50 60 70 80 pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNI-----HL : .:. : :.:: : ::: :. .::: :::::.: :.::.. ::.:.: .. :: CCDS83 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL 290 300 310 320 330 340 90 100 110 120 130 pF1KE4 TRSL---------EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEE ..: :.: . . :. . . .. .:... :..:::. . ::. ... CCDS83 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR 350 360 370 380 390 400 140 150 160 170 180 190 pF1KE4 RIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMD .: ..: ::. .. :: ::..:. . :.: .... ..: CCDS83 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV 410 420 430 440 450 460 200 210 220 230 pF1KE4 RHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS CCDS83 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL 470 480 490 500 510 520 >>CCDS13512.1 BIRC7 gene_id:79444|Hs108|chr20 (280 aa) initn: 488 init1: 280 opt: 309 Z-score: 309.2 bits: 64.8 E(32554): 6.7e-11 Smith-Waterman score: 480; 34.7% identity (57.7% similar) in 239 aa overlap (1-236:84-280) 10 20 pF1KE4 MTGYEARLITFGTWMYS--VNKEQLARAGF : . : :: .: : . : : :: ::: CCDS13 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF 60 70 80 90 100 110 30 40 50 60 70 80 pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRS-L . :..:::.:: : ::: .:: .::: .::::.:.:..::. ::........ :.: : CCDS13 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL 120 130 140 150 160 170 90 100 110 120 130 140 pF1KE4 EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLE :. : . .: .:. . . .:: : : CCDS13 LGSW------DP----------WEEP------------EDAAPVAPS-VPASG--YPELP 180 190 200 150 160 170 180 190 200 pF1KE4 VLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHL . . ...: : :.. : :::::::. ::.:.:: ...::.::::: CCDS13 T--------PRREVQSESAQEPGARDV--EAQLRRLQEERTCKVCLDRAVSIVFVPCGHL 210 220 230 240 250 210 220 230 pF1KE4 VTCKQCAEAVDRCPMCSAVIDFKQRVFMS : : .:: ... ::.: : . . :.:.: CCDS13 V-CAECAPGLQLCPICRAPVRSRVRTFLS 260 270 280 >>CCDS13513.1 BIRC7 gene_id:79444|Hs108|chr20 (298 aa) initn: 494 init1: 286 opt: 309 Z-score: 308.8 bits: 64.8 E(32554): 7e-11 Smith-Waterman score: 498; 34.3% identity (58.2% similar) in 239 aa overlap (1-236:84-298) 10 20 pF1KE4 MTGYEARLITFGTWMYS--VNKEQLARAGF : . : :: .: : . : : :: ::: CCDS13 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF 60 70 80 90 100 110 30 40 50 60 70 80 pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRS-L . :..:::.:: : ::: .:: .::: .::::.:.:..::. ::........ :.: : CCDS13 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL 120 130 140 150 160 170 90 100 110 120 130 140 pF1KE4 EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLE :. . : . .. .. : : .... : : :. CCDS13 LGS--WDPWEEPEDAAPVAPSV-PASGYPELP------TPRREVQSESAQEPGG------ 180 190 200 210 150 160 170 180 190 200 pF1KE4 VLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHL :: . . . :.. : :::::::. ::.:.:: ...::.::::: CCDS13 ------VSPAEAQRAWWVLEPPGARDV--EAQLRRLQEERTCKVCLDRAVSIVFVPCGHL 220 230 240 250 260 270 210 220 230 pF1KE4 VTCKQCAEAVDRCPMCSAVIDFKQRVFMS : : .:: ... ::.: : . . :.:.: CCDS13 V-CAECAPGLQLCPICRAPVRSRVRTFLS 280 290 236 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:41:00 2016 done: Sun Nov 6 03:41:00 2016 Total Scan time: 2.230 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]