################################## # NO CUT ENZYMES ( 140 enzymes) # ################################## AatII Acc65I AccI AccIII AclI AcyI AflII AflIII AhdI Alw44I AocI Aor51HI ApaI ApaLI AscI AseI AsnI Asp700I Asp718I AspEI AspI AvaI AviII BalI BamHI BbeI BbrPI BbvCI BcnI BfrI BglI BglII BlpI Bpu1102I BsaAI BsaHI BseAI BseRI BsiEI BsiWI BsmBI BsoBI BspDI BspEI BspLU11I BsrBI BssHII BssSI Bst1107I BstBI BstEII BstPI BstZ17I Bsu36I CelII ClaI CpoI DraI DraII EaeI EagI Eam1105I EclXI Eco47III Eco52I Eco81I EcoNI EcoO109I EcoO65I EcoRI EcoRV EcoT22I FauI FseI FspI HaeII Hin1I HincII HindII HindIII HpaI KasI KpnI KspI MfeI MluI MluNI MroI MscI MseI MslI MunI NaeI NarI NciI NdeI NgoMIV NheI NotI NruI NsiI NspV PacI PaeR7I PflFI PmaCI PmeI PmlI PpuMI PshAI PshBI Psp1406I PvuI RsrII SacI SacII SalI SapI SbfI ScaI SexAI SfiI SfoI SfuI SgrAI SmaI SnaBI SpeI SphI Sse8387I SspI StuI SwaI Tru9I Tth111I XbaI XhoI XmaCI XmaI XmnI ################################### # ONE CUT ENZYMES ( 52 enzymes) # ################################### AccII 145 CGCG CG^CG AciI 144 CCGC CCGC(-3/-1) AgeI 136 ACCGGT A^CCGGT AspHI 963 GAGCAC G[AT]GC[AT]^C AvrII 577 CCTAGG C^CTAGG BanI 386 GGCACC G^G[CT][GA]CC BanII 823 GGGCTC G[GA]GC[CT]^C BbsI 553 GTCTTC GAAGAC(2/6) BcgI 842 GCAGCTCCATCG (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BclI 563 TGATCA T^GATCA BlnI 577 CCTAGG C^CTAGG BpmI 585 CTCCAG CTGGAG(16/14) BpuAI 553 GTCTTC GAAGAC(2/6) BsaBI 564 GATCACCATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC BsaWI 136 ACCGGT [AT]^CCGG[AT] BsiHKAI 963 GAGCAC G[AT]GC[AT]^C BsmFI 163 GTCCC GGGAC(10/14) BsmI 121 GCATTC GAATGC(1/-1) Bsp1407I 863 TGTACA T^GTACA BspHI 1167 TCATGA T^CATGA BsrDI 1065 CATTGC GCAATG(2/0) BsrFI 136 ACCGGT [GA]^CCGG[CT] BsrGI 863 TGTACA T^GTACA BstAPI 1133 GCAGTATCTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC BstUI 145 CGCG CG^CG Cac8I 838 GCCAGC GC[ACGT]^[ACGT]GC CfoI 53 GCGC GCG^C Cfr10I 136 ACCGGT [GA]^CCGG[CT] DraIII 755 CACTTAGTG CAC[ACGT][ACGT][ACGT]^GTG DrdI 171 GACACAGCTGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC DsaI 440 CCATGG C^C[GA][CT]GG FbaI 563 TGATCA T^GATCA HapII 137 CCGG C^CGG HgaI 146 GCGTC GACGC(5/10) HhaI 53 GCGC GCG^C HinP1I 53 GCGC G^CGC HpaII 137 CCGG C^CGG MaeII 1004 ACGT A^CGT MamI 564 GATCACCATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC MnlI 543 CCTC CCTC(7/6) MspA1I 175 CAGCTG C[AC]G^C[GT]G MspI 137 CCGG C^CGG MvnI 145 CGCG CG^CG NcoI 440 CCATGG C^CATGG NspI 659 ACATGC [GA]CATG^[CT] PinAI 136 ACCGGT A^CCGGT PvuII 175 CAGCTG CAG^CTG RcaI 1167 TCATGA T^CATGA SmlI 546 CTTGAG C^T[CT][GA]AG SspBI 863 TGTACA T^GTACA TaqI 1022 TCGA T^CGA TthHB8I 1022 TCGA T^CGA ################################### # TWO CUT ENZYMES ( 27 enzymes) # ################################### AcsI 309 GAATTT [GA]^AATT[CT] 487 AAATTT AfaI 864 GTAC GT^AC 883 GTAC AlwI 365 GATCC GGATC(4/5) 1121 GATCC AlwNI 1125 CAGGCTCTG CAG[ACGT][ACGT][ACGT]^CTG 1134 CAGTATCTG ApoI 309 GAATTT [GA]^AATT[CT] 487 AAATTT AvaII 162 GGTCC G^G[AT]CC 270 GGACC BfaI 578 CTAG C^TAG 1042 CTAG BmyI 823 GGGCTC G[AGT]GC[ACT]^C 963 GAGCAC Bsp1286I 823 GGGCTC G[AGT]GC[ACT]^C 963 GAGCAC BspMI 538 ACCTGC ACCTGC(4/8) 879 GCAGGT BstXI 254 CCAAACCTGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 848 CCATCGTTTTGG BstYI 364 AGATCC [GA]^GATC[CT] 1120 AGATCC DdeI 382 CTCAG C^T[ACGT]AG 757 CTTAG EarI 918 CTCTTC CTCTTC(1/4) 1018 CTCTTC Ksp632I 918 CTCTTC CTCTTC(1/4) 1018 CTCTTC MaeI 578 CTAG C^TAG 1042 CTAG MflI 364 AGATCC [GA]^GATC[CT] 1120 AGATCC PflMI 657 CCACATGCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1031 CCAGTTGGTGG PleI 3 GACTC GAGTC(4/5) 403 GACTC PstI 1131 CTGCAG CTGCA^G 1143 CTGCAG RsaI 864 GTAC GT^AC 883 GTAC SfaNI 482 GATGC GCATC(5/9) 947 GCATC Tsp45I 769 GTCAC ^GT[GC]AC 1109 GTGAC TspRI 109 CAGTG CA[GC]TG[ACGT][ACGT]^ 1050 CACTG Van91I 657 CCACATGCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1031 CCAGTTGGTGG XcmI 251 CCACCAAACCTGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG 285 CCAGGTAGTTGTTGG XhoII 364 AGATCC [GA]^GATC[CT] 1120 AGATCC ######################################### # 3 OR MORE CUT ENZYMES ( 39 enzymes) # ######################################### AluI BbvI BciVI BsaI BsaJI BsgI BsiYI BslI BsmAI BsrI BssKI BstF5I BstNI Cfr13I DpnII EcoRII EcoT14I Fnu4HI FokI HaeIII HinfI HphI ItaI MaeIII MboI MboII MvaI MwoI NdeII NlaIII NlaIV Sau3AI Sau96I ScrFI SfcI StyI TfiI TseI Tsp509I