FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1820, 334 aa 1>>>pF1KE1820 334 - 334 aa - 334 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3879+/-0.000252; mu= 8.7661+/- 0.016 mean_var=146.2351+/-30.100, 0's: 0 Z-trim(125.2): 18 B-trim: 3040 in 2/55 Lambda= 0.106059 statistics sampled from 48547 (48570) to 48547 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.843), E-opt: 0.2 (0.569), width: 16 Scan time: 10.040 The best scores are: opt bits E(85289) NP_619580 (OMIM: 610837) bcl-2-like protein 12 iso ( 334) 2341 368.7 9.7e-102 NP_001035758 (OMIM: 610837) bcl-2-like protein 12 ( 333) 2322 365.8 7.3e-101 NP_001269445 (OMIM: 610837) bcl-2-like protein 12 ( 243) 1616 257.7 1.9e-68 NP_001269448 (OMIM: 610837) bcl-2-like protein 12 ( 269) 1615 257.5 2.3e-68 XP_016882834 (OMIM: 610837) PREDICTED: bcl-2-like ( 242) 1597 254.8 1.4e-67 NP_001269449 (OMIM: 610837) bcl-2-like protein 12 ( 222) 1427 228.7 8.9e-60 NP_001269450 (OMIM: 610837) bcl-2-like protein 12 ( 193) 1240 200.1 3.3e-51 XP_016882835 (OMIM: 610837) PREDICTED: bcl-2-like ( 176) 884 145.6 7.6e-35 NP_001269446 (OMIM: 610837) bcl-2-like protein 12 ( 176) 884 145.6 7.6e-35 >>NP_619580 (OMIM: 610837) bcl-2-like protein 12 isoform (334 aa) initn: 2341 init1: 2341 opt: 2341 Z-score: 1947.5 bits: 368.7 E(85289): 9.7e-102 Smith-Waterman score: 2341; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 250 260 270 280 290 300 310 320 330 pF1KE1 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD :::::::::::::::::::::::::::::::::: NP_619 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 310 320 330 >>NP_001035758 (OMIM: 610837) bcl-2-like protein 12 isof (333 aa) initn: 1464 init1: 1464 opt: 2322 Z-score: 1931.8 bits: 365.8 E(85289): 7.3e-101 Smith-Waterman score: 2322; 99.7% identity (99.7% similar) in 334 aa overlap (1-334:1-333) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 240 250 260 270 280 290 310 320 330 pF1KE1 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD :::::::::::::::::::::::::::::::::: NP_001 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 300 310 320 330 >>NP_001269445 (OMIM: 610837) bcl-2-like protein 12 isof (243 aa) initn: 1702 init1: 1614 opt: 1616 Z-score: 1349.9 bits: 257.7 E(85289): 1.9e-68 Smith-Waterman score: 1616; 97.9% identity (98.3% similar) in 235 aa overlap (1-232:1-235) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQK---LASDPALRSK ::::::::::::::::::::::::::::::::::::::::::::::: :: .: NP_001 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKEGILAVSPVDLNL 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 LVRLSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTL NP_001 PLD >>NP_001269448 (OMIM: 610837) bcl-2-like protein 12 isof (269 aa) initn: 1664 init1: 1615 opt: 1615 Z-score: 1348.5 bits: 257.5 E(85289): 2.3e-68 Smith-Waterman score: 1615; 99.6% identity (100.0% similar) in 228 aa overlap (1-228:1-228) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR :::::::::::::::::::::::::::::::::::::::::::::::. NP_001 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKVMGICPTPWQGQE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL NP_001 LRNGGHPGCFTRGLELAIGLSSFSEAATR 250 260 >>XP_016882834 (OMIM: 610837) PREDICTED: bcl-2-like prot (242 aa) initn: 1053 init1: 881 opt: 1597 Z-score: 1334.2 bits: 254.8 E(85289): 1.4e-67 Smith-Waterman score: 1597; 97.4% identity (97.9% similar) in 235 aa overlap (1-232:1-234) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQK---LASDPALRSK ::::::::::::::::::::::::::::::::::::::::::::::: :: .: XP_016 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKEGILAVSPVDLNL 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 LVRLSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTL XP_016 PLD 240 >>NP_001269449 (OMIM: 610837) bcl-2-like protein 12 isof (222 aa) initn: 1427 init1: 1427 opt: 1427 Z-score: 1194.2 bits: 228.7 E(85289): 8.9e-60 Smith-Waterman score: 1427; 100.0% identity (100.0% similar) in 196 aa overlap (1-196:1-196) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR :::::::::::::::: NP_001 RLEQLVQEQLKSPPSPGGHPGCFTRGLELAIGLSSFSEAATR 190 200 210 220 >>NP_001269450 (OMIM: 610837) bcl-2-like protein 12 isof (193 aa) initn: 1240 init1: 1240 opt: 1240 Z-score: 1040.4 bits: 200.1 E(85289): 3.3e-51 Smith-Waterman score: 1240; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGGHPGCFTRGLEL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR NP_001 AIGLSSFSEAATR 190 >>XP_016882835 (OMIM: 610837) PREDICTED: bcl-2-like prot (176 aa) initn: 884 init1: 884 opt: 884 Z-score: 746.6 bits: 145.6 E(85289): 7.6e-35 Smith-Waterman score: 894; 81.4% identity (85.1% similar) in 161 aa overlap (1-161:1-148) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :. ::: : .: :: . .:: . .: XP_016 ------PS--YSRLL----C-FGGPAAGTAGPRAAEISAQPRITGSPIDREGSHTAEAGG 130 140 150 160 190 200 210 220 230 240 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR XP_016 PAGGGGRSH 170 >>NP_001269446 (OMIM: 610837) bcl-2-like protein 12 isof (176 aa) initn: 884 init1: 884 opt: 884 Z-score: 746.6 bits: 145.6 E(85289): 7.6e-35 Smith-Waterman score: 894; 81.4% identity (85.1% similar) in 161 aa overlap (1-161:1-148) 10 20 30 40 50 60 pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ :. ::: : .: :: . .:: . .: NP_001 ------PS--YSRLL----C-FGGPAAGTAGPRAAEISAQPRITGSPIDREGSHTAEAGG 130 140 150 160 190 200 210 220 230 240 pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR NP_001 PAGGGGRSH 170 334 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:16:39 2016 done: Sun Nov 6 13:16:40 2016 Total Scan time: 10.040 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]