FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1725, 235 aa 1>>>pF1KE1725 235 - 235 aa - 235 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6605+/-0.000254; mu= 9.7805+/- 0.016 mean_var=118.5911+/-23.456, 0's: 0 Z-trim(124.0): 20 B-trim: 0 in 0/56 Lambda= 0.117774 statistics sampled from 44940 (44961) to 44940 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.832), E-opt: 0.2 (0.527), width: 16 Scan time: 8.310 The best scores are: opt bits E(85289) NP_001191432 (OMIM: 600007) fms-related tyrosine k ( 235) 1613 283.7 1.8e-76 NP_001191431 (OMIM: 600007) fms-related tyrosine k ( 235) 1613 283.7 1.8e-76 NP_001450 (OMIM: 600007) fms-related tyrosine kina ( 235) 1613 283.7 1.8e-76 XP_011524978 (OMIM: 600007) PREDICTED: fms-related ( 245) 1133 202.2 6.7e-52 XP_011524977 (OMIM: 600007) PREDICTED: fms-related ( 245) 1133 202.2 6.7e-52 XP_011524979 (OMIM: 600007) PREDICTED: fms-related ( 186) 1115 199.0 4.5e-51 NP_001265566 (OMIM: 600007) fms-related tyrosine k ( 153) 1066 190.7 1.2e-48 NP_001265567 (OMIM: 600007) fms-related tyrosine k ( 153) 1066 190.7 1.2e-48 XP_011524984 (OMIM: 600007) PREDICTED: fms-related ( 153) 1066 190.7 1.2e-48 XP_016882023 (OMIM: 600007) PREDICTED: fms-related ( 208) 824 149.6 3.8e-36 XP_016882022 (OMIM: 600007) PREDICTED: fms-related ( 208) 824 149.6 3.8e-36 XP_006723179 (OMIM: 600007) PREDICTED: fms-related ( 196) 772 140.8 1.6e-33 XP_016882021 (OMIM: 600007) PREDICTED: fms-related ( 196) 772 140.8 1.6e-33 XP_005258740 (OMIM: 600007) PREDICTED: fms-related ( 200) 772 140.8 1.7e-33 XP_005258739 (OMIM: 600007) PREDICTED: fms-related ( 217) 772 140.8 1.8e-33 XP_005258738 (OMIM: 600007) PREDICTED: fms-related ( 217) 757 138.3 1e-32 XP_005258737 (OMIM: 600007) PREDICTED: fms-related ( 217) 757 138.3 1e-32 XP_011524980 (OMIM: 600007) PREDICTED: fms-related ( 227) 756 138.1 1.2e-32 XP_011524982 (OMIM: 600007) PREDICTED: fms-related ( 130) 752 137.3 1.3e-32 XP_016882024 (OMIM: 600007) PREDICTED: fms-related ( 135) 743 135.7 3.7e-32 >>NP_001191432 (OMIM: 600007) fms-related tyrosine kinas (235 aa) initn: 1613 init1: 1613 opt: 1613 Z-score: 1493.8 bits: 283.7 E(85289): 1.8e-76 Smith-Waterman score: 1613; 100.0% identity (100.0% similar) in 235 aa overlap (1-235:1-235) 10 20 30 40 50 60 pF1KE1 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH 190 200 210 220 230 >>NP_001191431 (OMIM: 600007) fms-related tyrosine kinas (235 aa) initn: 1613 init1: 1613 opt: 1613 Z-score: 1493.8 bits: 283.7 E(85289): 1.8e-76 Smith-Waterman score: 1613; 100.0% identity (100.0% similar) in 235 aa overlap (1-235:1-235) 10 20 30 40 50 60 pF1KE1 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH 190 200 210 220 230 >>NP_001450 (OMIM: 600007) fms-related tyrosine kinase 3 (235 aa) initn: 1613 init1: 1613 opt: 1613 Z-score: 1493.8 bits: 283.7 E(85289): 1.8e-76 Smith-Waterman score: 1613; 100.0% identity (100.0% similar) in 235 aa overlap (1-235:1-235) 10 20 30 40 50 60 pF1KE1 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH 190 200 210 220 230 >>XP_011524978 (OMIM: 600007) PREDICTED: fms-related tyr (245 aa) initn: 1075 init1: 1075 opt: 1133 Z-score: 1052.8 bits: 202.2 E(85289): 6.7e-52 Smith-Waterman score: 1133; 78.1% identity (81.6% similar) in 228 aa overlap (1-228:1-223) 10 20 30 40 50 60 pF1KE1 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT :::::::::::::::::::::::::::::::::::::::: . : : :: : : : XP_011 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPGA---PRPQSPGPAACGALT 130 140 150 160 170 190 200 210 220 230 pF1KE1 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH :.: : : :. : . . : .: .:::. XP_011 WPRPHPGEDTEAHRGES--PARGCIAWTQRKLARGRSLPWAPLIPSPEWRQRQNPAPAPF 180 190 200 210 220 230 XP_011 TQLCTKPLSP 240 >>XP_011524977 (OMIM: 600007) PREDICTED: fms-related tyr (245 aa) initn: 1075 init1: 1075 opt: 1133 Z-score: 1052.8 bits: 202.2 E(85289): 6.7e-52 Smith-Waterman score: 1133; 78.1% identity (81.6% similar) in 228 aa overlap (1-228:1-223) 10 20 30 40 50 60 pF1KE1 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT :::::::::::::::::::::::::::::::::::::::: . : : :: : : : XP_011 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPGA---PRPQSPGPAACGALT 130 140 150 160 170 190 200 210 220 230 pF1KE1 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH :.: : : :. : . . : .: .:::. XP_011 WPRPHPGEDTEAHRGES--PARGCIAWTQRKLARGRSLPWAPLIPSPEWRQRQNPAPAPF 180 190 200 210 220 230 XP_011 TQLCTKPLSP 240 >>XP_011524979 (OMIM: 600007) PREDICTED: fms-related tyr (186 aa) initn: 1075 init1: 1075 opt: 1115 Z-score: 1037.9 bits: 199.0 E(85289): 4.5e-51 Smith-Waterman score: 1115; 91.8% identity (92.9% similar) in 184 aa overlap (1-184:1-181) 10 20 30 40 50 60 pF1KE1 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPT :::::::::::::::::::::::::::::::::::::::: . : : :: : : : XP_011 RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPGA---PRPQSPGPAACGALT 130 140 150 160 170 190 200 210 220 230 pF1KE1 APQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH :.: XP_011 WPRPHPAEP 180 >>NP_001265566 (OMIM: 600007) fms-related tyrosine kinas (153 aa) initn: 1066 init1: 1066 opt: 1066 Z-score: 994.1 bits: 190.7 E(85289): 1.2e-48 Smith-Waterman score: 1066; 100.0% identity (100.0% similar) in 153 aa overlap (83-235:1-153) 60 70 80 90 100 110 pF1KE1 LQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCA :::::::::::::::::::::::::::::: NP_001 MERLKTVAGSKMQGLLERVNTEIHFVTKCA 10 20 30 120 130 140 150 160 170 pF1KE1 FQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPR 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE1 PLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLL 100 110 120 130 140 150 pF1KE1 VEH ::: NP_001 VEH >>NP_001265567 (OMIM: 600007) fms-related tyrosine kinas (153 aa) initn: 1066 init1: 1066 opt: 1066 Z-score: 994.1 bits: 190.7 E(85289): 1.2e-48 Smith-Waterman score: 1066; 100.0% identity (100.0% similar) in 153 aa overlap (83-235:1-153) 60 70 80 90 100 110 pF1KE1 LQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCA :::::::::::::::::::::::::::::: NP_001 MERLKTVAGSKMQGLLERVNTEIHFVTKCA 10 20 30 120 130 140 150 160 170 pF1KE1 FQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPR 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE1 PLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLL 100 110 120 130 140 150 pF1KE1 VEH ::: NP_001 VEH >>XP_011524984 (OMIM: 600007) PREDICTED: fms-related tyr (153 aa) initn: 1066 init1: 1066 opt: 1066 Z-score: 994.1 bits: 190.7 E(85289): 1.2e-48 Smith-Waterman score: 1066; 100.0% identity (100.0% similar) in 153 aa overlap (83-235:1-153) 60 70 80 90 100 110 pF1KE1 LQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCA :::::::::::::::::::::::::::::: XP_011 MERLKTVAGSKMQGLLERVNTEIHFVTKCA 10 20 30 120 130 140 150 160 170 pF1KE1 FQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPR 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE1 PLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLL 100 110 120 130 140 150 pF1KE1 VEH ::: XP_011 VEH >>XP_016882023 (OMIM: 600007) PREDICTED: fms-related tyr (208 aa) initn: 766 init1: 766 opt: 824 Z-score: 770.0 bits: 149.6 E(85289): 3.8e-36 Smith-Waterman score: 824; 72.2% identity (76.7% similar) in 180 aa overlap (49-228:12-186) 20 30 40 50 60 70 pF1KE1 LLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVL :::::::::::::::::::::::::::::: XP_016 MTVLAPAWSPTSDYLLQDYPVTVASNLQDEELCGGLWRLVL 10 20 30 40 80 90 100 110 120 130 pF1KE1 AQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQL 50 60 70 80 90 100 140 150 160 170 180 190 pF1KE1 VALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLL :::::::::::::::::::::: . : : :: : : : :.: : XP_016 VALKPWITRQNFSRCLELQCQPGA---PRPQSPGPAACGALTWPRPHPGEDTEAHRGES- 110 120 130 140 150 200 210 220 230 pF1KE1 LAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH : :. : . . : .: .:::. XP_016 -PARGCIAWTQRKLARGRSLPWAPLIPSPEWRQRQNPAPAPFTQLCTKPLSP 160 170 180 190 200 235 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:57:59 2016 done: Mon Nov 7 22:58:00 2016 Total Scan time: 8.310 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]