FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6640, 226 aa 1>>>pF1KE6640 226 - 226 aa - 226 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1559+/-0.000603; mu= 14.9556+/- 0.036 mean_var=76.5059+/-15.254, 0's: 0 Z-trim(112.9): 49 B-trim: 4 in 2/50 Lambda= 0.146631 statistics sampled from 13541 (13586) to 13541 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.417), width: 16 Scan time: 2.290 The best scores are: opt bits E(32554) CCDS12589.1 CD79A gene_id:973|Hs108|chr19 ( 226) 1589 344.8 2.7e-95 CCDS46088.1 CD79A gene_id:973|Hs108|chr19 ( 188) 685 153.5 8.6e-38 >>CCDS12589.1 CD79A gene_id:973|Hs108|chr19 (226 aa) initn: 1589 init1: 1589 opt: 1589 Z-score: 1824.4 bits: 344.8 E(32554): 2.7e-95 Smith-Waterman score: 1589; 100.0% identity (100.0% similar) in 226 aa overlap (1-226:1-226) 10 20 30 40 50 60 pF1KE6 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 130 140 150 160 170 180 190 200 210 220 pF1KE6 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP :::::::::::::::::::::::::::::::::::::::::::::: CCDS12 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 190 200 210 220 >>CCDS46088.1 CD79A gene_id:973|Hs108|chr19 (188 aa) initn: 1312 init1: 679 opt: 685 Z-score: 792.0 bits: 153.5 E(32554): 8.6e-38 Smith-Waterman score: 1240; 82.7% identity (83.2% similar) in 226 aa overlap (1-226:1-188) 10 20 30 40 50 60 pF1KE6 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG :::::::::::::::::::::::::::: CCDS46 NANVTWWRVLHGNYTWPPEFLGPGEDPN-------------------------------- 70 80 130 140 150 160 170 180 pF1KE6 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD .::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ------EPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 90 100 110 120 130 140 190 200 210 220 pF1KE6 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP :::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 150 160 170 180 226 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:01:25 2016 done: Tue Nov 8 15:01:25 2016 Total Scan time: 2.290 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]