FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2609, 265 aa 1>>>pF1KE2609 265 - 265 aa - 265 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3253+/-0.000441; mu= 9.4419+/- 0.027 mean_var=145.6622+/-30.732, 0's: 0 Z-trim(113.6): 198 B-trim: 649 in 1/56 Lambda= 0.106268 statistics sampled from 22814 (23082) to 22814 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.271), width: 16 Scan time: 4.310 The best scores are: opt bits E(85289) XP_011525508 (OMIM: 109770) PREDICTED: carcinoembr ( 351) 1111 182.4 9.7e-46 NP_001171745 (OMIM: 109770) carcinoembryonic antig ( 368) 1111 182.4 1e-45 NP_001171742 (OMIM: 109770) carcinoembryonic antig ( 430) 1111 182.5 1.1e-45 NP_001171744 (OMIM: 109770) carcinoembryonic antig ( 461) 1111 182.6 1.2e-45 NP_001020083 (OMIM: 109770) carcinoembryonic antig ( 464) 1111 182.6 1.2e-45 NP_001192273 (OMIM: 109770) carcinoembryonic antig ( 468) 1111 182.6 1.2e-45 NP_001703 (OMIM: 109770) carcinoembryonic antigen- ( 526) 1111 182.6 1.3e-45 XP_011525292 (OMIM: 163980) PREDICTED: carcinoembr ( 324) 1065 175.3 1.2e-43 NP_002474 (OMIM: 163980) carcinoembryonic antigen- ( 344) 1065 175.4 1.3e-43 XP_005258470 (OMIM: 114890) PREDICTED: carcinoembr ( 524) 1064 175.4 1.9e-43 XP_011524624 (OMIM: 114890) PREDICTED: carcinoembr ( 524) 1064 175.4 1.9e-43 NP_001295327 (OMIM: 114890) carcinoembryonic antig ( 701) 1064 175.5 2.3e-43 XP_016881634 (OMIM: 114890) PREDICTED: carcinoembr ( 701) 1064 175.5 2.3e-43 NP_004354 (OMIM: 114890) carcinoembryonic antigen- ( 702) 1064 175.5 2.3e-43 NP_001278413 (OMIM: 114890) carcinoembryonic antig ( 702) 1064 175.5 2.3e-43 XP_016881635 (OMIM: 114890) PREDICTED: carcinoembr ( 617) 1060 174.9 3.2e-43 XP_016881685 (OMIM: 615747) PREDICTED: carcinoembr ( 331) 1056 174.0 3.2e-43 NP_001807 (OMIM: 615747) carcinoembryonic antigen- ( 349) 1056 174.0 3.3e-43 XP_016881684 (OMIM: 615747) PREDICTED: carcinoembr ( 349) 1056 174.0 3.3e-43 XP_016881683 (OMIM: 615747) PREDICTED: carcinoembr ( 368) 1056 174.0 3.4e-43 XP_016881687 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1053 173.4 3.7e-43 XP_011524644 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1053 173.4 3.7e-43 XP_011524643 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1053 173.4 3.7e-43 XP_011524642 (OMIM: 615747) PREDICTED: carcinoembr ( 415) 1056 174.1 3.7e-43 XP_016882492 (OMIM: 176394) PREDICTED: pregnancy-s ( 335) 823 138.2 1.8e-32 NP_001123486 (OMIM: 176394) pregnancy-specific bet ( 335) 823 138.2 1.8e-32 NP_002772 (OMIM: 176394) pregnancy-specific beta-1 ( 335) 823 138.2 1.8e-32 NP_001317453 (OMIM: 176390) pregnancy-specific bet ( 326) 815 137.0 4.2e-32 XP_005259122 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 815 137.0 4.3e-32 XP_011525427 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 810 136.3 7.3e-32 XP_011525288 (OMIM: 176397) PREDICTED: pregnancy-s ( 326) 806 135.6 1.1e-31 NP_001288637 (OMIM: 176398) pregnancy-specific bet ( 333) 803 135.2 1.5e-31 XP_005259132 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 803 135.3 1.7e-31 NP_002775 (OMIM: 176398) pregnancy-specific beta-1 ( 426) 803 135.3 1.8e-31 XP_016882496 (OMIM: 176398) PREDICTED: pregnancy-s ( 436) 803 135.3 1.8e-31 XP_016882493 (OMIM: 176398) PREDICTED: pregnancy-s ( 495) 803 135.4 2e-31 NP_001027020 (OMIM: 176395) pregnancy-specific bet ( 424) 799 134.7 2.8e-31 NP_002773 (OMIM: 176395) pregnancy-specific beta-1 ( 435) 799 134.7 2.8e-31 NP_001263424 (OMIM: 176393) pregnancy-specific bet ( 326) 797 134.2 2.9e-31 XP_016882490 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 797 134.3 2.9e-31 XP_011525429 (OMIM: 176392) PREDICTED: pregnancy-s ( 272) 794 133.7 3.5e-31 NP_002776 (OMIM: 176401) pregnancy-specific beta-1 ( 335) 793 133.6 4.4e-31 NP_112536 (OMIM: 176391) pregnancy-specific beta-1 ( 335) 792 133.5 4.9e-31 NP_998798 (OMIM: 176393) pregnancy-specific beta-1 ( 326) 791 133.3 5.4e-31 XP_016882491 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 791 133.3 5.5e-31 XP_011525428 (OMIM: 176392) PREDICTED: pregnancy-s ( 357) 790 133.2 6.4e-31 NP_001288636 (OMIM: 176398) pregnancy-specific bet ( 333) 789 133.0 6.8e-31 XP_016882494 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 789 133.1 7.7e-31 XP_016882487 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 737 125.1 1.8e-28 XP_016882489 (OMIM: 176393) PREDICTED: pregnancy-s ( 342) 731 124.2 3.3e-28 >>XP_011525508 (OMIM: 109770) PREDICTED: carcinoembryoni (351 aa) initn: 1140 init1: 742 opt: 1111 Z-score: 942.2 bits: 182.4 E(85289): 9.7e-46 Smith-Waterman score: 1111; 69.9% identity (88.6% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: :: .:: .:::::::::::::::: :..:: . . .::::::::::::.::: : XP_011 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .:.::. . .:. .::::..::::::::..:::::::.::.:. XP_011 QLFGYSWYKGERVDGNRQIVGYAIG-TQQATPGPANSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::::.:::::: XP_011 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ .::::: ::::: ::. ::::.:::.:.:: :::::::::::.:.::::::::: : XP_011 INNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDT 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI XP_011 PTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >>NP_001171745 (OMIM: 109770) carcinoembryonic antigen-r (368 aa) initn: 1184 init1: 742 opt: 1111 Z-score: 941.9 bits: 182.4 E(85289): 1e-45 Smith-Waterman score: 1111; 69.9% identity (88.6% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: :: .:: .:::::::::::::::: :..:: . . .::::::::::::.::: : NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .:.::. . .:. .::::..::::::::..:::::::.::.:. NP_001 QLFGYSWYKGERVDGNRQIVGYAIG-TQQATPGPANSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::::.:::::: NP_001 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ .::::: ::::: ::. ::::.:::.:.:: :::::::::::.:.::::::::: : NP_001 INNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDT 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI NP_001 PTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >>NP_001171742 (OMIM: 109770) carcinoembryonic antigen-r (430 aa) initn: 1184 init1: 742 opt: 1111 Z-score: 941.1 bits: 182.5 E(85289): 1.1e-45 Smith-Waterman score: 1111; 69.9% identity (88.6% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: :: .:: .:::::::::::::::: :..:: . . .::::::::::::.::: : NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .:.::. . .:. .::::..::::::::..:::::::.::.:. NP_001 QLFGYSWYKGERVDGNRQIVGYAIG-TQQATPGPANSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::::.:::::: NP_001 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ .::::: ::::: ::. ::::.:::.:.:: :::::::::::.:.::::::::: : NP_001 INNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDT 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI NP_001 PTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >>NP_001171744 (OMIM: 109770) carcinoembryonic antigen-r (461 aa) initn: 1184 init1: 742 opt: 1111 Z-score: 940.8 bits: 182.6 E(85289): 1.2e-45 Smith-Waterman score: 1111; 69.9% identity (88.6% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: :: .:: .:::::::::::::::: :..:: . . .::::::::::::.::: : NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .:.::. . .:. .::::..::::::::..:::::::.::.:. NP_001 QLFGYSWYKGERVDGNRQIVGYAIG-TQQATPGPANSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::::.:::::: NP_001 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ .::::: ::::: ::. ::::.:::.:.:: :::::::::::.:.::::::::: : NP_001 INNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDT 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI NP_001 PTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >>NP_001020083 (OMIM: 109770) carcinoembryonic antigen-r (464 aa) initn: 1393 init1: 742 opt: 1111 Z-score: 940.7 bits: 182.6 E(85289): 1.2e-45 Smith-Waterman score: 1111; 69.9% identity (88.6% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: :: .:: .:::::::::::::::: :..:: . . .::::::::::::.::: : NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .:.::. . .:. .::::..::::::::..:::::::.::.:. NP_001 QLFGYSWYKGERVDGNRQIVGYAIG-TQQATPGPANSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::::.:::::: NP_001 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ .::::: ::::: ::. ::::.:::.:.:: :::::::::::.:.::::::::: : NP_001 INNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDT 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI NP_001 PTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >-- initn: 355 init1: 223 opt: 303 Z-score: 271.2 bits: 58.7 E(85289): 2.3e-08 Smith-Waterman score: 303; 35.8% identity (64.2% similar) in 162 aa overlap (108-265:284-444) 80 90 100 110 120 130 pF1KE2 RIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGIYTLHVIKENLVNEEVTR :.: :.: :..: :: :. . ...: NP_001 NLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTV 260 270 280 290 300 310 140 150 160 170 180 190 pF1KE2 QFYVFSE-PP---KPSITSNNFNPVENKDIVVLTCQPETQNTTYLWWVNNQSLLVSPRLL . . .: : ::.: ... . . .:: : :::. . . . :. .:::: : :. NP_001 KTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMK 320 330 340 350 360 370 200 210 220 230 240 250 pF1KE2 LSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQASSPDLSAGTAVS :: : :: . . ..: : : ::. ::.. ..:::. ::: :... . :: :. .. NP_001 LSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQEN-GLSPGAIAG 380 390 400 410 420 430 260 pF1KE2 IMIGVLAGMALI :.:::.: .::: NP_001 IVIGVVALVALIAVALACFLHFGKTGSSGPLQ 440 450 460 >>NP_001192273 (OMIM: 109770) carcinoembryonic antigen-r (468 aa) initn: 1393 init1: 742 opt: 1111 Z-score: 940.7 bits: 182.6 E(85289): 1.2e-45 Smith-Waterman score: 1111; 69.9% identity (88.6% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: :: .:: .:::::::::::::::: :..:: . . .::::::::::::.::: : NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .:.::. . .:. .::::..::::::::..:::::::.::.:. NP_001 QLFGYSWYKGERVDGNRQIVGYAIG-TQQATPGPANSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::::.:::::: NP_001 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ .::::: ::::: ::. ::::.:::.:.:: :::::::::::.:.::::::::: : NP_001 INNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDT 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI NP_001 PTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >-- initn: 355 init1: 223 opt: 303 Z-score: 271.2 bits: 58.7 E(85289): 2.3e-08 Smith-Waterman score: 303; 35.8% identity (64.2% similar) in 162 aa overlap (108-265:284-444) 80 90 100 110 120 130 pF1KE2 RIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGIYTLHVIKENLVNEEVTR :.: :.: :..: :: :. . ...: NP_001 NLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTV 260 270 280 290 300 310 140 150 160 170 180 190 pF1KE2 QFYVFSE-PP---KPSITSNNFNPVENKDIVVLTCQPETQNTTYLWWVNNQSLLVSPRLL . . .: : ::.: ... . . .:: : :::. . . . :. .:::: : :. NP_001 KTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMK 320 330 340 350 360 370 200 210 220 230 240 250 pF1KE2 LSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQASSPDLSAGTAVS :: : :: . . ..: : : ::. ::.. ..:::. ::: :... . :: :. .. NP_001 LSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQEN-GLSPGAIAG 380 390 400 410 420 430 260 pF1KE2 IMIGVLAGMALI :.:::.: .::: NP_001 IVIGVVALVALIAVALACFLHFGKTGRTTPMTHLTR 440 450 460 >>NP_001703 (OMIM: 109770) carcinoembryonic antigen-rela (526 aa) initn: 1393 init1: 742 opt: 1111 Z-score: 940.1 bits: 182.6 E(85289): 1.3e-45 Smith-Waterman score: 1111; 69.9% identity (88.6% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: :: .:: .:::::::::::::::: :..:: . . .::::::::::::.::: : NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .:.::. . .:. .::::..::::::::..:::::::.::.:. NP_001 QLFGYSWYKGERVDGNRQIVGYAIG-TQQATPGPANSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::::.:::::: NP_001 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ .::::: ::::: ::. ::::.:::.:.:: :::::::::::.:.::::::::: : NP_001 INNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDT 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI NP_001 PTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >-- initn: 339 init1: 223 opt: 303 Z-score: 270.6 bits: 58.7 E(85289): 2.5e-08 Smith-Waterman score: 303; 35.8% identity (64.2% similar) in 162 aa overlap (108-265:284-444) 80 90 100 110 120 130 pF1KE2 RIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGIYTLHVIKENLVNEEVTR :.: :.: :..: :: :. . ...: NP_001 NLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTV 260 270 280 290 300 310 140 150 160 170 180 190 pF1KE2 QFYVFSE-PP---KPSITSNNFNPVENKDIVVLTCQPETQNTTYLWWVNNQSLLVSPRLL . . .: : ::.: ... . . .:: : :::. . . . :. .:::: : :. NP_001 KTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMK 320 330 340 350 360 370 200 210 220 230 240 250 pF1KE2 LSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQASSPDLSAGTAVS :: : :: . . ..: : : ::. ::.. ..:::. ::: :... . :: :. .. NP_001 LSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQEN-GLSPGAIAG 380 390 400 410 420 430 260 pF1KE2 IMIGVLAGMALI :.:::.: .::: NP_001 IVIGVVALVALIAVALACFLHFGKTGRASDQRDLTEHKPSVSNHTQDHSNDPPNKMNEVT 440 450 460 470 480 490 >>XP_011525292 (OMIM: 163980) PREDICTED: carcinoembryoni (324 aa) initn: 1090 init1: 704 opt: 1065 Z-score: 904.5 bits: 175.3 E(85289): 1.2e-43 Smith-Waterman score: 1065; 66.1% identity (85.3% similar) in 245 aa overlap (1-244:1-244) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: ::: : :. .::. .::::::::::: :..:. .:. .::::::::::::..:: : XP_011 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI : ::.::::::: .: :.::: . .:. .::::..::::::::..:::::::.::.:. XP_011 NRIGYSWYKGERVDGNSLIVGYVIG-TQQATPGPAYSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::.:::::::: XP_011 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPEVQNTTYLWW 120 130 140 150 160 170 190 200 210 220 230 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRY-ESV ::.::: ::::: ::. : ::.:::. .:: : ::::::::..:.::::::::: : .: XP_011 VNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNVLYGPDV 180 190 200 210 220 230 240 250 260 pF1KE2 QASSPDLSAGTAVSIMIGVLAGMALI . :: XP_011 PTISPSKANYRPGENLNLSCHAASNPPAQYSWFINGTFQQSTQELFIPNITVNNSGSYMC 240 250 260 270 280 290 >>NP_002474 (OMIM: 163980) carcinoembryonic antigen-rela (344 aa) initn: 1156 init1: 704 opt: 1065 Z-score: 904.2 bits: 175.4 E(85289): 1.3e-43 Smith-Waterman score: 1065; 66.1% identity (85.3% similar) in 245 aa overlap (1-244:1-244) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ :: ::: : :. .::. .::::::::::: :..:. .:. .::::::::::::..:: : NP_002 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI : ::.::::::: .: :.::: . .:. .::::..::::::::..:::::::.::.:. NP_002 NRIGYSWYKGERVDGNSLIVGYVIG-TQQATPGPAYSGRETIYPNASLLIQNVTQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW :::.::: .:::::.: ::.:. : :::::.::: ::::.:: :..::.::.:::::::: NP_002 YTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPEVQNTTYLWW 120 130 140 150 160 170 190 200 210 220 230 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRY-ESV ::.::: ::::: ::. : ::.:::. .:: : ::::::::..:.::::::::: : .: NP_002 VNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNVLYGPDV 180 190 200 210 220 230 240 250 260 pF1KE2 QASSPDLSAGTAVSIMIGVLAGMALI . :: NP_002 PTISPSKANYRPGENLNLSCHAASNPPAQYSWFINGTFQQSTQELFIPNITVNNSGSYMC 240 250 260 270 280 290 >>XP_005258470 (OMIM: 114890) PREDICTED: carcinoembryoni (524 aa) initn: 1545 init1: 666 opt: 1064 Z-score: 901.1 bits: 175.4 E(85289): 1.9e-43 Smith-Waterman score: 1064; 66.9% identity (86.0% similar) in 236 aa overlap (1-236:1-235) 10 20 30 40 50 60 pF1KE2 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ : :::: :.: ::::: :::::::::::: :..:. .:. .::::::::::::.::: : XP_005 MESPSAPPHRWCIPWQRLLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGI .:.::.::::::: .: .::::: . .:. .::::..::: ::::..:::::. .::.:. XP_005 HLFGYSWYKGERVDGNRQIIGYVIG-TQQATPGPAYSGREIIYPNASLLIQNIIQNDTGF 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 YTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW ::::::: .:::::.: :: :. : :::::.::: .:::.:: :..::.::::..::::: XP_005 YTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPETQDATYLWW 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 VNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNVRYESVQ :::::: ::::: ::. ::::.:...:.:: . :.:: ::::.: ::: : ::: : XP_005 VNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDA 180 190 200 210 220 230 250 260 pF1KE2 ASSPDLSAGTAVSIMIGVLAGMALI XP_005 PTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTC 240 250 260 270 280 290 >-- initn: 520 init1: 471 opt: 524 Z-score: 453.7 bits: 92.6 E(85289): 1.6e-18 Smith-Waterman score: 524; 51.7% identity (75.0% similar) in 172 aa overlap (73-236:245-413) 50 60 70 80 90 100 pF1KE2 FNVAEGKEVLLVVHNESQNLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETI ....:: : :.: . : .: .. . XP_005 CETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRS-GENLNLSCHAASNPP--AQYSW 220 230 240 250 260 270 110 120 130 140 150 pF1KE2 YPNGT-------LLIQNVTHNDAGIYTLHVIKENL-VNEEVTRQFYVFSEPPKPSITSNN . ::: :.: :.: :..: :: .. . . .:. .. . :..::::: ::::: XP_005 FVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNN 280 290 300 310 320 330 160 170 180 190 200 210 pF1KE2 FNPVENKDIVVLTCQPETQNTTYLWWVNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPY ::::..: :.:::.:: :::::::::::::: ::::: ::.:::::.:::.:.::.::: XP_005 SNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPY 340 350 360 370 380 390 220 230 240 250 260 pF1KE2 ECEIQNPVGASRSDPVTLNVRYESVQASSPDLSAGTAVSIMIGVLAGMALI :: ::: .....:::: ::: : XP_005 ECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLI 400 410 420 430 440 450 265 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 17:01:04 2016 done: Tue Nov 8 17:01:05 2016 Total Scan time: 4.310 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]