FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6511, 175 aa 1>>>pF1KE6511 175 - 175 aa - 175 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2932+/-0.000694; mu= 13.1158+/- 0.042 mean_var=67.1347+/-13.598, 0's: 0 Z-trim(110.1): 13 B-trim: 0 in 0/49 Lambda= 0.156531 statistics sampled from 11337 (11350) to 11337 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.349), width: 16 Scan time: 1.550 The best scores are: opt bits E(32554) CCDS12579.1 B9D2 gene_id:80776|Hs108|chr19 ( 175) 1261 292.9 6.8e-80 CCDS11205.1 B9D1 gene_id:27077|Hs108|chr17 ( 204) 281 71.6 3.2e-13 CCDS82088.1 B9D1 gene_id:27077|Hs108|chr17 ( 161) 264 67.7 3.8e-12 CCDS82086.1 B9D1 gene_id:27077|Hs108|chr17 ( 186) 264 67.8 4.3e-12 CCDS82087.1 B9D1 gene_id:27077|Hs108|chr17 ( 187) 264 67.8 4.3e-12 CCDS82089.1 B9D1 gene_id:27077|Hs108|chr17 ( 153) 247 63.9 5.2e-11 >>CCDS12579.1 B9D2 gene_id:80776|Hs108|chr19 (175 aa) initn: 1261 init1: 1261 opt: 1261 Z-score: 1547.9 bits: 292.9 E(32554): 6.8e-80 Smith-Waterman score: 1261; 99.4% identity (100.0% similar) in 175 aa overlap (1-175:1-175) 10 20 30 40 50 60 pF1KE6 MAEVHVIGQIMGASGFSESSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQIGDMAYWSHP ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAEVHVIGQIIGASGFSESSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQIGDMAYWSHP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 IDLHFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLACPTWRPLGSWR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 IDLHFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLACPTWRPLGSWR 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 EQLARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFDRYGVEC ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 EQLARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFDRYGVEC 130 140 150 160 170 >>CCDS11205.1 B9D1 gene_id:27077|Hs108|chr17 (204 aa) initn: 220 init1: 153 opt: 281 Z-score: 350.8 bits: 71.6 E(32554): 3.2e-13 Smith-Waterman score: 281; 28.3% identity (59.0% similar) in 173 aa overlap (6-174:13-184) 10 20 30 40 50 pF1KE6 MAEVHVIGQIMGASGFSE-SSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQ-- : ::. .:. : : ..:.::. . : : .:..:: .:. . . CCDS11 MATASPSVFLLMVNGQVESAQ-FPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQD 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 IGDMAYWSHPIDLHFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLAC . . :. :::. : . . :::.. ..:.. : :: . ::: ::: ::: :. . CCDS11 VRQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTI 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 PTWRPLGSWREQ-LARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFD : . : .. . : .. :.: :. .. .: : .. . : : : .... ... CCDS11 PMFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVTKDMR 120 130 140 150 160 170 170 pF1KE6 RYGVEC . : . CCDS11 KLGYDTGPSDTQGVLGPSPPQSFPQ 180 190 200 >>CCDS82088.1 B9D1 gene_id:27077|Hs108|chr17 (161 aa) initn: 220 init1: 153 opt: 264 Z-score: 331.6 bits: 67.7 E(32554): 3.8e-12 Smith-Waterman score: 264; 31.0% identity (59.3% similar) in 145 aa overlap (6-146:13-156) 10 20 30 40 50 pF1KE6 MAEVHVIGQIMGASGFSE-SSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQ-- : ::. .:. : : ..:.::. . : : .:..:: .:. . . CCDS82 MATASPSVFLLMVNGQVESAQ-FPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQD 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 IGDMAYWSHPIDLHFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLAC . . :. :::. : . . :::.. ..:.. : :: . ::: ::: ::: :. . CCDS82 VRQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTI 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 PTWRPLGSWREQ-LARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFD : . : .. . : .. :.: :. .. .: : CCDS82 PMFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREAQPG 120 130 140 150 160 170 pF1KE6 RYGVEC >>CCDS82086.1 B9D1 gene_id:27077|Hs108|chr17 (186 aa) initn: 249 init1: 182 opt: 264 Z-score: 330.7 bits: 67.8 E(32554): 4.3e-12 Smith-Waterman score: 264; 31.0% identity (59.3% similar) in 145 aa overlap (6-146:13-156) 10 20 30 40 50 pF1KE6 MAEVHVIGQIMGASGFSE-SSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQ-- : ::. .:. : : ..:.::. . : : .:..:: .:. . . CCDS82 MATASPSVFLLMVNGQVESAQ-FPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQD 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 IGDMAYWSHPIDLHFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLAC . . :. :::. : . . :::.. ..:.. : :: . ::: ::: ::: :. . CCDS82 VRQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTI 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 PTWRPLGSWREQ-LARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFD : . : .. . : .. :.: :. .. .: : CCDS82 PMFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREAITAPRKAVFSVHGLTSPRALA 120 130 140 150 160 170 170 pF1KE6 RYGVEC CCDS82 LVHIKGT 180 >>CCDS82087.1 B9D1 gene_id:27077|Hs108|chr17 (187 aa) initn: 220 init1: 153 opt: 264 Z-score: 330.6 bits: 67.8 E(32554): 4.3e-12 Smith-Waterman score: 264; 31.0% identity (59.3% similar) in 145 aa overlap (6-146:13-156) 10 20 30 40 50 pF1KE6 MAEVHVIGQIMGASGFSE-SSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQ-- : ::. .:. : : ..:.::. . : : .:..:: .:. . . CCDS82 MATASPSVFLLMVNGQVESAQ-FPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQD 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 IGDMAYWSHPIDLHFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLAC . . :. :::. : . . :::.. ..:.. : :: . ::: ::: ::: :. . CCDS82 VRQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTI 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 PTWRPLGSWREQ-LARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFD : . : .. . : .. :.: :. .. .: : CCDS82 PMFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREDENAEAEIPRSTWVSLCPSPAW 120 130 140 150 160 170 170 pF1KE6 RYGVEC CCDS82 LMLPFCPQ 180 >>CCDS82089.1 B9D1 gene_id:27077|Hs108|chr17 (153 aa) initn: 220 init1: 153 opt: 247 Z-score: 311.2 bits: 63.9 E(32554): 5.2e-11 Smith-Waterman score: 247; 33.3% identity (61.7% similar) in 120 aa overlap (6-122:13-131) 10 20 30 40 50 pF1KE6 MAEVHVIGQIMGASGFSE-SSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQ-- : ::. .:. : : ..:.::. . : : .:..:: .:. . . CCDS82 MATASPSVFLLMVNGQVESAQ-FPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQD 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 IGDMAYWSHPIDLHFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLAC . . :. :::. : . . :::.. ..:.. : :: . ::: ::: ::: :. . CCDS82 VRQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 PTWRPLGSWREQLARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFDR : . : .. . : CCDS82 PMFVPESTSKLQKFTSLCLVASSDLQAAPPTEDK 120 130 140 150 175 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:58:13 2016 done: Tue Nov 8 13:58:13 2016 Total Scan time: 1.550 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]