FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3995, 283 aa 1>>>pF1KE3995 283 - 283 aa - 283 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1539+/-0.000295; mu= 16.8531+/- 0.018 mean_var=75.6321+/-15.202, 0's: 0 Z-trim(118.9): 93 B-trim: 0 in 0/54 Lambda= 0.147476 statistics sampled from 32183 (32285) to 32183 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.379), width: 16 Scan time: 5.860 The best scores are: opt bits E(85289) NP_849142 (OMIM: 609099) F-box only protein 27 [Ho ( 283) 2015 437.5 1.4e-122 XP_016881779 (OMIM: 609099) PREDICTED: F-box only ( 249) 1703 371.0 1.2e-102 NP_079183 (OMIM: 609094) F-box only protein 17 iso ( 278) 1157 254.9 1.2e-67 NP_680474 (OMIM: 609094) F-box only protein 17 iso ( 287) 1157 254.9 1.3e-67 XP_005263505 (OMIM: 605647) PREDICTED: F-box only ( 293) 676 152.6 8.2e-37 XP_011539534 (OMIM: 605647) PREDICTED: F-box only ( 293) 676 152.6 8.2e-37 XP_005263506 (OMIM: 605647) PREDICTED: F-box only ( 293) 676 152.6 8.2e-37 XP_005263508 (OMIM: 605647) PREDICTED: F-box only ( 293) 676 152.6 8.2e-37 XP_016856496 (OMIM: 605647) PREDICTED: F-box only ( 293) 676 152.6 8.2e-37 XP_006710634 (OMIM: 605647) PREDICTED: F-box only ( 293) 676 152.6 8.2e-37 NP_060908 (OMIM: 605647) F-box only protein 6 [Hom ( 293) 676 152.6 8.2e-37 NP_036300 (OMIM: 607112) F-box only protein 2 [Hom ( 296) 664 150.0 4.9e-36 NP_001014765 (OMIM: 609111) F-box only protein 44 ( 255) 604 137.2 3e-32 XP_016858332 (OMIM: 609111) PREDICTED: F-box only ( 255) 604 137.2 3e-32 NP_001291720 (OMIM: 609111) F-box only protein 44 ( 255) 604 137.2 3e-32 XP_006711108 (OMIM: 609111) PREDICTED: F-box only ( 255) 604 137.2 3e-32 NP_149438 (OMIM: 609111) F-box only protein 44 iso ( 255) 604 137.2 3e-32 NP_001001414 (OMIM: 615901) F-box only protein 50 ( 275) 283 68.9 1.2e-11 XP_016858333 (OMIM: 609111) PREDICTED: F-box only ( 224) 150 40.6 0.0033 NP_904319 (OMIM: 609111) F-box only protein 44 iso ( 224) 150 40.6 0.0033 NP_001291719 (OMIM: 609111) F-box only protein 44 ( 224) 150 40.6 0.0033 NP_904320 (OMIM: 609111) F-box only protein 44 iso ( 224) 150 40.6 0.0033 XP_006711106 (OMIM: 609111) PREDICTED: F-box only ( 256) 150 40.6 0.0036 XP_005263594 (OMIM: 609111) PREDICTED: F-box only ( 256) 150 40.6 0.0036 XP_016858331 (OMIM: 609111) PREDICTED: F-box only ( 256) 150 40.6 0.0036 XP_011540737 (OMIM: 609111) PREDICTED: F-box only ( 256) 150 40.6 0.0036 XP_005263593 (OMIM: 609111) PREDICTED: F-box only ( 256) 150 40.6 0.0036 NP_001317284 (OMIM: 609111) F-box only protein 44 ( 256) 150 40.6 0.0036 NP_001245140 (OMIM: 608519) F-box only protein 16 ( 280) 146 39.8 0.007 NP_758954 (OMIM: 608519) F-box only protein 16 iso ( 292) 146 39.8 0.0073 XP_011525208 (OMIM: 615901) PREDICTED: F-box only ( 195) 143 39.0 0.0083 >>NP_849142 (OMIM: 609099) F-box only protein 27 [Homo s (283 aa) initn: 2015 init1: 2015 opt: 2015 Z-score: 2321.7 bits: 437.5 E(85289): 1.4e-122 Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283) 10 20 30 40 50 60 pF1KE3 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_849 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_849 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_849 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_849 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV 190 200 210 220 230 240 250 260 270 280 pF1KE3 FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS ::::::::::::::::::::::::::::::::::::::::::: NP_849 FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 250 260 270 280 >>XP_016881779 (OMIM: 609099) PREDICTED: F-box only prot (249 aa) initn: 1703 init1: 1703 opt: 1703 Z-score: 1963.7 bits: 371.0 E(85289): 1.2e-102 Smith-Waterman score: 1703; 100.0% identity (100.0% similar) in 236 aa overlap (1-236:1-236) 10 20 30 40 50 60 pF1KE3 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHNYSR 190 200 210 220 230 240 250 260 270 280 pF1KE3 FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS XP_016 ELSPPPKEK >>NP_079183 (OMIM: 609094) F-box only protein 17 isoform (278 aa) initn: 856 init1: 856 opt: 1157 Z-score: 1335.2 bits: 254.9 E(85289): 1.2e-67 Smith-Waterman score: 1157; 57.7% identity (79.0% similar) in 286 aa overlap (1-283:1-278) 10 20 30 40 50 60 pF1KE3 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL ::: .:: :.:: .: ::: ::::::. ::::::::.:. ::: :::.:: . NP_079 MGARLSR---RRLPA---DPSLALD--ALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI 10 20 30 40 50 70 80 90 100 110 pF1KE3 VDGQALWLLILARDHGATGRALLHLARSC--QSPARNARP-CPLGRFCARRPIGRNLIRN ::: ..::: ::::..: :::: .:. : .. .. : : :.:.: : :.::::: : NP_079 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE ::..:.: : :.:::.::..:.: : :::::::::::::: :: :.:..:: ::.: : NP_079 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV ::::..:::::.::::::.. ::.:.: :.:::. . . :::: :::. ::.. .: .: NP_079 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV 180 190 200 210 220 230 240 250 260 270 280 pF1KE3 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:::.:. :.:.::::. :.:.. :.::::: ::.::: ::.::: NP_079 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 240 250 260 270 >>NP_680474 (OMIM: 609094) F-box only protein 17 isoform (287 aa) initn: 879 init1: 856 opt: 1157 Z-score: 1335.0 bits: 254.9 E(85289): 1.3e-67 Smith-Waterman score: 1157; 57.7% identity (79.0% similar) in 286 aa overlap (1-283:10-287) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCR ::: .:: :.:: .: ::: ::::::. ::::::::.:. ::: NP_680 MKQGLWLLEMGARLSR---RRLPA---DPSLALD--ALPPELLVQVLSHVPPRSLVTRCR 10 20 30 40 50 60 70 80 90 100 pF1KE3 QVCRGWRALVDGQALWLLILARDHGATGRALLHLARSC--QSPARNARP-CPLGRFCARR :::.:: .::: ..::: ::::..: :::: .:. : .. .. : : :.:.: : NP_680 PVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRA 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 PIGRNLIRNPCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLD :.::::: : ::..:.: : :.:::.::..:.: : :::::::::::::: :: :.:..: NP_680 PFGRNLIFNSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVD 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 LEEEGLWPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQ : ::.: :::::..:::::.::::::.. ::.:.: :.:::. . . :::: :::. : NP_680 LVMEGVWQELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQ 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE3 WNNNACLHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS :.. .: .:.:::.:. :.:.::::. :.:.. :.::::: ::.::: ::.::: NP_680 WTERGCRQVSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 240 250 260 270 280 >>XP_005263505 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 684 init1: 450 opt: 676 Z-score: 781.8 bits: 152.6 E(85289): 8.2e-37 Smith-Waterman score: 676; 40.8% identity (64.0% similar) in 272 aa overlap (18-283:4-262) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA :. . ::: ...:: ..:: ...::: : :: :: :: :: XP_005 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD 10 20 30 40 60 70 80 90 100 110 pF1KE3 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC :.: ..:: :. : .... ..:. . . : : . :::.:::: XP_005 LIDLMTLWKRKCLRE----G----FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL ..: . :... .::: : :: . : : . ::::. : :.:..:: :: XP_005 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . XP_005 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW 160 170 180 190 200 210 240 250 260 270 280 pF1KE3 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:...::. :::.. :.: :.:::.::: :: ::::::..: ... XP_005 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG 220 230 240 250 260 270 XP_005 QKHGQEEAAQSPYRAVVQIF 280 290 >>XP_011539534 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 684 init1: 450 opt: 676 Z-score: 781.8 bits: 152.6 E(85289): 8.2e-37 Smith-Waterman score: 676; 40.8% identity (64.0% similar) in 272 aa overlap (18-283:4-262) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA :. . ::: ...:: ..:: ...::: : :: :: :: :: XP_011 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD 10 20 30 40 60 70 80 90 100 110 pF1KE3 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC :.: ..:: :. : .... ..:. . . : : . :::.:::: XP_011 LIDLMTLWKRKCLRE----G----FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL ..: . :... .::: : :: . : : . ::::. : :.:..:: :: XP_011 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . XP_011 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW 160 170 180 190 200 210 240 250 260 270 280 pF1KE3 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:...::. :::.. :.: :.:::.::: :: ::::::..: ... XP_011 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG 220 230 240 250 260 270 XP_011 QKHGQEEAAQSPYRAVVQIF 280 290 >>XP_005263506 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 684 init1: 450 opt: 676 Z-score: 781.8 bits: 152.6 E(85289): 8.2e-37 Smith-Waterman score: 676; 40.8% identity (64.0% similar) in 272 aa overlap (18-283:4-262) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA :. . ::: ...:: ..:: ...::: : :: :: :: :: XP_005 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD 10 20 30 40 60 70 80 90 100 110 pF1KE3 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC :.: ..:: :. : .... ..:. . . : : . :::.:::: XP_005 LIDLMTLWKRKCLRE----G----FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL ..: . :... .::: : :: . : : . ::::. : :.:..:: :: XP_005 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . XP_005 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW 160 170 180 190 200 210 240 250 260 270 280 pF1KE3 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:...::. :::.. :.: :.:::.::: :: ::::::..: ... XP_005 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG 220 230 240 250 260 270 XP_005 QKHGQEEAAQSPYRAVVQIF 280 290 >>XP_005263508 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 684 init1: 450 opt: 676 Z-score: 781.8 bits: 152.6 E(85289): 8.2e-37 Smith-Waterman score: 676; 40.8% identity (64.0% similar) in 272 aa overlap (18-283:4-262) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA :. . ::: ...:: ..:: ...::: : :: :: :: :: XP_005 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD 10 20 30 40 60 70 80 90 100 110 pF1KE3 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC :.: ..:: :. : .... ..:. . . : : . :::.:::: XP_005 LIDLMTLWKRKCLRE----G----FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL ..: . :... .::: : :: . : : . ::::. : :.:..:: :: XP_005 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . XP_005 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW 160 170 180 190 200 210 240 250 260 270 280 pF1KE3 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:...::. :::.. :.: :.:::.::: :: ::::::..: ... XP_005 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG 220 230 240 250 260 270 XP_005 QKHGQEEAAQSPYRAVVQIF 280 290 >>XP_016856496 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 684 init1: 450 opt: 676 Z-score: 781.8 bits: 152.6 E(85289): 8.2e-37 Smith-Waterman score: 676; 40.8% identity (64.0% similar) in 272 aa overlap (18-283:4-262) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA :. . ::: ...:: ..:: ...::: : :: :: :: :: XP_016 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD 10 20 30 40 60 70 80 90 100 110 pF1KE3 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC :.: ..:: :. : .... ..:. . . : : . :::.:::: XP_016 LIDLMTLWKRKCLRE----G----FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL ..: . :... .::: : :: . : : . ::::. : :.:..:: :: XP_016 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . XP_016 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW 160 170 180 190 200 210 240 250 260 270 280 pF1KE3 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:...::. :::.. :.: :.:::.::: :: ::::::..: ... XP_016 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG 220 230 240 250 260 270 XP_016 QKHGQEEAAQSPYRAVVQIF 280 290 >>XP_006710634 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 684 init1: 450 opt: 676 Z-score: 781.8 bits: 152.6 E(85289): 8.2e-37 Smith-Waterman score: 676; 40.8% identity (64.0% similar) in 272 aa overlap (18-283:4-262) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA :. . ::: ...:: ..:: ...::: : :: :: :: :: XP_006 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD 10 20 30 40 60 70 80 90 100 110 pF1KE3 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC :.: ..:: :. : .... ..:. . . : : . :::.:::: XP_006 LIDLMTLWKRKCLRE----G----FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL ..: . :... .::: : :: . : : . ::::. : :.:..:: :: XP_006 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . XP_006 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW 160 170 180 190 200 210 240 250 260 270 280 pF1KE3 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:...::. :::.. :.: :.:::.::: :: ::::::..: ... XP_006 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG 220 230 240 250 260 270 XP_006 QKHGQEEAAQSPYRAVVQIF 280 290 283 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:08:22 2016 done: Sun Nov 6 08:08:23 2016 Total Scan time: 5.860 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]