FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3995, 283 aa 1>>>pF1KE3995 283 - 283 aa - 283 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5130+/-0.000643; mu= 14.7390+/- 0.039 mean_var=74.5865+/-14.751, 0's: 0 Z-trim(112.2): 39 B-trim: 0 in 0/51 Lambda= 0.148506 statistics sampled from 12941 (12979) to 12941 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.399), width: 16 Scan time: 2.170 The best scores are: opt bits E(32554) CCDS12527.1 FBXO27 gene_id:126433|Hs108|chr19 ( 283) 2015 440.3 7.3e-124 CCDS12526.1 FBXO17 gene_id:115290|Hs108|chr19 ( 278) 1157 256.5 1.6e-68 CCDS133.1 FBXO6 gene_id:26270|Hs108|chr1 ( 293) 676 153.5 1.7e-37 CCDS130.1 FBXO2 gene_id:26232|Hs108|chr1 ( 296) 664 150.9 1e-36 CCDS132.1 FBXO44 gene_id:93611|Hs108|chr1 ( 255) 604 138.0 6.7e-33 CCDS12529.1 NCCRP1 gene_id:342897|Hs108|chr19 ( 275) 283 69.2 3.6e-12 >>CCDS12527.1 FBXO27 gene_id:126433|Hs108|chr19 (283 aa) initn: 2015 init1: 2015 opt: 2015 Z-score: 2337.2 bits: 440.3 E(32554): 7.3e-124 Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283) 10 20 30 40 50 60 pF1KE3 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV 190 200 210 220 230 240 250 260 270 280 pF1KE3 FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS ::::::::::::::::::::::::::::::::::::::::::: CCDS12 FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 250 260 270 280 >>CCDS12526.1 FBXO17 gene_id:115290|Hs108|chr19 (278 aa) initn: 856 init1: 856 opt: 1157 Z-score: 1343.9 bits: 256.5 E(32554): 1.6e-68 Smith-Waterman score: 1157; 57.7% identity (79.0% similar) in 286 aa overlap (1-283:1-278) 10 20 30 40 50 60 pF1KE3 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL ::: .:: :.:: .: ::: ::::::. ::::::::.:. ::: :::.:: . CCDS12 MGARLSR---RRLPA---DPSLALD--ALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI 10 20 30 40 50 70 80 90 100 110 pF1KE3 VDGQALWLLILARDHGATGRALLHLARSC--QSPARNARP-CPLGRFCARRPIGRNLIRN ::: ..::: ::::..: :::: .:. : .. .. : : :.:.: : :.::::: : CCDS12 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE ::..:.: : :.:::.::..:.: : :::::::::::::: :: :.:..:: ::.: : CCDS12 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV ::::..:::::.::::::.. ::.:.: :.:::. . . :::: :::. ::.. .: .: CCDS12 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV 180 190 200 210 220 230 240 250 260 270 280 pF1KE3 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:::.:. :.:.::::. :.:.. :.::::: ::.::: ::.::: CCDS12 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 240 250 260 270 >>CCDS133.1 FBXO6 gene_id:26270|Hs108|chr1 (293 aa) initn: 684 init1: 450 opt: 676 Z-score: 786.6 bits: 153.5 E(32554): 1.7e-37 Smith-Waterman score: 676; 40.8% identity (64.0% similar) in 272 aa overlap (18-283:4-262) 10 20 30 40 50 pF1KE3 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA :. . ::: ...:: ..:: ...::: : :: :: :: :: CCDS13 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD 10 20 30 40 60 70 80 90 100 110 pF1KE3 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC :.: ..:: :. : .... ..:. . . : : . :::.:::: CCDS13 LIDLMTLWKRKCLRE----G----FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL ..: . :... .::: : :: . : : . ::::. : :.:..:: :: CCDS13 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . CCDS13 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW 160 170 180 190 200 210 240 250 260 270 280 pF1KE3 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:...::. :::.. :.: :.:::.::: :: ::::::..: ... CCDS13 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG 220 230 240 250 260 270 CCDS13 QKHGQEEAAQSPYRAVVQIF 280 290 >>CCDS130.1 FBXO2 gene_id:26232|Hs108|chr1 (296 aa) initn: 685 init1: 265 opt: 664 Z-score: 772.6 bits: 150.9 E(32554): 1e-36 Smith-Waterman score: 664; 41.8% identity (65.1% similar) in 275 aa overlap (16-278:32-294) 10 20 30 40 pF1KE3 MGASVSRGRAARVPAPEPEPEE-----ALDLSQLPPELLLVVLSH :: . :: : :..:: ::: ::. CCDS13 DGDGDPESVGQPEEASPEEQPEEASAEEERPEDQQEEEAAAAAAYLDELPEPLLLRVLAA 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 VPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCP .: :. :: :: :. :::: :::: ...: . .. .. :. . CCDS13 LPAAELVQACRLVCLRWKELVDGAPLWLLK-CQQEGLVPEGGVEEERDHWQQFY------ 70 80 90 100 110 110 120 130 140 150 pF1KE3 LGRFCARRPIGRNLIRNPCGQEGLRKWM-VQHGGDGWVVEE--NRTTVPGAPSQTC---F : ..: :::.:::::.: :. : :.:::::: ::: . . : . ... : CCDS13 ---FLSKRR--RNLLRNPCGEEDLEGWCDVEHGGDGWRVEELPGDSGVEFTHDESVKKYF 120 130 140 150 160 160 170 180 190 200 210 pF1KE3 VTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQT ..:: :: : ::.::. :: : ::::. . : :.::...: :.::.:.: :.::. ... CCDS13 ASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRSDAGCLYELTVKLLSEHEN 170 180 190 200 210 220 220 230 240 250 260 270 pF1KE3 VLDKFSAVPDPIPQWNNNAC-LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTN :: .::. .:: .... ....:.:.. ::::: ::: :::. .: : .:::::: CCDS13 VLAEFSSGQVAVPQDSDGGGWMEISHTFTDYGPGVRFVRFEHGGQDSVYWKGWFGARVTN 230 240 250 260 270 280 280 pF1KE3 SSVIVRVRLS ::: : CCDS13 SSVWVEP 290 >>CCDS132.1 FBXO44 gene_id:93611|Hs108|chr1 (255 aa) initn: 629 init1: 396 opt: 604 Z-score: 704.1 bits: 138.0 E(32554): 6.7e-33 Smith-Waterman score: 604; 39.4% identity (63.7% similar) in 259 aa overlap (25-278:5-250) 10 20 30 40 50 60 pF1KE3 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL ....:: ..:: ...::: : :: :: :: :: : CCDS13 MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDL 10 20 30 40 70 80 90 100 110 120 pF1KE3 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG .: .:: :. : .... ..:. . . : : . :::..:::. CCDS13 IDLVTLWKRKCLRE----G----FITEDWDQPVADWKI-----FYFLRSLHRNLLHNPCA 50 60 70 80 130 140 150 160 170 pF1KE3 QEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLW .::.. : .. .::: : ::. .: :. . ::::. : :.::.::. :: : CCDS13 EEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYW 90 100 110 120 130 140 180 190 200 210 220 230 pF1KE3 PELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACL ::.:. : .: :.::..:: : : :.: ::::.. .. : :. : : : .. CCDS13 EELMDTTRPDIEVKDWFAARPDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWR 150 160 170 180 190 200 240 250 260 270 280 pF1KE3 HVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS .:.:.::: :::.. :.: : ::..::: :: ::::::. . CCDS13 EVSHTFSNYPPGVRYIWFQHGGVDTHYWAGWYGPRVTNSSITIGPPLP 210 220 230 240 250 >>CCDS12529.1 NCCRP1 gene_id:342897|Hs108|chr19 (275 aa) initn: 318 init1: 158 opt: 283 Z-score: 331.9 bits: 69.2 E(32554): 3.6e-12 Smith-Waterman score: 283; 34.4% identity (58.5% similar) in 183 aa overlap (107-281:98-274) 80 90 100 110 120 130 pF1KE3 ATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGLRKWM-VQHGGDG :::. :::.:.: . ::. . . : CCDS12 HARQLLLEEWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSP-NPEGINIYEPAPPTGPT 70 80 90 100 110 120 140 150 160 170 180 190 pF1KE3 WVVEENRTTVPGAPSQTC-FVTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDWWGA :. . : .: . . :: :.: .:: :::: ::::. . : : ::. CCDS12 QRPLETLGNFRGWYIRTEKLQQNQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFED 130 140 150 160 170 180 200 210 220 230 240 pF1KE3 RHDSGCMYRLLVQLLDANQ-TVLDKFSAVP-----DPIPQWNNNACLHVTHVFSNIKMGV . ..:.:.: : :: :.. ::. . ..: : .: ..:.::: . :: CCDS12 SRLDACVYELHVWLLAADRRTVIAQHHVAPRTSGRGPPGRW-----VQVSHVFRHYGPGV 190 200 210 220 230 240 250 260 270 280 pF1KE3 RFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS ::. : :.... . .: .:::.::: :..: CCDS12 RFIHFLHKAKNRMEPGGLRRTRVTDSSVSVQLRE 250 260 270 283 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:08:22 2016 done: Sun Nov 6 08:08:22 2016 Total Scan time: 2.170 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]