FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5271, 218 aa 1>>>pF1KE5271 218 - 218 aa - 218 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2834+/- 0.001; mu= 13.7853+/- 0.060 mean_var=62.5583+/-12.617, 0's: 0 Z-trim(103.5): 21 B-trim: 0 in 0/52 Lambda= 0.162155 statistics sampled from 7451 (7454) to 7451 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.229), width: 16 Scan time: 1.400 The best scores are: opt bits E(32554) CCDS12517.1 EIF3K gene_id:27335|Hs108|chr19 ( 218) 1450 347.8 3e-96 CCDS74360.1 EIF3K gene_id:27335|Hs108|chr19 ( 192) 928 225.7 1.6e-59 CCDS77293.1 EIF3K gene_id:27335|Hs108|chr19 ( 131) 889 216.5 6.3e-57 >>CCDS12517.1 EIF3K gene_id:27335|Hs108|chr19 (218 aa) initn: 1450 init1: 1450 opt: 1450 Z-score: 1841.4 bits: 347.8 E(32554): 3e-96 Smith-Waterman score: 1450; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218) 10 20 30 40 50 60 pF1KE5 MAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 FQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWS 130 140 150 160 170 180 190 200 210 pF1KE5 ADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASSQ :::::::::::::::::::::::::::::::::::::: CCDS12 ADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASSQ 190 200 210 >>CCDS74360.1 EIF3K gene_id:27335|Hs108|chr19 (192 aa) initn: 1249 init1: 928 opt: 928 Z-score: 1182.2 bits: 225.7 E(32554): 1.6e-59 Smith-Waterman score: 1201; 87.6% identity (88.1% similar) in 218 aa overlap (1-218:1-192) 10 20 30 40 50 60 pF1KE5 MAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 FQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWS ::::::::::::::::::::. ::::::::::::: CCDS74 LDENMDLLEGITGFEDSVRKY--------------------------SQLKVWMSKYGWS 130 140 150 190 200 210 pF1KE5 ADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASSQ :::::::::::::::::::::::::::::::::::::: CCDS74 ADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASSQ 160 170 180 190 >>CCDS77293.1 EIF3K gene_id:27335|Hs108|chr19 (131 aa) initn: 889 init1: 889 opt: 889 Z-score: 1135.5 bits: 216.5 E(32554): 6.3e-57 Smith-Waterman score: 889; 100.0% identity (100.0% similar) in 131 aa overlap (88-218:1-131) 60 70 80 90 100 110 pF1KE5 PAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAF :::::::::::::::::::::::::::::: CCDS77 MIDQAHQEERPIRQILYLGDLLETCHFQAF 10 20 30 120 130 140 150 160 170 pF1KE5 WQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 WQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKY 40 50 60 70 80 90 180 190 200 210 pF1KE5 GWSADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASSQ ::::::::::::::::::::::::::::::::::::::::: CCDS77 GWSADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASSQ 100 110 120 130 218 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 23:18:32 2016 done: Mon Nov 7 23:18:32 2016 Total Scan time: 1.400 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]