FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5626, 483 aa 1>>>pF1KE5626 483 - 483 aa - 483 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3971+/-0.000386; mu= 13.6155+/- 0.024 mean_var=111.3360+/-21.688, 0's: 0 Z-trim(115.1): 157 B-trim: 392 in 1/54 Lambda= 0.121550 statistics sampled from 25155 (25338) to 25155 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.297), width: 16 Scan time: 7.860 The best scores are: opt bits E(85289) NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455) 1226 226.1 1.7e-58 NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 879 165.4 5.3e-40 NP_076977 (OMIM: 611665) ATP-dependent RNA helicas ( 881) 757 144.0 1.6e-33 NP_001104792 (OMIM: 611665) ATP-dependent RNA heli ( 882) 757 144.0 1.6e-33 NP_957518 (OMIM: 615428) probable ATP-dependent RN ( 406) 749 142.4 2.3e-33 NP_004389 (OMIM: 601235) probable ATP-dependent RN ( 875) 701 134.2 1.4e-30 NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 691 132.4 4.2e-30 NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 691 132.4 4.2e-30 XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 687 131.7 7.1e-30 XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 687 131.8 8.3e-30 XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 687 131.8 8.3e-30 NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 687 131.8 8.3e-30 NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 687 131.8 8.3e-30 NP_006764 (OMIM: 606355) ATP-dependent RNA helicas ( 670) 682 130.8 1.2e-29 NP_542165 (OMIM: 142560) spliceosome RNA helicase ( 428) 673 129.1 2.5e-29 NP_004631 (OMIM: 142560) spliceosome RNA helicase ( 428) 673 129.1 2.5e-29 NP_055555 (OMIM: 268305,608546) eukaryotic initiat ( 411) 666 127.8 5.6e-29 XP_011522561 (OMIM: 613369) PREDICTED: ATP-depende ( 674) 660 126.9 1.7e-28 NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 650 125.2 5.3e-28 NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 650 125.2 5.3e-28 NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 650 125.2 5.3e-28 NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 650 125.2 5.3e-28 NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575) 635 122.5 3.1e-27 XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678) 635 122.6 3.6e-27 NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690) 635 122.6 3.6e-27 XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698) 635 122.6 3.7e-27 NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704) 635 122.6 3.7e-27 NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724) 635 122.6 3.8e-27 NP_001407 (OMIM: 602641) eukaryotic initiation fac ( 406) 629 121.3 5e-27 XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 623 120.3 1.1e-26 XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 623 120.4 1.3e-26 XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 623 120.4 1.3e-26 XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 623 120.4 1.4e-26 NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 623 120.4 1.5e-26 NP_001958 (OMIM: 601102) eukaryotic initiation fac ( 407) 605 117.1 9.2e-26 XP_016857921 (OMIM: 174300,615464) PREDICTED: prob ( 619) 601 116.6 2.1e-25 XP_016857920 (OMIM: 174300,615464) PREDICTED: prob ( 619) 601 116.6 2.1e-25 NP_001026895 (OMIM: 174300,615464) probable ATP-de ( 619) 601 116.6 2.1e-25 XP_011508337 (OMIM: 174300,615464) PREDICTED: prob ( 619) 601 116.6 2.1e-25 XP_005271474 (OMIM: 600326) PREDICTED: probable AT ( 483) 586 113.9 1.1e-24 NP_001244120 (OMIM: 600326) probable ATP-dependent ( 483) 586 113.9 1.1e-24 NP_004388 (OMIM: 600326) probable ATP-dependent RN ( 483) 586 113.9 1.1e-24 NP_001308661 (OMIM: 608170,616871) probable ATP-de ( 496) 560 109.3 2.5e-23 NP_001308759 (OMIM: 608170,616871) probable ATP-de ( 496) 560 109.3 2.5e-23 NP_057306 (OMIM: 608170,616871) probable ATP-depen ( 622) 560 109.4 3e-23 NP_009135 (OMIM: 606168) probable ATP-dependent RN ( 824) 553 108.2 8.9e-23 NP_001278405 (OMIM: 612500) probable ATP-dependent ( 491) 535 104.9 5.3e-22 XP_011522534 (OMIM: 612500) PREDICTED: probable AT ( 581) 535 105.0 6e-22 NP_008941 (OMIM: 612500) probable ATP-dependent RN ( 599) 535 105.0 6.2e-22 NP_001307110 (OMIM: 174300,615464) probable ATP-de ( 567) 532 104.4 8.5e-22 >>NP_057439 (OMIM: 615428) probable ATP-dependent RNA he (455 aa) initn: 1219 init1: 597 opt: 1226 Z-score: 1171.4 bits: 226.1 E(85289): 1.7e-58 Smith-Waterman score: 1232; 44.6% identity (75.6% similar) in 439 aa overlap (4-442:26-453) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILE : .::... : : : ::: .:: .:. :: :. NP_057 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE5 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLG ::: .: :.::::::.::.::::. : : : .: ::::::::::.::.:::..::. .: NP_057 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE5 LKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLL ... .::::.: ..:.: :..:::..::::::: :::.... :... ...::::::::.: NP_057 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE5 EQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQ .. :: .... :: ..: :.:.:::::.: ...:: : ..: ... .:::. NP_057 NM---DFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 190 200 210 220 230 220 230 240 250 260 270 pF1KE5 LDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVAL :.: :...: : ::.:::...... . :..:: .::.. : ..::...: .. : NP_057 LQQYYIFIPSKFKDTYLVYILNELAGN----SFMIFCSTCNNTQRTALLLRNLGFTAIPL 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE5 HSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGR :..:.:..:...: :::.. ::.:::::::::::: :.::.: . : : ::::::: NP_057 HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGR 300 310 320 330 340 350 340 350 360 370 380 390 pF1KE5 TARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIK ::::::.:.:::.:::::..: . ::. : ::: : ... ::... .: ..: ... NP_057 TARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARME 360 370 380 390 400 410 400 410 420 430 440 450 pF1KE5 LEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRRFKEKVEETLKRQKAGR :. : ..:: . .. .. : . . ..: :.:.:. NP_057 LRE-HGEKKK---RSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR 420 430 440 450 460 470 480 pF1KE5 AGHKGRPPRTPSGSHSGPVPSQGLV >>NP_060365 (OMIM: 616621) probable ATP-dependent RNA he (796 aa) initn: 739 init1: 286 opt: 879 Z-score: 839.1 bits: 165.4 E(85289): 5.3e-40 Smith-Waterman score: 879; 33.0% identity (65.6% similar) in 488 aa overlap (4-480:220-697) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCI : ...:: :.. .:.:::::.: .:: NP_060 KVKDRKKKKKKGQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACI 190 200 210 220 230 240 40 50 60 70 80 90 pF1KE5 PAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGI---FCLVLTPTRELAYQIAEQF :. : :.: .:: ::.::::::.::.:..: : :::.:::::. :. NP_060 PVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVT 250 260 270 280 290 300 100 110 120 130 140 150 pF1KE5 RVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLV : :.. .. :. :::.:. .: : : ..::::::: :::.. .: ...:. :. NP_060 RQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLI 310 320 330 340 350 360 160 170 180 190 200 210 pF1KE5 MDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQ .:::::.:.. : ... :. .:::.:::::.:: ...: ... ..: .. NP_060 LDEADRMLDEY---FEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVN 370 380 390 400 410 420 220 230 240 250 260 pF1KE5 APVSTVEQLDQRYLLV-PEKVKD--AYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMM . .... : :... . :.. : : .. :. : .: ...::.: : . . .. NP_060 SNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDH----VMLFTQTKKQAHRMHIL 430 440 450 460 470 480 270 280 290 300 310 320 pF1KE5 LRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPG : ... . ::. ..: .:. :: .::. ::.:::::.::::: :..::: . :. NP_060 LGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPN 490 500 510 520 530 540 330 340 350 360 370 380 pF1KE5 LPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQ : :.::::::::::: :....:: . . .... : . : .. . . .:.. . NP_060 TIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAAKAPVKARILPQDVILKFRDK 550 560 570 580 590 600 390 400 410 420 430 440 pF1KE5 VNVVRRECE--IKLEAAHFDEKK---EINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR .. .... ..::: . . .. .:: :.:. .::. .. . : . .. :..: NP_060 IEKMEKDVYAVLQLEAEEKEMQQSEAQINTAKRLLEKGKEAVVQ---EPERSWFQTKEER 610 620 630 640 650 450 460 470 480 pF1KE5 FKEKVEETLKRQKAGRAGHKGRPPRTPSGSHSGPVPSQGLV :::. ..:.. . :.: : .....: . .. NP_060 KKEKIAKALQEFDLALRGKKKRKKFMKDAKKKGEMTAEERSQFEILKAQMFAERLAKRNR 660 670 680 690 700 710 NP_060 RAKRARAMPEEEPVRGPAKKQKQGKKSVFDEELTNTSKKALKQYRAGPSFEERKQLGLPH 720 730 740 750 760 770 >>NP_076977 (OMIM: 611665) ATP-dependent RNA helicase DD (881 aa) initn: 717 init1: 214 opt: 757 Z-score: 722.9 bits: 144.0 E(85289): 1.6e-33 Smith-Waterman score: 757; 37.8% identity (63.3% similar) in 384 aa overlap (3-375:97-471) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGC :: .::: . . . : : :::.: NP_076 TFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKT 70 80 90 100 110 120 40 50 60 70 80 90 pF1KE5 IPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY--GIFCLVLTPTRELAYQIAEQF ::.::.:.: .. :.::::::: :.::....:. : :.:.:::::: : . NP_076 IPVILDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFT 130 140 150 160 170 180 100 110 120 130 140 150 pF1KE5 RVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLV . ::: ::: .:.:: : : : ..: ..:::::::. :. ..........: NP_076 KELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEYVV 190 200 210 220 230 240 160 170 180 190 200 210 pF1KE5 MDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQ .::::::.:.: :. .:. :.: .:. .::.:::::: : :. . ..: . . . NP_076 FDEADRLFEMG---FAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLD 250 260 270 280 290 300 220 230 240 250 260 pF1KE5 APVSTVEQLDQRYLLVPEKVKDAYLVHLIQ---RFQDEHEDWSIIIFTNTCKTCQILCMM . .. ::: ..:: : .: : :.::.. : ::. ..:. : . . : . NP_076 VDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVVRPQDQ-----TVVFVATKHHAEYLTEL 310 320 330 340 350 270 280 290 300 310 320 pF1KE5 LRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPG : . ..: . : :::: . ::.::.:.:::::: .. :::.. :. NP_076 LTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPA 360 370 380 390 400 410 330 340 350 360 370 380 pF1KE5 LPKIYIHRVGRTARAGRQGQAITLVTQ------YDIHLVHAIEEQIKKKLEEFSVEEAEV :...:::::.:::::.: : .::. :.:: . . . :.: : NP_076 KGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVD 420 430 440 450 460 470 390 400 410 420 430 440 pF1KE5 LQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNR NP_076 GMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEM 480 490 500 510 520 530 >>NP_001104792 (OMIM: 611665) ATP-dependent RNA helicase (882 aa) initn: 717 init1: 214 opt: 757 Z-score: 722.9 bits: 144.0 E(85289): 1.6e-33 Smith-Waterman score: 757; 37.8% identity (63.3% similar) in 384 aa overlap (3-375:97-471) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGC :: .::: . . . : : :::.: NP_001 TFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKT 70 80 90 100 110 120 40 50 60 70 80 90 pF1KE5 IPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY--GIFCLVLTPTRELAYQIAEQF ::.::.:.: .. :.::::::: :.::....:. : :.:.:::::: : . NP_001 IPVILDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFT 130 140 150 160 170 180 100 110 120 130 140 150 pF1KE5 RVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLV . ::: ::: .:.:: : : : ..: ..:::::::. :. ..........: NP_001 KELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEYVV 190 200 210 220 230 240 160 170 180 190 200 210 pF1KE5 MDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQ .::::::.:.: :. .:. :.: .:. .::.:::::: : :. . ..: . . . NP_001 FDEADRLFEMG---FAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLD 250 260 270 280 290 300 220 230 240 250 260 pF1KE5 APVSTVEQLDQRYLLVPEKVKDAYLVHLIQ---RFQDEHEDWSIIIFTNTCKTCQILCMM . .. ::: ..:: : .: : :.::.. : ::. ..:. : . . : . NP_001 VDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVVRPQDQ-----TVVFVATKHHAEYLTEL 310 320 330 340 350 270 280 290 300 310 320 pF1KE5 LRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPG : . ..: . : :::: . ::.::.:.:::::: .. :::.. :. NP_001 LTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPA 360 370 380 390 400 410 330 340 350 360 370 380 pF1KE5 LPKIYIHRVGRTARAGRQGQAITLVTQ------YDIHLVHAIEEQIKKKLEEFSVEEAEV :...:::::.:::::.: : .::. :.:: . . . :.: : NP_001 KGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVD 420 430 440 450 460 470 390 400 410 420 430 440 pF1KE5 LQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNR NP_001 GMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEM 480 490 500 510 520 530 >>NP_957518 (OMIM: 615428) probable ATP-dependent RNA he (406 aa) initn: 1077 init1: 588 opt: 749 Z-score: 720.0 bits: 142.4 E(85289): 2.3e-33 Smith-Waterman score: 1007; 40.8% identity (66.5% similar) in 439 aa overlap (4-442:26-404) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILE : .::... : : : ::: .:: .:. :: :. NP_957 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE5 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLG ::: .: :.::::::.::.::::. : : : .: ::::::::::.::.:::..::. .: NP_957 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE5 LKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLL ... .::::.: ..:.: :..:::..::::::: :::.... :... ...::::::::.: NP_957 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE5 EQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQ .. :: .... :: ..: :.:.:::::.: ...:: : ..: ... .:::. NP_957 NM---DFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 190 200 210 220 230 220 230 240 250 260 270 pF1KE5 LDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVAL :.: :...: : :. NP_957 LQQYYIFIPSKFKS---------------------------------------------- 240 250 280 290 300 310 320 330 pF1KE5 HSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGR .:...: :::.. ::.:::::::::::: :.::.: . : : ::::::: NP_957 -------KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGR 260 270 280 290 300 340 350 360 370 380 390 pF1KE5 TARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIK ::::::.:.:::.:::::..: . ::. : ::: : ... ::... .: ..: ... NP_957 TARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARME 310 320 330 340 350 360 400 410 420 430 440 450 pF1KE5 LEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRRFKEKVEETLKRQKAGR :. : ..:: . .. .. : . . ..: :.:.:. NP_957 LRE-HGEKKK---RSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR 370 380 390 400 460 470 480 pF1KE5 AGHKGRPPRTPSGSHSGPVPSQGLV >>NP_004389 (OMIM: 601235) probable ATP-dependent RNA he (875 aa) initn: 447 init1: 223 opt: 701 Z-score: 669.8 bits: 134.2 E(85289): 1.4e-30 Smith-Waterman score: 701; 30.2% identity (61.3% similar) in 483 aa overlap (4-470:71-539) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCI :... ::. .. .. . : .: : NP_004 LKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTI 50 60 70 80 90 100 40 50 60 70 80 pF1KE5 PAILEGRDCLGCAKTGSGKTAAFVLPILQKL------SEDPYGIFCLVLTPTRELAYQIA :.:.: :: :::::::: ::..:.:. : : : :. :...:::::::: NP_004 GLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGV--LIISPTRELAYQTF 110 120 130 140 150 90 100 110 120 130 140 pF1KE5 EQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIR : .: .:: .. .:.:: :. .: ... . .... ::::: .:. . .: .. NP_004 EVLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQ 160 170 180 190 200 210 150 160 170 180 190 200 pF1KE5 FLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQP-FF .::.:::::.:..: .: ..:.. .: .::::::::: : ....: :. ..: . NP_004 MLVLDEADRILDMGFAD---TMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYV 220 230 240 250 260 270 210 220 230 240 250 260 pF1KE5 W-EAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILC : . .: :: :.: :.. . : . .. : : . :.: ..:: : : NP_004 WVHEKAKYSTPATLEQNYIVCELQQK----ISVLYSFLRSHLKKKSIVFFSSCKEVQYLY 280 290 300 310 320 330 270 280 290 300 310 320 pF1KE5 MMLRKFSFPTV---ALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVIN .. .. : : :::. ..: .:. . .: . .:.:::.:.::::.:.:. :.. NP_004 RVFCRLR-PGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQ 340 350 360 370 380 330 340 350 360 370 380 pF1KE5 HNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVL . : . ::::.::::: ..:.:. .. . .:. . : : ..:.... ... NP_004 FDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLL-QKKVPVKEIKINPEKLI 390 400 410 420 430 440 390 400 410 420 430 pF1KE5 QILTQV-NVVRRECEIKLEAAH----FDEKKEINKRKQLILEGKDPDLEAKRKAELAKIK .. .. ... .. ..: .: . . .. . : :... .: : : . :: NP_004 DVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAP 450 460 470 480 490 500 440 450 460 470 480 pF1KE5 QKNRRFKEKVEETLKRQKAGRAGHKGRPPRTPSGSHSGPVPSQGLV . :: .:... .. . . : ::.:: NP_004 R--VRFLQKMQKQPTKELVRSQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRL 510 520 530 540 550 560 NP_004 EGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAKGSQAPSLPNTSEAQKIKEVPTQFLDR 570 580 590 600 610 620 >>NP_006377 (OMIM: 608469) probable ATP-dependent RNA he (729 aa) initn: 623 init1: 272 opt: 691 Z-score: 661.5 bits: 132.4 E(85289): 4.2e-30 Smith-Waterman score: 691; 37.5% identity (65.9% similar) in 352 aa overlap (24-365:193-539) 10 20 30 40 50 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKT .:::.: .: : ::: .: :.:::::: NP_006 GDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKT 170 180 190 200 210 220 60 70 80 90 100 pF1KE5 AAFVLPILQKLSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGM :..:: . .....:: : .::::.:::::: :. . :: ::. : :: NP_006 LAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGA 230 240 250 260 270 280 110 120 130 140 150 160 pF1KE5 DMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVD : .: : .. ::::::: : :.:..: .... .::.:::::.:..: : . NP_006 PKGPQIRDLERGVEICIATPGRLIDFLESGKT-NLRRCTYLVLDEADRMLDMG---FEPQ 290 300 310 320 330 170 180 190 200 210 220 pF1KE5 LEAILAAVPARRQTLLFSATLTDTLREL-QGLATNQPFFWEAQAPVSTVEQLDQRYLLVP .. :. . ::::..::: .:.: . . . . .. .:. ... : . NP_006 IRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM 340 350 360 370 380 390 230 240 250 260 270 280 pF1KE5 EKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKER :. :: :..:..... :.:. .:: :..: . :. : .:. ..:.. .:. .: :: NP_006 ESEKDHKLIQLMEEIMAEKENKTII-FVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPER 400 410 420 430 440 450 290 300 310 320 330 340 pF1KE5 FAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQ .: .:.:. :::::::::::::. :. :::.. :. . :.::.:::::. .: NP_006 DWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGT 460 470 480 490 500 510 350 360 370 380 390 400 pF1KE5 AITLVTQYDIH----LVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAH : :. : ... :....:: NP_006 AYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRSRYRTTSSANNPN 520 530 540 550 560 570 >>NP_001091974 (OMIM: 608469) probable ATP-dependent RNA (731 aa) initn: 623 init1: 272 opt: 691 Z-score: 661.5 bits: 132.4 E(85289): 4.2e-30 Smith-Waterman score: 692; 32.3% identity (61.4% similar) in 461 aa overlap (24-475:193-633) 10 20 30 40 50 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKT .:::.: .: : ::: .: :.:::::: NP_001 GDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKT 170 180 190 200 210 220 60 70 80 90 100 pF1KE5 AAFVLPILQKLSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGM :..:: . .....:: : .::::.:::::: :. . :: ::. : :: NP_001 LAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGA 230 240 250 260 270 280 110 120 130 140 150 160 pF1KE5 DMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVD : .: : .. ::::::: : :.:..: .... .::.:::::.:..: : . NP_001 PKGPQIRDLERGVEICIATPGRLIDFLESGKT-NLRRCTYLVLDEADRMLDMG---FEPQ 290 300 310 320 330 170 180 190 200 210 220 pF1KE5 LEAILAAVPARRQTLLFSATLTDTLREL-QGLATNQPFFWEAQAPVSTVEQLDQRYLLVP .. :. . ::::..::: .:.: . . . . .. .:. ... : . NP_001 IRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM 340 350 360 370 380 390 230 240 250 260 270 280 pF1KE5 EKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKER :. :: :..:..... :.:. . :::..: . :. : .:. ..:.. .:. .: :: NP_001 ESEKDHKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPER 400 410 420 430 440 450 290 300 310 320 330 340 pF1KE5 FAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQ .: .:.:. :::::::::::::. :. :::.. :. . :.::.:::::. .: NP_001 DWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGT 460 470 480 490 500 510 350 360 370 380 390 400 pF1KE5 AITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEK : :. : ... .: :: : .. . ...:.. . ... NP_001 AYTFFTPGNLK---QARELIKVLEEANQAINPKLMQLVDH------------RGGGGGGG 520 530 540 550 560 410 420 430 440 450 460 pF1KE5 KEINKRKQLILEGKDPDLEAKRKAE--LAKIKQKNRRFKEKVEETLKRQKAGRAGHKGR- : .: . ...:.: . . . : .:. .:: . . .. . ..:: :. .: NP_001 KGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYG 570 580 590 600 610 620 470 480 pF1KE5 PPRTPSGSHSGPVPSQGLV : . :...: NP_001 SPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFS 630 640 650 660 670 680 >>XP_016879601 (OMIM: 613369) PREDICTED: ATP-dependent R (775 aa) initn: 671 init1: 235 opt: 687 Z-score: 657.3 bits: 131.7 E(85289): 7.1e-30 Smith-Waterman score: 687; 33.8% identity (64.6% similar) in 390 aa overlap (2-379:90-473) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLG ..::..:.. :..: :. ::::.: XP_016 EITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQ 60 70 80 90 100 110 40 50 60 70 80 pF1KE5 CIPAILEGRDCLGCAKTGSGKTAAFVLPIL-----QKLSEDPYGIFCLVLTPTRELAYQI .:. : ::: .: :::::::::::. :.: :: : : . ... ::::: :: XP_016 GVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQI 120 130 140 150 160 170 90 100 110 120 130 140 pF1KE5 AEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKI . . .:: .:.. . :: .: :: :.. ..:. ::::: ::.... : ..... XP_016 HAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKAT-NLQRV 180 190 200 210 220 230 150 160 170 180 190 200 pF1KE5 RFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFF .::.:::::....: : ....: . : :::::::::. ...: .:. XP_016 SYLVFDEADRMFDMG---FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIR 240 250 260 270 280 290 210 220 230 240 250 260 pF1KE5 WEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCM .:. .. ... : .. . . : .:. . . :...:.. . . : XP_016 V-VQGDIGEANE-DVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 300 310 320 330 340 350 270 280 290 300 310 320 pF1KE5 MLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTP :.. . ::. : :.:: ... ::.. .:.:::::.::::::....:::... XP_016 NLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVA 360 370 380 390 400 410 330 340 350 360 370 pF1KE5 GLPKIYIHRVGRTARAGRQGQAITLVTQYDIH----LVHAIE---EQIKKKLEEFSVEEA . ::.:::.:::..: : ::.: : . ::. .: ....:.: ......: XP_016 RDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNA 420 430 440 450 460 470 380 390 400 410 420 430 pF1KE5 EVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQK XP_016 WFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRL 480 490 500 510 520 530 >>XP_016879600 (OMIM: 613369) PREDICTED: ATP-dependent R (938 aa) initn: 671 init1: 235 opt: 687 Z-score: 656.2 bits: 131.8 E(85289): 8.3e-30 Smith-Waterman score: 687; 33.8% identity (64.6% similar) in 390 aa overlap (2-379:253-636) 10 20 30 pF1KE5 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLG ..::..:.. :..: :. ::::.: XP_016 EITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQ 230 240 250 260 270 280 40 50 60 70 80 pF1KE5 CIPAILEGRDCLGCAKTGSGKTAAFVLPIL-----QKLSEDPYGIFCLVLTPTRELAYQI .:. : ::: .: :::::::::::. :.: :: : : . ... ::::: :: XP_016 GVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQI 290 300 310 320 330 340 90 100 110 120 130 140 pF1KE5 AEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKI . . .:: .:.. . :: .: :: :.. ..:. ::::: ::.... : ..... XP_016 HAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKAT-NLQRV 350 360 370 380 390 400 150 160 170 180 190 200 pF1KE5 RFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFF .::.:::::....: : ....: . : :::::::::. ...: .:. XP_016 SYLVFDEADRMFDMG---FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIR 410 420 430 440 450 210 220 230 240 250 260 pF1KE5 WEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCM .:. .. ... : .. . . : .:. . . :...:.. . . : XP_016 V-VQGDIGEANE-DVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 460 470 480 490 500 510 270 280 290 300 310 320 pF1KE5 MLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTP :.. . ::. : :.:: ... ::.. .:.:::::.::::::....:::... XP_016 NLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVA 520 530 540 550 560 570 330 340 350 360 370 pF1KE5 GLPKIYIHRVGRTARAGRQGQAITLVTQYDIH----LVHAIE---EQIKKKLEEFSVEEA . ::.:::.:::..: : ::.: : . ::. .: ....:.: ......: XP_016 RDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNA 580 590 600 610 620 630 380 390 400 410 420 430 pF1KE5 EVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQK XP_016 WFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRL 640 650 660 670 680 690 483 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:18:13 2016 done: Tue Nov 8 05:18:14 2016 Total Scan time: 7.860 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]