Result of FASTA (omim) for
pFN21AE3122
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3122, 308 aa
1>>>pF1KE3122 308 - 308 aa - 308 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2639+/-0.000282; mu= 12.7181+/- 0.018
mean_var=105.3603+/-21.049, 0's: 0 Z-trim(120.8): 81 B-trim: 41 in 1/51
Lambda= 0.124950
statistics sampled from 36329 (36428) to 36329 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.771), E-opt: 0.2 (0.427), width: 16
Scan time: 8.470
The best scores are: opt bits E(85289)
NP_004855 (OMIM: 605312) growth/differentiation fa ( 308) 2104 389.1 6e-108
XP_011540326 (OMIM: 602284) PREDICTED: bone morpho ( 427) 294 62.9 1.3e-09
NP_001001557 (OMIM: 118100,601147,613094,613703,61 ( 455) 288 61.9 2.8e-09
NP_878248 (OMIM: 604651) growth/differentiation fa ( 450) 286 61.5 3.6e-09
NP_001483 (OMIM: 187500,208530,217095,602880,61385 ( 372) 280 60.4 6.6e-09
XP_016866687 (OMIM: 112265) PREDICTED: bone morpho ( 239) 272 58.8 1.3e-08
NP_001709 (OMIM: 112266) bone morphogenetic protei ( 513) 274 59.4 1.8e-08
NP_066551 (OMIM: 112265) bone morphogenetic protei ( 454) 272 59.0 2.1e-08
NP_001711 (OMIM: 602284) bone morphogenetic protei ( 402) 271 58.8 2.2e-08
NP_113667 (OMIM: 612031) inhibin beta E chain prep ( 350) 266 57.8 3.6e-08
NP_001710 (OMIM: 112267) bone morphogenetic protei ( 431) 266 57.9 4.2e-08
XP_011541613 (OMIM: 601918) PREDICTED: growth/diff ( 276) 249 54.7 2.5e-07
XP_011541611 (OMIM: 601918) PREDICTED: growth/diff ( 366) 249 54.8 3.1e-07
NP_001275757 (OMIM: 601918) growth/differentiation ( 366) 249 54.8 3.1e-07
XP_005272014 (OMIM: 601918) PREDICTED: growth/diff ( 366) 249 54.8 3.1e-07
XP_006714648 (OMIM: 601918) PREDICTED: growth/diff ( 366) 249 54.8 3.1e-07
NP_001275755 (OMIM: 601918) growth/differentiation ( 366) 249 54.8 3.1e-07
XP_011541612 (OMIM: 601918) PREDICTED: growth/diff ( 366) 249 54.8 3.1e-07
NP_001275754 (OMIM: 601918) growth/differentiation ( 366) 249 54.8 3.1e-07
NP_001275756 (OMIM: 601918) growth/differentiation ( 366) 249 54.8 3.1e-07
NP_001275753 (OMIM: 601918) growth/differentiation ( 366) 249 54.8 3.1e-07
NP_001316835 (OMIM: 270100,601265) nodal homolog i ( 214) 245 53.9 3.4e-07
XP_011527377 (OMIM: 112600,113100,200700,201250,22 ( 501) 250 55.0 3.5e-07
NP_000548 (OMIM: 112600,113100,200700,201250,22890 ( 501) 250 55.0 3.5e-07
NP_001306067 (OMIM: 112600,113100,200700,201250,22 ( 501) 250 55.0 3.5e-07
NP_005251 (OMIM: 601918) growth/differentiation fa ( 454) 249 54.8 3.7e-07
XP_011541610 (OMIM: 601918) PREDICTED: growth/diff ( 454) 249 54.8 3.7e-07
NP_060525 (OMIM: 270100,601265) nodal homolog isof ( 347) 245 54.0 4.9e-07
NP_057288 (OMIM: 605120,615506) growth/differentia ( 429) 244 53.9 6.6e-07
NP_004953 (OMIM: 601361) growth/differentiation fa ( 478) 236 52.5 2e-06
NP_003229 (OMIM: 190220,614816) transforming growt ( 414) 235 52.3 2e-06
NP_001129071 (OMIM: 190220,614816) transforming gr ( 442) 235 52.3 2.1e-06
XP_016877094 (OMIM: 112262,600625,607932) PREDICTE ( 345) 232 51.7 2.5e-06
XP_016877093 (OMIM: 112262,600625,607932) PREDICTE ( 345) 232 51.7 2.5e-06
NP_001192 (OMIM: 112263) bone morphogenetic protei ( 472) 233 52.0 2.8e-06
NP_001193 (OMIM: 112262,600625,607932) bone morpho ( 408) 232 51.7 2.8e-06
NP_570911 (OMIM: 112262,600625,607932) bone morpho ( 408) 232 51.7 2.8e-06
XP_016877092 (OMIM: 112262,600625,607932) PREDICTE ( 408) 232 51.7 2.8e-06
XP_005268072 (OMIM: 112262,600625,607932) PREDICTE ( 408) 232 51.7 2.8e-06
NP_065685 (OMIM: 606522,613702,613703,613704) grow ( 364) 230 51.3 3.3e-06
NP_005529 (OMIM: 601233) inhibin beta C chain prep ( 352) 225 50.4 6.1e-06
NP_001316868 (OMIM: 107970,190230,615582) transfor ( 412) 223 50.1 8.8e-06
NP_003230 (OMIM: 107970,190230,615582) transformin ( 412) 223 50.1 8.8e-06
NP_005439 (OMIM: 300247,300510) bone morphogenetic ( 392) 221 49.7 1.1e-05
NP_000651 (OMIM: 131300,190180,219700) transformin ( 390) 219 49.4 1.4e-05
XP_011525544 (OMIM: 131300,190180,219700) PREDICTE ( 391) 219 49.4 1.4e-05
XP_016867665 (OMIM: 147290) PREDICTED: inhibin bet ( 426) 218 49.2 1.7e-05
NP_002183 (OMIM: 147290) inhibin beta A chain prep ( 426) 218 49.2 1.7e-05
XP_016867664 (OMIM: 147290) PREDICTED: inhibin bet ( 483) 218 49.3 1.9e-05
XP_016867663 (OMIM: 147290) PREDICTED: inhibin bet ( 548) 218 49.3 2.1e-05
>>NP_004855 (OMIM: 605312) growth/differentiation factor (308 aa)
initn: 2104 init1: 2104 opt: 2104 Z-score: 2059.1 bits: 389.1 E(85289): 6e-108
Smith-Waterman score: 2104; 99.7% identity (100.0% similar) in 308 aa overlap (1-308:1-308)
10 20 30 40 50 60
pF1KE3 MPGQELRTVNGSQMLLVLLVLSWLPHGGALSLAEASRASFPGPSELHTEDSRFRELRKRY
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_004 MPGQELRTVNGSQMLLVLLVLSWLPHGGALSLAEASRASFPGPSELHSEDSRFRELRKRY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EDLLTRLRANQSWEDSNTDLVPAPAVRILTPEVRLGSGGHLHLRISRAALPEGLPEASRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EDLLTRLRANQSWEDSNTDLVPAPAVRILTPEVRLGSGGHLHLRISRAALPEGLPEASRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 HRALFRLSPTASRSWDVTRPLRRQLSLARPQAPALHLRLSPPPSQSDQLLAESSSARPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HRALFRLSPTASRSWDVTRPLRRQLSLARPQAPALHLRLSPPPSQSDQLLAESSSARPQL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ELHLRPQAARGRRRARARNGDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ELHLRPQAARGRRRARARNGDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 IGACPSQFRAANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMVLIQKTDTGVSLQTYDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IGACPSQFRAANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMVLIQKTDTGVSLQTYDDL
250 260 270 280 290 300
pF1KE3 LAKDCHCI
::::::::
NP_004 LAKDCHCI
>>XP_011540326 (OMIM: 602284) PREDICTED: bone morphogene (427 aa)
initn: 250 init1: 110 opt: 294 Z-score: 293.7 bits: 62.9 E(85289): 1.3e-09
Smith-Waterman score: 294; 28.7% identity (51.5% similar) in 307 aa overlap (21-307:132-426)
10 20 30 40
pF1KE3 MPGQELRTVNGSQMLLVLLVLSWLPHGGALSLAEASRASFPGPSELHT--
:. .: : :.. :: . :. :.
XP_011 ADLVMSFVNMVERDRALGHQEPHWKEFRFDLTQIPAGEAVTAAEFRIYKVPSIHLLNRTL
110 120 130 140 150 160
50 60 70 80 90 100
pF1KE3 EDSRFR---ELRKRYEDL----LTRLRA-NQSWEDSNTDLVPAPAVRILTPEVRLGSGGH
. : :. : .: :: : ::: ...: :.. : .: . :: .
XP_011 HVSMFQVVQEQSNRESDLFFLDLQTLRAGDEGW--LVLDVTAASDCWLLKRHKDLGLRLY
170 180 190 200 210
110 120 130 140 150
pF1KE3 LHLRISRAALPEGLPEASRLHRALFRLSPTASRSWDVT--RPLRRQLSLARPQAPAL--H
.. . ... : . :::. .::: : : .. : : :: : :
XP_011 VETEDGETWTGWGWTKDSRLQMWKLRLSRTP---WVLSLHAPGPAQAPAERPLLCLLQGH
220 230 240 250 260 270
160 170 180 190 200 210
pF1KE3 LRLSPPPSQSDQLLAESSSARPQLELHLRPQAARGRRRARARNGDHCPLGPGR-CCRLHT
:: : .. . . .:. .: ::: : .:.: :: :: :
XP_011 CPASPSPIRTPRAVRPLRRRQPKKSNEL-PQANRLPGIFDDVHGSH-----GRQVCRRHE
280 290 300 310 320 330
220 230 240 250 260 270
pF1KE3 VRASLEDLGWADWVLSPREVQVTMCIGAC--P--SQFRAANMHAQIKTSLHRLKPDTVPA
. .:..:::: :::..:. .. .: : : : : . :.: :: ... .: . ::.::
XP_011 LYVSFQDLGWLDWVIAPQGYSAYYCEGECSFPLDSCMNATN-HAILQSLVHLMMPDAVPK
340 350 360 370 380
280 290 300
pF1KE3 PCCVPASYNPM-VLIQKTDTGVSLQTYDDLLAKDCHCI
::.:.. . :: ....: :. . ....: : :
XP_011 ACCAPTKLSATSVLYYDSSNNVILRKHRNMVVKACGCH
390 400 410 420
>>NP_001001557 (OMIM: 118100,601147,613094,613703,615360 (455 aa)
initn: 227 init1: 99 opt: 288 Z-score: 287.5 bits: 61.9 E(85289): 2.8e-09
Smith-Waterman score: 288; 28.9% identity (60.3% similar) in 194 aa overlap (122-307:275-454)
100 110 120 130 140 150
pF1KE3 EVRLGSGGHLHLRISRAALPEGLPEASRLHRALFRLSPTASRSWDVTRPLRRQLSLARPQ
:::. . ..:. .. .:.::. :.
NP_001 AEARARGPQQPPPPDLRSLGFGRRVRPPQERALLVVFTRSQRK-NLFAEMREQLGSAEAA
250 260 270 280 290 300
160 170 180 190 200
pF1KE3 APALHLRLS-PPPSQSDQLLAESSSARPQLELHLRPQAARGRRRAR--ARNGD-HCPLGP
.:. . : :::: . . ::: : :. .: :::. .:.: : .
NP_001 GPGAGAEGSWPPPSGAPD-------ARPWL-----PSPGRRRRRTAFASRHGKRHGKKSR
310 320 330 340 350
210 220 230 240 250 260
pF1KE3 GRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---ANMHAQIKTSLHRL
:: . . .......::: ::...: : .. : :.: .:. . :: :.: .. .
NP_001 LRCSK-KPLHVNFKELGWDDWIIAPLEYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSM
360 370 380 390 400 410
270 280 290 300
pF1KE3 KPDTVPAPCCVPASYNPM-VLIQKTDTGVSLQTYDDLLAKDCHCI
: ..: ::::.. .:. .: . ..: . :.:.....: :
NP_001 DPGSTPPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCGCR
420 430 440 450
>>NP_878248 (OMIM: 604651) growth/differentiation factor (450 aa)
initn: 221 init1: 119 opt: 286 Z-score: 285.6 bits: 61.5 E(85289): 3.6e-09
Smith-Waterman score: 286; 29.1% identity (58.3% similar) in 206 aa overlap (111-307:255-449)
90 100 110 120 130 140
pF1KE3 VPAPAVRILTPEVRLGSGGHLHLRISRAALPEGLPEASRLHRALFRLSPTASRSWDVTRP
: : :.. .::.. .: ..:. .. :
NP_878 RPPRAFCLLLRAVAGPVPSPLALRRLGFGWPGGGGSAAE-ERAVLVVSSRTQRKESLFRE
230 240 250 260 270 280
150 160 170 180 190
pF1KE3 LRRQLSLARPQAPALHLRLSPPPSQSDQLLAESSSARPQLELHLRPQAA-RGRRRARARN
.: : :: . :: . : :. . ..: : . . : ..: : : :.. .
NP_878 IRAQ---ARALGAALASEPLPDPGTG------TASPRAVIGGRRRRRTALAGTRTAQGSG
290 300 310 320 330
200 210 220 230 240 250
pF1KE3 GD----HCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---AN
: : : .:: : . .......::: ::...: . .. : : : .:. .
NP_878 GGAGRGHGRRGRSRCSR-KPLHVDFKELGWDDWIIAPLDYEAYHCEGLCDFPLRSHLEPT
340 350 360 370 380 390
260 270 280 290 300
pF1KE3 MHAQIKTSLHRLKPDTVPAPCCVPASYNPM-VLIQKTDTGVSLQTYDDLLAKDCHCI
:: :.: :. . ::..:: ::::: .:. .: . ..: . :.:.... : :
NP_878 NHAIIQTLLNSMAPDAAPASCCVPARLSPISILYIDAANNVVYKQYEDMVVEACGCR
400 410 420 430 440 450
>>NP_001483 (OMIM: 187500,208530,217095,602880,613854) e (372 aa)
initn: 241 init1: 107 opt: 280 Z-score: 280.9 bits: 60.4 E(85289): 6.6e-09
Smith-Waterman score: 286; 33.0% identity (54.9% similar) in 182 aa overlap (134-307:208-371)
110 120 130 140 150 160
pF1KE3 RISRAALPEGLPEASRLHRALFRLSPTASRSWDVTRPLRRQLSLARPQAPALHLRLSPPP
:: : :: :.: ::.::: ::
NP_001 PGPVLLRQLVPALGPPVRAELLGAAWARNASWP--RSLRLALAL-RPRAPAACARL----
180 190 200 210 220 230
170 180 190 200 210 220
pF1KE3 SQSDQLLAESSSARPQLELHLRPQAARGRRRARARNGDHCPLGPGRCCRLHTVRASLEDL
::.: :. .: :: :: :. : ::: :: . . .:....
NP_001 -------AEASLLLVTLDPRLCHPLARPRRDAEPVLGG----GPGGACRARRLYVSFREV
240 250 260 270
230 240 250 260 270
pF1KE3 GWADWVLSPREVQVTMCIGAC--PSQFRAAN-----MHAQIKTSLHRLKPDTVPAPCCVP
:: ::..:: ...: : : : . ... :: ... .: : .. :::::
NP_001 GWHRWVIAPRGFLANYCQGQCALPVALSGSGGPPALNHAVLRALMHAAAPGAADLPCCVP
280 290 300 310 320 330
280 290 300
pF1KE3 ASYNPM-VLIQKTDTGVSLQTYDDLLAKDCHCI
: .:. ::. .. .: :. :.:... .: :
NP_001 ARLSPISVLFFDNSDNVVLRQYEDMVVDECGCR
340 350 360 370
>>XP_016866687 (OMIM: 112265) PREDICTED: bone morphogene (239 aa)
initn: 224 init1: 111 opt: 272 Z-score: 275.8 bits: 58.8 E(85289): 1.3e-08
Smith-Waterman score: 272; 27.7% identity (60.8% similar) in 148 aa overlap (165-307:91-238)
140 150 160 170 180 190
pF1KE3 WDVTRPLRRQLSLARPQAPALHLRLSPPPSQSDQLLAESSSARPQLELHLRPQAARGRRR
.....: .: : . . . : ... .
XP_016 GDGRSINVKSAGLVGRQGPQSKQPFMVAFFKASEVLLRSVRAANKRKNQNRNKSSSHQDS
70 80 90 100 110 120
200 210 220 230 240 250
pF1KE3 ARARN-GDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---
.: . ::. . :. : . .:..:::: ::...:. . .: : : . :
XP_016 SRMSSVGDYNTSEQKQACKKHELYVSFRDLGWQDWIIAPEGYAAFYCDGECSFPLNAHMN
130 140 150 160 170 180
260 270 280 290 300
pF1KE3 ANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMVLIQKTDTG-VSLQTYDDLLAKDCHCI
:. :: ..: .: . :: :: :::.:.. : . .. :.. : :. : ......: :
XP_016 ATNHAIVQTLVHLMFPDHVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMVVRSCGCH
190 200 210 220 230
>>NP_001709 (OMIM: 112266) bone morphogenetic protein 6 (513 aa)
initn: 262 init1: 112 opt: 274 Z-score: 273.1 bits: 59.4 E(85289): 1.8e-08
Smith-Waterman score: 280; 30.8% identity (58.9% similar) in 146 aa overlap (181-307:367-512)
160 170 180 190
pF1KE3 QAPALHLRLSPPPSQSDQLLAESSSARPQLELHLRP-QAARGRRRARARN----------
:.:.: ..: .::: ..::
NP_001 VHVHPRAAGLVGRDGPYDKQPFMVAFFKVSEVHVRTTRSASSRRRQQSRNRSTQSQDVAR
340 350 360 370 380 390
200 210 220 230 240 250
pF1KE3 ----GDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---AN
.:. :: : . .:..:::: ::...:. ...: : : . : :.
NP_001 VSSASDYNSSELKTACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNAT
400 410 420 430 440 450
260 270 280 290 300
pF1KE3 MHAQIKTSLHRLKPDTVPAPCCVPASYNPM-VLIQKTDTGVSLQTYDDLLAKDCHCI
:: ..: .: ..:. :: :::.:.. : . :: ...: :. : ..... : :
NP_001 NHAIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGCH
460 470 480 490 500 510
>>NP_066551 (OMIM: 112265) bone morphogenetic protein 5 (454 aa)
initn: 242 init1: 111 opt: 272 Z-score: 271.9 bits: 59.0 E(85289): 2.1e-08
Smith-Waterman score: 272; 27.7% identity (60.8% similar) in 148 aa overlap (165-307:306-453)
140 150 160 170 180 190
pF1KE3 WDVTRPLRRQLSLARPQAPALHLRLSPPPSQSDQLLAESSSARPQLELHLRPQAARGRRR
.....: .: : . . . : ... .
NP_066 GDGRSINVKSAGLVGRQGPQSKQPFMVAFFKASEVLLRSVRAANKRKNQNRNKSSSHQDS
280 290 300 310 320 330
200 210 220 230 240 250
pF1KE3 ARARN-GDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---
.: . ::. . :. : . .:..:::: ::...:. . .: : : . :
NP_066 SRMSSVGDYNTSEQKQACKKHELYVSFRDLGWQDWIIAPEGYAAFYCDGECSFPLNAHMN
340 350 360 370 380 390
260 270 280 290 300
pF1KE3 ANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMVLIQKTDTG-VSLQTYDDLLAKDCHCI
:. :: ..: .: . :: :: :::.:.. : . .. :.. : :. : ......: :
NP_066 ATNHAIVQTLVHLMFPDHVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMVVRSCGCH
400 410 420 430 440 450
>>NP_001711 (OMIM: 602284) bone morphogenetic protein 8B (402 aa)
initn: 263 init1: 110 opt: 271 Z-score: 271.7 bits: 58.8 E(85289): 2.2e-08
Smith-Waterman score: 271; 31.7% identity (57.5% similar) in 167 aa overlap (149-307:242-401)
120 130 140 150 160 170
pF1KE3 RLHRALFRLSPTASRSWDVTRPLRRQLSLARPQAP--ALHLRLSPPPSQSDQLLAESSSA
: : : . .: :: : .. . .
NP_001 KDLGLRLYVETEDGHSVDPGLAGLLGQRAPRSQQPFVVTFFRASPSPIRTPRAVRPLRRR
220 230 240 250 260 270
180 190 200 210 220 230
pF1KE3 RPQLELHLRPQAARGRRRARARNGDHCPLGPGR-CCRLHTVRASLEDLGWADWVLSPREV
.:. .: ::: : .:.: :: :: : . .:..:::: :::..:.
NP_001 QPKKSNEL-PQANRLPGIFDDVHGSH-----GRQVCRRHELYVSFQDLGWLDWVIAPQGY
280 290 300 310 320
240 250 260 270 280 290
pF1KE3 QVTMCIGAC--P--SQFRAANMHAQIKTSLHRLKPDTVPAPCCVPASYNPM-VLIQKTDT
.. .: : : : : . :.: :: ... .: . ::.:: ::.:.. . :: ...
NP_001 SAYYCEGECSFPLDSCMNATN-HAILQSLVHLMMPDAVPKACCAPTKLSATSVLYYDSSN
330 340 350 360 370 380
300
pF1KE3 GVSLQTYDDLLAKDCHCI
.: :. . ....: : :
NP_001 NVILRKHRNMVVKACGCH
390 400
>>NP_113667 (OMIM: 612031) inhibin beta E chain prepropr (350 aa)
initn: 183 init1: 118 opt: 266 Z-score: 267.6 bits: 57.8 E(85289): 3.6e-08
Smith-Waterman score: 266; 31.5% identity (58.4% similar) in 149 aa overlap (165-307:204-349)
140 150 160 170 180 190
pF1KE3 WDVTRPLRRQLSLARPQAPALHLRLSPPPSQSDQLLAESSSARPQLELHLRPQAARGRRR
: .:: .. .: :::..: . : :
NP_113 PSSGLRGEKSGVLKLQLDCRPLEGNSTVTGQPRRLLDTAGHQQPFLELKIRANEP-GAGR
180 190 200 210 220 230
200 210 220 230 240
pF1KE3 ARARNGDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFR-----
:: :. : : : : : : ....::: ::.:.:. :...: : :: ..
NP_113 ARRRTPTCEPATPLCCRRDHYV--DFQELGWRDWILQPEGYQLNYCSGQCPPHLAGSPGI
240 250 260 270 280 290
250 260 270 280 290 300
pF1KE3 AANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMVLIQKTDTGVSLQT-YDDLLAKDCHCI
::..:. . . :. .: . . ::::.. :. :. .: ..: :.... : :
NP_113 AASFHSAVFSLLKANNPWPASTSCCVPTARRPLSLLYLDHNGNVVKTDVPDMVVEACGCS
300 310 320 330 340 350
308 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 02:24:01 2016 done: Sun Nov 6 02:24:02 2016
Total Scan time: 8.470 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]