Result of FASTA (omim) for
pFN21AE1735
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1735, 242 aa
1>>>pF1KE1735 242 - 242 aa - 242 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2575+/-0.000369; mu= 15.6272+/- 0.023
mean_var=78.2047+/-15.774, 0's: 0 Z-trim(113.5): 89 B-trim: 0 in 0/51
Lambda= 0.145030
statistics sampled from 22789 (22878) to 22789 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.268), width: 16
Scan time: 6.720
The best scores are: opt bits E(85289)
NP_036246 (OMIM: 605848) caspase-14 precursor [Hom ( 242) 1580 339.9 2.5e-93
XP_011526163 (OMIM: 605848) PREDICTED: caspase-14 ( 230) 1147 249.2 4.5e-66
NP_116786 (OMIM: 600636) caspase-3 preproprotein [ ( 277) 356 83.8 3.4e-16
XP_011530603 (OMIM: 600636) PREDICTED: caspase-3 i ( 277) 356 83.8 3.4e-16
NP_004337 (OMIM: 600636) caspase-3 preproprotein [ ( 277) 356 83.8 3.4e-16
XP_011538562 (OMIM: 601761) PREDICTED: caspase-7 i ( 270) 345 81.5 1.6e-15
NP_001253987 (OMIM: 601761) caspase-7 isoform f [H ( 278) 345 81.5 1.7e-15
NP_203125 (OMIM: 601761) caspase-7 isoform alpha p ( 303) 345 81.5 1.8e-15
NP_001253985 (OMIM: 601761) caspase-7 isoform alph ( 303) 345 81.5 1.8e-15
NP_001218 (OMIM: 601761) caspase-7 isoform alpha p ( 303) 345 81.5 1.8e-15
NP_001307840 (OMIM: 601761) caspase-7 isoform g [H ( 311) 345 81.5 1.8e-15
XP_016872253 (OMIM: 601761) PREDICTED: caspase-7 i ( 311) 345 81.5 1.8e-15
XP_006718080 (OMIM: 601761) PREDICTED: caspase-7 i ( 317) 345 81.5 1.9e-15
XP_016872252 (OMIM: 601761) PREDICTED: caspase-7 i ( 322) 345 81.5 1.9e-15
NP_203124 (OMIM: 601761) caspase-7 isoform delta [ ( 336) 345 81.6 1.9e-15
NP_001253986 (OMIM: 601761) caspase-7 isoform e [H ( 388) 345 81.6 2.2e-15
XP_006712859 (OMIM: 601762,603909,605027,613659) P ( 272) 320 76.3 6.2e-14
NP_001221 (OMIM: 601762,603909,605027,613659) casp ( 479) 320 76.4 9.6e-14
XP_005246964 (OMIM: 601762,603909,605027,613659) P ( 521) 320 76.5 1e-13
NP_116759 (OMIM: 601762,603909,605027,613659) casp ( 522) 320 76.5 1e-13
XP_005246951 (OMIM: 114480,114550,211980,601763,60 ( 280) 315 75.2 1.3e-13
XP_011510271 (OMIM: 114480,114550,211980,601763,60 ( 334) 315 75.3 1.5e-13
NP_001073593 (OMIM: 114480,114550,211980,601763,60 ( 464) 315 75.4 1.9e-13
XP_005246949 (OMIM: 114480,114550,211980,601763,60 ( 464) 315 75.4 1.9e-13
NP_203520 (OMIM: 114480,114550,211980,601763,60727 ( 464) 315 75.4 1.9e-13
NP_203519 (OMIM: 114480,114550,211980,601763,60727 ( 479) 315 75.4 2e-13
XP_006712852 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
XP_005246943 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
XP_005246945 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
XP_006712853 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
XP_005246948 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
XP_005246947 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
XP_005246944 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
XP_005246946 (OMIM: 114480,114550,211980,601763,60 ( 479) 315 75.4 2e-13
NP_001219 (OMIM: 114480,114550,211980,601763,60727 ( 496) 315 75.4 2e-13
XP_005246942 (OMIM: 114480,114550,211980,601763,60 ( 523) 315 75.4 2.1e-13
NP_001073594 (OMIM: 114480,114550,211980,601763,60 ( 538) 315 75.4 2.2e-13
NP_001193453 (OMIM: 601762,603909,605027,613659) c ( 455) 291 70.4 6.2e-12
NP_001193471 (OMIM: 601762,603909,605027,613659) c ( 478) 288 69.8 9.9e-12
NP_116756 (OMIM: 601762,603909,605027,613659) casp ( 521) 288 69.8 1.1e-11
NP_116764 (OMIM: 600639) caspase-2 isoform 1 prepr ( 452) 278 67.6 4.1e-11
NP_150635 (OMIM: 147678) caspase-1 isoform gamma [ ( 311) 266 65.0 1.7e-10
XP_016873885 (OMIM: 147678) PREDICTED: caspase-1 i ( 374) 266 65.1 2e-10
XP_016873884 (OMIM: 147678) PREDICTED: caspase-1 i ( 380) 266 65.1 2e-10
NP_001214 (OMIM: 147678) caspase-1 isoform beta pr ( 383) 266 65.1 2e-10
NP_001244048 (OMIM: 147678) caspase-1 isoform beta ( 383) 266 65.1 2e-10
XP_016873883 (OMIM: 147678) PREDICTED: caspase-1 i ( 401) 266 65.1 2.1e-10
XP_016873882 (OMIM: 147678) PREDICTED: caspase-1 i ( 401) 266 65.1 2.1e-10
NP_001244047 (OMIM: 147678) caspase-1 isoform alph ( 404) 266 65.1 2.1e-10
NP_150634 (OMIM: 147678) caspase-1 isoform alpha p ( 404) 266 65.1 2.1e-10
>>NP_036246 (OMIM: 605848) caspase-14 precursor [Homo sa (242 aa)
initn: 1580 init1: 1580 opt: 1580 Z-score: 1796.6 bits: 339.9 E(85289): 2.5e-93
Smith-Waterman score: 1580; 100.0% identity (100.0% similar) in 242 aa overlap (1-242:1-242)
10 20 30 40 50 60
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTAEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 FQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAYRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAYRH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DQKGSCFIQTLVDVFTKRKGHILELLTEVTRRMAEAELVQEGKARKTNPEIQSTLRKRLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DQKGSCFIQTLVDVFTKRKGHILELLTEVTRRMAEAELVQEGKARKTNPEIQSTLRKRLY
190 200 210 220 230 240
pF1KE1 LQ
::
NP_036 LQ
>>XP_011526163 (OMIM: 605848) PREDICTED: caspase-14 isof (230 aa)
initn: 1147 init1: 1147 opt: 1147 Z-score: 1307.3 bits: 249.2 E(85289): 4.5e-66
Smith-Waterman score: 1147; 100.0% identity (100.0% similar) in 174 aa overlap (1-174:1-174)
10 20 30 40 50 60
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTAEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAYRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGPTPFQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DQKGSCFIQTLVDVFTKRKGHILELLTEVTRRMAEAELVQEGKARKTNPEIQSTLRKRLY
XP_011 PLYLPSEAPPNPPLWNSQDTSPTDMIRKAHALSRPWWMCSRRGKDISWNF
190 200 210 220 230
>>NP_116786 (OMIM: 600636) caspase-3 preproprotein [Homo (277 aa)
initn: 224 init1: 104 opt: 356 Z-score: 411.7 bits: 83.8 E(85289): 3.4e-16
Smith-Waterman score: 356; 34.5% identity (64.6% similar) in 223 aa overlap (28-241:63-275)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPT
.: :.. : :.. ::.:..: : : :
NP_116 LDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLT
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE1 AEQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDG--EMVKLENLFEALNNK
:.. : .. .. :... : ::..::.::.. : .: .. :. :.:. .
NP_116 REEIVELMRDVSKEDHSKRSSFVC---VLLSHGEEGIIFGTNGPVDLKKITNFFR---GD
100 110 120 130 140
120 130 140 150 160 170
pF1KE1 NCQALRAKPKVYIIQACRGEQRDPG-ETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEG
:..: .:::..::::::: . : : :: .: . :. . ::. .: :..:::. :
NP_116 RCRSLTGKPKLFIIQACRGTELDCGIETDSGVDDDMAC----HKIPVEADFLYAYSTAPG
150 160 170 180 190 200
180 190 200 210 220
pF1KE1 YIAYRHDQKGSCFIQTLVDVFTKR--KGHILELLTEVTRRMA-EAELVQEG---KARKTN
: ..:... :: :::.: .. . : .....::.:.:..: : : . .:.:
NP_116 YYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQI
210 220 230 240 250 260
230 240
pF1KE1 PEIQSTLRKRLYLQ
: : : : :.::.
NP_116 PCIVSMLTKELYFYH
270
>>XP_011530603 (OMIM: 600636) PREDICTED: caspase-3 isofo (277 aa)
initn: 224 init1: 104 opt: 356 Z-score: 411.7 bits: 83.8 E(85289): 3.4e-16
Smith-Waterman score: 356; 34.5% identity (64.6% similar) in 223 aa overlap (28-241:63-275)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPT
.: :.. : :.. ::.:..: : : :
XP_011 LDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLT
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE1 AEQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDG--EMVKLENLFEALNNK
:.. : .. .. :... : ::..::.::.. : .: .. :. :.:. .
XP_011 REEIVELMRDVSKEDHSKRSSFVC---VLLSHGEEGIIFGTNGPVDLKKITNFFR---GD
100 110 120 130 140
120 130 140 150 160 170
pF1KE1 NCQALRAKPKVYIIQACRGEQRDPG-ETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEG
:..: .:::..::::::: . : : :: .: . :. . ::. .: :..:::. :
XP_011 RCRSLTGKPKLFIIQACRGTELDCGIETDSGVDDDMAC----HKIPVEADFLYAYSTAPG
150 160 170 180 190 200
180 190 200 210 220
pF1KE1 YIAYRHDQKGSCFIQTLVDVFTKR--KGHILELLTEVTRRMA-EAELVQEG---KARKTN
: ..:... :: :::.: .. . : .....::.:.:..: : : . .:.:
XP_011 YYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQI
210 220 230 240 250 260
230 240
pF1KE1 PEIQSTLRKRLYLQ
: : : : :.::.
XP_011 PCIVSMLTKELYFYH
270
>>NP_004337 (OMIM: 600636) caspase-3 preproprotein [Homo (277 aa)
initn: 224 init1: 104 opt: 356 Z-score: 411.7 bits: 83.8 E(85289): 3.4e-16
Smith-Waterman score: 356; 34.5% identity (64.6% similar) in 223 aa overlap (28-241:63-275)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPT
.: :.. : :.. ::.:..: : : :
NP_004 LDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLT
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE1 AEQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDG--EMVKLENLFEALNNK
:.. : .. .. :... : ::..::.::.. : .: .. :. :.:. .
NP_004 REEIVELMRDVSKEDHSKRSSFVC---VLLSHGEEGIIFGTNGPVDLKKITNFFR---GD
100 110 120 130 140
120 130 140 150 160 170
pF1KE1 NCQALRAKPKVYIIQACRGEQRDPG-ETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEG
:..: .:::..::::::: . : : :: .: . :. . ::. .: :..:::. :
NP_004 RCRSLTGKPKLFIIQACRGTELDCGIETDSGVDDDMAC----HKIPVEADFLYAYSTAPG
150 160 170 180 190 200
180 190 200 210 220
pF1KE1 YIAYRHDQKGSCFIQTLVDVFTKR--KGHILELLTEVTRRMA-EAELVQEG---KARKTN
: ..:... :: :::.: .. . : .....::.:.:..: : : . .:.:
NP_004 YYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQI
210 220 230 240 250 260
230 240
pF1KE1 PEIQSTLRKRLYLQ
: : : : :.::.
NP_004 PCIVSMLTKELYFYH
270
>>XP_011538562 (OMIM: 601761) PREDICTED: caspase-7 isofo (270 aa)
initn: 210 init1: 163 opt: 345 Z-score: 399.4 bits: 81.5 E(85289): 1.6e-15
Smith-Waterman score: 345; 30.6% identity (61.6% similar) in 219 aa overlap (29-241:54-268)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTA
:.:...: .:: . ::.: :. . : .
XP_011 TYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSC
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE1 EQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQ
..:. :.: : . . ..: .:..::.:. . :.:: .. ...: . . :.
XP_011 AKMQDLLKK---ASEEDHTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRCK
90 100 110 120 130
120 130 140 150 160 170
pF1KE1 ALRAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAY
.: :::...:::::: . : : . . : . . ::. .: : .:::: :: ..
XP_011 TLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSW
140 150 160 170 180 190
180 190 200 210 220 230
pF1KE1 RHDQKGSCFIQTLVDVFTK--RKGHILELLTEVTRRMAEAELVQEG----KARKTNPEIQ
: .:: :.:.: ... . . .:...::.:. :.:. : . .: : .
XP_011 RSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVV
200 210 220 230 240 250
240
pF1KE1 STLRKRLYLQ
: : :.::.
XP_011 SMLTKELYFSQ
260 270
>>NP_001253987 (OMIM: 601761) caspase-7 isoform f [Homo (278 aa)
initn: 210 init1: 163 opt: 345 Z-score: 399.3 bits: 81.5 E(85289): 1.7e-15
Smith-Waterman score: 345; 30.6% identity (61.6% similar) in 219 aa overlap (29-241:62-276)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTA
:.:...: .:: . ::.: :. . : .
NP_001 TYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSC
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE1 EQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQ
..:. :.: : . . ..: .:..::.:. . :.:: .. ...: . . :.
NP_001 AKMQDLLKK---ASEEDHTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRCK
100 110 120 130 140
120 130 140 150 160 170
pF1KE1 ALRAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAY
.: :::...:::::: . : : . . : . . ::. .: : .:::: :: ..
NP_001 TLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSW
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE1 RHDQKGSCFIQTLVDVFTK--RKGHILELLTEVTRRMAEAELVQEG----KARKTNPEIQ
: .:: :.:.: ... . . .:...::.:. :.:. : . .: : .
NP_001 RSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVV
210 220 230 240 250 260
240
pF1KE1 STLRKRLYLQ
: : :.::.
NP_001 SMLTKELYFSQ
270
>>NP_203125 (OMIM: 601761) caspase-7 isoform alpha precu (303 aa)
initn: 210 init1: 163 opt: 345 Z-score: 398.7 bits: 81.5 E(85289): 1.8e-15
Smith-Waterman score: 345; 30.6% identity (61.6% similar) in 219 aa overlap (29-241:87-301)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTA
:.:...: .:: . ::.: :. . : .
NP_203 TYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSC
60 70 80 90 100 110
60 70 80 90 100 110
pF1KE1 EQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQ
..:. :.: : . . ..: .:..::.:. . :.:: .. ...: . . :.
NP_203 AKMQDLLKK---ASEEDHTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRCK
120 130 140 150 160 170
120 130 140 150 160 170
pF1KE1 ALRAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAY
.: :::...:::::: . : : . . : . . ::. .: : .:::: :: ..
NP_203 TLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSW
180 190 200 210 220 230
180 190 200 210 220 230
pF1KE1 RHDQKGSCFIQTLVDVFTK--RKGHILELLTEVTRRMAEAELVQEG----KARKTNPEIQ
: .:: :.:.: ... . . .:...::.:. :.:. : . .: : .
NP_203 RSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVV
240 250 260 270 280 290
240
pF1KE1 STLRKRLYLQ
: : :.::.
NP_203 SMLTKELYFSQ
300
>>NP_001253985 (OMIM: 601761) caspase-7 isoform alpha pr (303 aa)
initn: 210 init1: 163 opt: 345 Z-score: 398.7 bits: 81.5 E(85289): 1.8e-15
Smith-Waterman score: 345; 30.6% identity (61.6% similar) in 219 aa overlap (29-241:87-301)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTA
:.:...: .:: . ::.: :. . : .
NP_001 TYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSC
60 70 80 90 100 110
60 70 80 90 100 110
pF1KE1 EQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQ
..:. :.: : . . ..: .:..::.:. . :.:: .. ...: . . :.
NP_001 AKMQDLLKK---ASEEDHTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRCK
120 130 140 150 160 170
120 130 140 150 160 170
pF1KE1 ALRAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAY
.: :::...:::::: . : : . . : . . ::. .: : .:::: :: ..
NP_001 TLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSW
180 190 200 210 220 230
180 190 200 210 220 230
pF1KE1 RHDQKGSCFIQTLVDVFTK--RKGHILELLTEVTRRMAEAELVQEG----KARKTNPEIQ
: .:: :.:.: ... . . .:...::.:. :.:. : . .: : .
NP_001 RSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVV
240 250 260 270 280 290
240
pF1KE1 STLRKRLYLQ
: : :.::.
NP_001 SMLTKELYFSQ
300
>>NP_001218 (OMIM: 601761) caspase-7 isoform alpha precu (303 aa)
initn: 210 init1: 163 opt: 345 Z-score: 398.7 bits: 81.5 E(85289): 1.8e-15
Smith-Waterman score: 345; 30.6% identity (61.6% similar) in 219 aa overlap (29-241:87-301)
10 20 30 40 50
pF1KE1 MSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTA
:.:...: .:: . ::.: :. . : .
NP_001 TYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSC
60 70 80 90 100 110
60 70 80 90 100 110
pF1KE1 EQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQ
..:. :.: : . . ..: .:..::.:. . :.:: .. ...: . . :.
NP_001 AKMQDLLKK---ASEEDHTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRCK
120 130 140 150 160 170
120 130 140 150 160 170
pF1KE1 ALRAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAY
.: :::...:::::: . : : . . : . . ::. .: : .:::: :: ..
NP_001 TLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSW
180 190 200 210 220 230
180 190 200 210 220 230
pF1KE1 RHDQKGSCFIQTLVDVFTK--RKGHILELLTEVTRRMAEAELVQEG----KARKTNPEIQ
: .:: :.:.: ... . . .:...::.:. :.:. : . .: : .
NP_001 RSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVV
240 250 260 270 280 290
240
pF1KE1 STLRKRLYLQ
: : :.::.
NP_001 SMLTKELYFSQ
300
242 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:25:11 2016 done: Sun Nov 6 13:25:12 2016
Total Scan time: 6.720 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]