FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3025, 142 aa 1>>>pF1KE3025 142 - 142 aa - 142 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8309+/-0.000273; mu= 14.6061+/- 0.017 mean_var=62.3416+/-12.537, 0's: 0 Z-trim(119.7): 15 B-trim: 143 in 2/49 Lambda= 0.162437 statistics sampled from 33917 (33935) to 33917 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.398), width: 16 Scan time: 5.470 The best scores are: opt bits E(85289) NP_543140 (OMIM: 606855) relaxin-3 preproprotein [ ( 142) 991 239.7 1.2e-63 NP_001298126 (OMIM: 606855) relaxin-3 precursor [H ( 109) 435 109.3 1.7e-24 NP_005469 (OMIM: 606413) insulin-like peptide INSL ( 135) 175 48.4 4.3e-06 >>NP_543140 (OMIM: 606855) relaxin-3 preproprotein [Homo (142 aa) initn: 991 init1: 991 opt: 991 Z-score: 1263.5 bits: 239.7 E(85289): 1.2e-63 Smith-Waterman score: 991; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142) 10 20 30 40 50 60 pF1KE3 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_543 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EAMGDTFPDADADEDSLAGELDEAMGSSEWLALTKSPQAFYRGRPSWQGTPGVLRGSRDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_543 EAMGDTFPDADADEDSLAGELDEAMGSSEWLALTKSPQAFYRGRPSWQGTPGVLRGSRDV 70 80 90 100 110 120 130 140 pF1KE3 LAGLSSSCCKWGCSKSEISSLC :::::::::::::::::::::: NP_543 LAGLSSSCCKWGCSKSEISSLC 130 140 >>NP_001298126 (OMIM: 606855) relaxin-3 precursor [Homo (109 aa) initn: 435 init1: 435 opt: 435 Z-score: 560.9 bits: 109.3 E(85289): 1.7e-24 Smith-Waterman score: 435; 100.0% identity (100.0% similar) in 63 aa overlap (1-63:1-63) 10 20 30 40 50 60 pF1KE3 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EAMGDTFPDADADEDSLAGELDEAMGSSEWLALTKSPQAFYRGRPSWQGTPGVLRGSRDV ::: NP_001 EAMEKNIEAPRSKFTCSRLEKLDSCSVSPAPKCTRSSINKERYLPGCRC 70 80 90 100 >>NP_005469 (OMIM: 606413) insulin-like peptide INSL5 pr (135 aa) initn: 188 init1: 124 opt: 175 Z-score: 230.3 bits: 48.4 E(85289): 4.3e-06 Smith-Waterman score: 175; 31.3% identity (59.5% similar) in 131 aa overlap (19-142:14-135) 10 20 30 40 50 60 pF1KE3 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH :. .:.:. .::::: :.::.::. :..::::: : NP_005 MKGSIFTLFLFSVLFAISEVRSKE-SVRLCGLEYIRTVIYICASSRWRR-----H 10 20 30 40 70 80 90 100 110 pF1KE3 EAMGDTFPDADADEDSLAGELDEAMGSSEWLALTKSPQAFYRGRPS-WQG---TPGVLRG . . .:.:. : . . .: . :: . :.. :. : : : . .. NP_005 Q---EGIPQAQQAETGNSFQLPHKREFSEENPAQNLPKVDASGEDRLWGGQMPTEELWKS 50 60 70 80 90 100 120 130 140 pF1KE3 SR-DVLA--GLSSSCCKWGCSKSEISSLC .. .:.. :.. :: ::: ...:.:: NP_005 KKHSVMSRQDLQTLCCTDGCSMTDLSALC 110 120 130 142 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:27:34 2016 done: Sun Nov 6 04:27:35 2016 Total Scan time: 5.470 Total Display time: -0.050 Function used was FASTA [36.3.4 Apr, 2011]