FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9692, 637 aa 1>>>pF1KE9692 637 - 637 aa - 637 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.3636+/-0.000893; mu= -1.9519+/- 0.053 mean_var=311.0825+/-62.642, 0's: 0 Z-trim(115.9): 57 B-trim: 0 in 0/53 Lambda= 0.072717 statistics sampled from 16426 (16475) to 16426 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.802), E-opt: 0.2 (0.506), width: 16 Scan time: 3.740 The best scores are: opt bits E(32554) CCDS12299.1 C19orf57 gene_id:79173|Hs108|chr19 ( 637) 4416 476.9 3.6e-134 >>CCDS12299.1 C19orf57 gene_id:79173|Hs108|chr19 (637 aa) initn: 4416 init1: 4416 opt: 4416 Z-score: 2522.2 bits: 476.9 E(32554): 3.6e-134 Smith-Waterman score: 4416; 99.8% identity (100.0% similar) in 637 aa overlap (1-637:1-637) 10 20 30 40 50 60 pF1KE9 MTKRKKLRTSGEGLCPPKPLKNPRLGDFYGDPQSSMLGCLHHPEEPEGKLGPVPSTQQHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MTKRKKLRTSGEGLCPPKPLKNPRLGDFYGDPQSSMLGCLHHPEEPEGKLGPVPSTQQHG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 EEPGKAVSSSPDEETGSPCRLLRQPEKEPAPLPPSQNSFGRFVPQFAKSRKTVTRKEEMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 EEPGKAVSSSPDEETGSPCRLLRQPEKEPAPLPPSQNSFGRFVPQFAKSRKTVTRKEEMK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 DEDRGSGAFSLETIAESSAQSPGCQLLVETLGVPLQEATELGDPTQADSARPEQSSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 DEDRGSGAFSLETIAESSAQSPGCQLLVETLGVPLQEATELGDPTQADSARPEQSSQSPV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 QAVPGSGDSQPDDPPDRGTGLSASQRASQDHLSEQGADDSKPETDRVPGDGGQKEHLPSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 QAVPGSGDSQPDDPPDRGTGLSASQRASQDHLSEQGADDSKPETDRVPGDGGQKEHLPSI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 DSEGEKPDRGAPQEGGAQRTAGAGLPGGPQEEGDGVPCTPASAPTSGPAPGLGPASWCLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 DSEGEKPDRGAPQEGGAQRTAGAGLPGGPQEEGDGVPCTPASAPTSGPAPGLGPASWCLE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 PGSVAQGSPDPQQTPSRMGREGEGTHSSLGCSSLGMVVIADLSTDPTELEERALEVAGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PGSVAQGSPDPQQTPSRMGREGEGTHSSLGCSSLGMVVIADLSTDPTELEERALEVAGPD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 GQASAISPASPRRKAADGGHRRALPGCTSLTGETTGESGEAGQDGKPPGDVLVGPTASLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 GQASAISPASPRRKAADGGHRRALPGCTSLTGETTGESGEAGQDGKPPGDVLVGPTASLA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 LAPGSGESMMGAGDSGHASPDTGPCVNQKQEPGPAQEEAELGGQNLERDLEGFRVSPQAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LAPGSGESMMGAGDSGHASPDTGPCVNQKQEPGPAQEEAELGGQNLERDLEGFRVSPQAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 VVLEHREIADEPLQEPGAQQGIPDTTSELAGQRDHLPHSADQGTWADSLAVELDFLLDSQ ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 VVLEHREIADDPLQEPGAQQGIPDTTSELAGQRDHLPHSADQGTWADSLAVELDFLLDSQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 IQDALDASDFEAPPEQLFPSGNKPGPCWPGPSSHANGDPVAVAKAQPSRLIMGTHRDLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 IQDALDASDFEAPPEQLFPSGNKPGPCWPGPSSHANGDPVAVAKAQPSRLIMGTHRDLEA 550 560 570 580 590 600 610 620 630 pF1KE9 FKRLNYRKTKLGGKAPLPYPSKGPGNIPRGDPPWREL ::::::::::::::::::::::::::::::::::::: CCDS12 FKRLNYRKTKLGGKAPLPYPSKGPGNIPRGDPPWREL 610 620 630 637 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:43:12 2016 done: Tue Nov 8 10:43:13 2016 Total Scan time: 3.740 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]